RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 FCGRTP55899 365 aa24.12■■□□□ 1.45
NUP88-204ENST00000572290 IRX3P78415 501 aaPredicted RBP24.12■■□□□ 1.45
NUP88-204ENST00000572290 ZYXQ15942 572 aaKnown RBP24.12■■□□□ 1.45
NUP88-204ENST00000572290 TMEM179Q6ZVK1 233 aa24.12■■□□□ 1.45
NUP88-204ENST00000572290 ANKRD13CQ8N6S4 541 aa24.12■■□□□ 1.45
NUP88-204ENST00000572290 C12orf42Q96LP6 360 aa24.12■■□□□ 1.45
NUP88-204ENST00000572290 CCDC17Q96LX7 622 aa24.12■■□□□ 1.45
NUP88-204ENST00000572290 KIAA1683Q9H0B3 1180 aa24.12■■□□□ 1.45
NUP88-204ENST00000572290 AKR1B1P15121 316 aa24.11■■□□□ 1.45
NUP88-204ENST00000572290 TDO2P48775 406 aa24.11■■□□□ 1.45
NUP88-204ENST00000572290 SOX10P56693 466 aa24.11■■□□□ 1.45
NUP88-204ENST00000572290 EPB41L4AQ9HCS5 686 aaPredicted RBP24.11■■□□□ 1.45
NUP88-204ENST00000572290 ATAD5Q96QE3 1844 aa24.1■■□□□ 1.45
NUP88-204ENST00000572290 MINDY4BA8MYZ0 360 aa24.1■■□□□ 1.45
NUP88-204ENST00000572290 FAM110CQ1W6H9 321 aa24.1■■□□□ 1.45
NUP88-204ENST00000572290 PLEKHM2Q8IWE5 1019 aa24.1■■□□□ 1.45
NUP88-204ENST00000572290 NACAP1Q9BZK3 213 aa24.1■■□□□ 1.45
NUP88-204ENST00000572290 SRRDQ9UH36 339 aa24.1■■□□□ 1.45
NUP88-204ENST00000572290 RGS19P49795 217 aa24.09■■□□□ 1.45
NUP88-204ENST00000572290 IFNL3Q8IZI9 196 aa24.09■■□□□ 1.45
NUP88-204ENST00000572290 P2RX7Q99572 595 aaKnown RBP24.09■■□□□ 1.45
NUP88-204ENST00000572290 OSBPL3Q9H4L5 887 aa24.09■■□□□ 1.45
NUP88-204ENST00000572290 LOC285556D6RIA3 1793 aa24.08■■□□□ 1.45
NUP88-204ENST00000572290 TRIM6-TRIM34B2RNG4 842 aa24.08■■□□□ 1.45
NUP88-204ENST00000572290 TICAM2Q86XR7 235 aa24.08■■□□□ 1.45
NUP88-204ENST00000572290 ARMC5Q96C12 935 aa24.08■■□□□ 1.45
NUP88-204ENST00000572290 A0A1W2PRG0 241 aa24.07■■□□□ 1.44
NUP88-204ENST00000572290 USP17L15C9J2P7 530 aa24.07■■□□□ 1.44
NUP88-204ENST00000572290 USP17L13C9JLJ4 530 aa24.07■■□□□ 1.44
NUP88-204ENST00000572290 USP17L11C9JVI0 530 aa24.07■■□□□ 1.44
NUP88-204ENST00000572290 USP17L18D6R9N7 530 aa24.07■■□□□ 1.44
NUP88-204ENST00000572290 USP17L22D6RA61 530 aa24.07■■□□□ 1.44
NUP88-204ENST00000572290 USP17L17D6RBQ6 530 aa24.07■■□□□ 1.44
NUP88-204ENST00000572290 USP17L19D6RCP7 530 aa24.07■■□□□ 1.44
NUP88-204ENST00000572290 USP17L20D6RJB6 530 aa24.07■■□□□ 1.44
NUP88-204ENST00000572290 HERVK_113P62684 666 aa24.07■■□□□ 1.44
NUP88-204ENST00000572290 USP17L24Q0WX57 530 aa24.07■■□□□ 1.44
NUP88-204ENST00000572290 SLC9C1Q4G0N8 1177 aa24.07■■□□□ 1.44
NUP88-204ENST00000572290 RILPL2Q969X0 211 aa24.07■■□□□ 1.44
NUP88-204ENST00000572290 PTPRFP10586 1907 aa24.07■■□□□ 1.44
NUP88-204ENST00000572290 MYPNQ86TC9 1320 aa24.07■■□□□ 1.44
NUP88-204ENST00000572290 MYH7P12883 1935 aa24.06■■□□□ 1.44
NUP88-204ENST00000572290 ROBO3Q96MS0 1386 aa24.06■■□□□ 1.44
NUP88-204ENST00000572290 TNPO2O14787 897 aaKnown RBP24.06■■□□□ 1.44
NUP88-204ENST00000572290 VCAM1P19320 739 aa24.06■■□□□ 1.44
NUP88-204ENST00000572290 ICA1Q05084 483 aa24.06■■□□□ 1.44
NUP88-204ENST00000572290 CCDC129Q6ZRS4 1044 aa24.06■■□□□ 1.44
NUP88-204ENST00000572290 NBPF11Q86T75 865 aa24.06■■□□□ 1.44
NUP88-204ENST00000572290 STK11IPQ8N1F8 1099 aa24.06■■□□□ 1.44
NUP88-204ENST00000572290 NAPBQ9H115 298 aa24.06■■□□□ 1.44
NUP88-204ENST00000572290 MKNK2Q9HBH9 465 aa24.06■■□□□ 1.44
NUP88-204ENST00000572290 ARHGEF10LQ9HCE6 1279 aa24.06■■□□□ 1.44
NUP88-204ENST00000572290 HELLSQ9NRZ9 838 aa24.06■■□□□ 1.44
NUP88-204ENST00000572290 MORF4L1Q9UBU8 362 aa24.06■■□□□ 1.44
NUP88-204ENST00000572290 PRKCZQ05513 592 aa24.05■■□□□ 1.44
NUP88-204ENST00000572290 RAET1EQ8TD07 263 aa24.05■■□□□ 1.44
NUP88-204ENST00000572290 GTF3C2Q8WUA4 911 aaPredicted RBP24.05■■□□□ 1.44
NUP88-204ENST00000572290 SH2D4AQ9H788 454 aa24.05■■□□□ 1.44
NUP88-204ENST00000572290 CATSPERGQ6ZRH7 1159 aa24.04■■□□□ 1.44
NUP88-204ENST00000572290 CLEC10AQ8IUN9 316 aa24.04■■□□□ 1.44
NUP88-204ENST00000572290 SIAH1Q8IUQ4 282 aa24.04■■□□□ 1.44
NUP88-204ENST00000572290 ZNF287Q9HBT7 754 aa24.04■■□□□ 1.44
NUP88-204ENST00000572290 RASA1P20936 1047 aa24.03■■□□□ 1.44
NUP88-204ENST00000572290 SH3TC2Q8TF17 1288 aa24.03■■□□□ 1.44
NUP88-204ENST00000572290 ZNF333Q96JL9 665 aa24.03■■□□□ 1.44
NUP88-204ENST00000572290 FAM227BQ96M60 508 aa24.03■■□□□ 1.44
NUP88-204ENST00000572290 RPAP3Q9H6T3 665 aaPredicted RBP24.03■■□□□ 1.44
NUP88-204ENST00000572290 KANSL2Q9H9L4 492 aa24.03■■□□□ 1.44
NUP88-204ENST00000572290 GABRQQ9UN88 632 aa24.03■■□□□ 1.44
NUP88-204ENST00000572290 TMX2Q9Y320 296 aa24.03■■□□□ 1.44
NUP88-204ENST00000572290 A0A0D9SFI3 127 aa24.02■■□□□ 1.44
NUP88-204ENST00000572290 MCMDC2Q4G0Z9 681 aa24.02■■□□□ 1.44
NUP88-204ENST00000572290 GPRC5AQ8NFJ5 357 aa24.02■■□□□ 1.44
NUP88-204ENST00000572290 COA7Q96BR5 231 aa24.02■■□□□ 1.44
NUP88-204ENST00000572290 TXNRD2Q9NNW7 524 aa24.02■■□□□ 1.44
NUP88-204ENST00000572290 RBPJLQ9UBG7 517 aa24.02■■□□□ 1.44
NUP88-204ENST00000572290 FOXP2O15409 715 aa24.01■■□□□ 1.43
NUP88-204ENST00000572290 SLC3A2P08195 630 aaKnown RBP24.01■■□□□ 1.43
NUP88-204ENST00000572290 EEF2P13639 858 aaKnown RBP24.01■■□□□ 1.43
NUP88-204ENST00000572290 ATP2B2Q01814 1243 aa24.01■■□□□ 1.43
NUP88-204ENST00000572290 MLLT1Q03111 559 aaPredicted RBP24.01■■□□□ 1.43
NUP88-204ENST00000572290 PPARAQ07869 468 aa24.01■■□□□ 1.43
NUP88-204ENST00000572290 NMIQ13287 307 aaPredicted RBP24.01■■□□□ 1.43
NUP88-204ENST00000572290 ZNF444Q8N0Y2 327 aaPredicted RBP24.01■■□□□ 1.43
NUP88-204ENST00000572290 PAGR1Q9BTK6 254 aa24.01■■□□□ 1.43
NUP88-204ENST00000572290 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.01■■□□□ 1.43
NUP88-204ENST00000572290 ZSWIM8A7E2V4 1837 aa24■■□□□ 1.43
NUP88-204ENST00000572290 PEX10O60683 326 aa24■■□□□ 1.43
NUP88-204ENST00000572290 PRDM1O75626 825 aa24■■□□□ 1.43
NUP88-204ENST00000572290 GRK4P32298 578 aa24■■□□□ 1.43
NUP88-204ENST00000572290 FLT3LGP49771 235 aa24■■□□□ 1.43
NUP88-204ENST00000572290 VPS53Q5VIR6 699 aa24■■□□□ 1.43
NUP88-204ENST00000572290 LPAR1Q92633 364 aa24■■□□□ 1.43
NUP88-204ENST00000572290 VCPKMTQ9H867 229 aa24■■□□□ 1.43
NUP88-204ENST00000572290 SDSP20132 328 aa23.99■■□□□ 1.43
NUP88-204ENST00000572290 PDE4AP27815 886 aa23.99■■□□□ 1.43
NUP88-204ENST00000572290 ERVK-9P63128 1117 aa23.99■■□□□ 1.43
NUP88-204ENST00000572290 ERVK-24P63145 666 aa23.99■■□□□ 1.43
NUP88-204ENST00000572290 PDE4BQ07343 736 aa23.99■■□□□ 1.43
NUP88-204ENST00000572290 KIAA1755Q5JYT7 1200 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms