RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 PPATQ06203 517 aa11.12□□□□□ -0.63
NPLOC4-208ENST00000572351 MKRN3Q13064 507 aaKnown RBP11.12□□□□□ -0.63
NPLOC4-208ENST00000572351 CCDC178Q5BJE1 867 aa11.12□□□□□ -0.63
NPLOC4-208ENST00000572351 CHST3Q7LGC8 479 aa11.12□□□□□ -0.63
NPLOC4-208ENST00000572351 CCDC84Q86UT8 332 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-208ENST00000572351 ZSCAN10Q96SZ4 725 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-208ENST00000572351 TBC1D2Q9BYX2 928 aa11.12□□□□□ -0.63
NPLOC4-208ENST00000572351 SH2D4AQ9H788 454 aa11.12□□□□□ -0.63
NPLOC4-208ENST00000572351 ARHGEF10LQ9HCE6 1279 aa11.12□□□□□ -0.63
NPLOC4-208ENST00000572351 ZSWIM5Q9P217 1185 aa11.12□□□□□ -0.63
NPLOC4-208ENST00000572351 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.12□□□□□ -0.63
NPLOC4-208ENST00000572351 ECM29Q5VYK3 1845 aa11.12□□□□□ -0.63
NPLOC4-208ENST00000572351 PAPPA2Q9BXP8 1791 aa11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 IFIT3O14879 490 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 PRC1O43663 620 aa11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 RAD21O60216 631 aa11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 NMT2O60551 498 aa11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 TTLL1O95922 423 aa11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 EEF2P13639 858 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 SPP2Q13103 211 aa11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 ADCK5Q3MIX3 580 aa11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 TMEM67Q5HYA8 995 aa11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 DHX32Q7L7V1 743 aaKnown RBP11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 CLEC10AQ8IUN9 316 aa11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 MB21D2Q8IYB1 491 aaPredicted RBP11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 ZNF280CQ8ND82 737 aa11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 CCDC102AQ96A19 550 aa11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 CEP95Q96GE4 821 aa11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 CYP46A1Q9Y6A2 500 aa11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 PLIN4Q96Q06 1357 aa11.11□□□□□ -0.63
NPLOC4-208ENST00000572351 TNKSO95271 1327 aa11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 GUCY1A2P33402 732 aa11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 ECE1P42892 770 aa11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 RBM25P49756 843 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 PPIL2Q13356 520 aa11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 MTMR2Q13614 643 aa11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 DEFB115Q30KQ5 88 aa11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 NFXL1Q6ZNB6 911 aa11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 CYB5R4Q7L1T6 521 aa11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 RASAL3Q86YV0 1011 aa11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 WNK4Q96J92 1243 aa11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 HHIPL1Q96JK4 782 aa11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 UPF3BQ9BZI7 483 aaKnown RBP11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 IL17RBQ9NRM6 502 aa11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 TCP11L1Q9NUJ3 509 aa11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 MTMR4Q9NYA4 1195 aa11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 CLIP2Q9UDT6 1046 aa11.1□□□□□ -0.63
NPLOC4-208ENST00000572351 IGKV6D-41A0A0C4DH26 115 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 RASSF10A6NK89 507 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 USP17L10C9JJH3 530 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 IRF6O14896 467 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 ZBTB48P10074 688 aaPredicted RBP11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 TOP1P11387 765 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 CPA1P15085 419 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 HSPA6P17066 643 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 RPS6KB1P23443 525 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 USP14P54578 494 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 SNAPC2Q13487 334 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 WTAPQ15007 396 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 ZYXQ15942 572 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 IFIT1BQ5T764 474 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 CYP4F22Q6NT55 531 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 RUFY3Q7L099 469 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 DGKHQ86XP1 1220 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 LRRC47Q8N1G4 583 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 NKX2-3Q8TAU0 364 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 ACER1Q8TDN7 264 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 TMEM87BQ96K49 555 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 TCEANC2Q96MN5 208 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 TTC14Q96N46 770 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 TBC1D32Q96NH3 1257 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 WDR18Q9BV38 432 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 LRRC2Q9BYS8 371 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 TM6SF1Q9BZW5 370 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 KAT14Q9H8E8 782 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 ZSWIM6Q9HCJ5 1215 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 GOPCQ9HD26 462 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 TMOD4Q9NZQ9 345 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 NYAP2Q9P242 653 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 ISY1Q9ULR0 285 aaKnown RBP11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 MTMR7Q9Y216 660 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 WDR19Q8NEZ3 1342 aa11.09□□□□□ -0.63
NPLOC4-208ENST00000572351 FOCADQ5VW36 1801 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 CCDC69A6NI79 296 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 CXCL11O14625 94 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 SLC10A3P09131 477 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 GTF2A2P52657 109 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 BACE1P56817 501 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 ANTXR2P58335 489 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 HTRA3P83110 453 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 SPRYD7Q5W111 196 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 USP17L2Q6R6M4 530 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 SYNE3Q6ZMZ3 975 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 Q6ZUG5 572 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 ENAHQ8N8S7 591 aaPredicted RBP11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 CAPNS2Q96L46 248 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 TMEM47Q9BQJ4 181 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 MTA3Q9BTC8 594 aa11.08□□□□□ -0.64
NPLOC4-208ENST00000572351 PDRG1Q9NUG6 133 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms