RNA–Protein interactions for RNA: ENST00000571976.1

LITAF-210, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-210ENST00000571976 RAD50Q92878 1312 aa19.25■□□□□ 0.67
LITAF-210ENST00000571976 PTPRFP10586 1907 aa19.24■□□□□ 0.67
LITAF-210ENST00000571976 MYH8P13535 1937 aa19.24■□□□□ 0.67
LITAF-210ENST00000571976 GPR25O00155 361 aa19.24■□□□□ 0.67
LITAF-210ENST00000571976 RASA1P20936 1047 aa19.24■□□□□ 0.67
LITAF-210ENST00000571976 ZNF444Q8N0Y2 327 aaPredicted RBP19.24■□□□□ 0.67
LITAF-210ENST00000571976 FEZ1Q99689 392 aa19.24■□□□□ 0.67
LITAF-210ENST00000571976 DSCC1Q9BVC3 393 aa19.24■□□□□ 0.67
LITAF-210ENST00000571976 USP17L2Q6R6M4 530 aa19.23■□□□□ 0.67
LITAF-210ENST00000571976 KIAA1683Q9H0B3 1180 aa19.23■□□□□ 0.67
LITAF-210ENST00000571976 TLR2O60603 784 aa19.22■□□□□ 0.67
LITAF-210ENST00000571976 PRDM1O75626 825 aa19.22■□□□□ 0.67
LITAF-210ENST00000571976 USP14P54578 494 aa19.22■□□□□ 0.67
LITAF-210ENST00000571976 CTDSPL2Q05D32 466 aa19.22■□□□□ 0.67
LITAF-210ENST00000571976 PABPC4Q13310 644 aaKnown RBP eCLIP19.22■□□□□ 0.67
LITAF-210ENST00000571976 ACER1Q8TDN7 264 aa19.22■□□□□ 0.67
LITAF-210ENST00000571976 ZNF296Q8WUU4 475 aaPredicted RBP19.22■□□□□ 0.67
LITAF-210ENST00000571976 PARK7Q99497 189 aaKnown RBP19.22■□□□□ 0.67
LITAF-210ENST00000571976 IL25Q9H293 177 aa19.22■□□□□ 0.67
LITAF-210ENST00000571976 KANSL2Q9H9L4 492 aa19.22■□□□□ 0.67
LITAF-210ENST00000571976 FKTNO75072 461 aa19.21■□□□□ 0.67
LITAF-210ENST00000571976 ICA1Q05084 483 aa19.21■□□□□ 0.67
LITAF-210ENST00000571976 DGKZQ13574 1117 aa19.21■□□□□ 0.67
LITAF-210ENST00000571976 TREML2Q5T2D2 321 aa19.21■□□□□ 0.67
LITAF-210ENST00000571976 C12orf42Q96LP6 360 aa19.21■□□□□ 0.67
LITAF-210ENST00000571976 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.21■□□□□ 0.67
LITAF-210ENST00000571976 SH2D4AQ9H788 454 aa19.21■□□□□ 0.67
LITAF-210ENST00000571976 ARHGEF10LQ9HCE6 1279 aa19.21■□□□□ 0.67
LITAF-210ENST00000571976 EMILIN3Q9NT22 766 aa19.21■□□□□ 0.67
LITAF-210ENST00000571976 CTNNA3Q9UI47 895 aa19.21■□□□□ 0.67
LITAF-210ENST00000571976 PNMA3Q9UL41 463 aa19.21■□□□□ 0.67
LITAF-210ENST00000571976 LOC285556D6RIA3 1793 aa19.2■□□□□ 0.66
LITAF-210ENST00000571976 SGSM2O43147 1006 aa19.2■□□□□ 0.66
LITAF-210ENST00000571976 FGRP09769 529 aa19.2■□□□□ 0.66
LITAF-210ENST00000571976 ZYXQ15942 572 aaKnown RBP19.2■□□□□ 0.66
LITAF-210ENST00000571976 COL13A1Q5TAT6 717 aaPredicted RBP19.2■□□□□ 0.66
LITAF-210ENST00000571976 SIAH1Q8IUQ4 282 aa19.2■□□□□ 0.66
LITAF-210ENST00000571976 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.2■□□□□ 0.66
LITAF-210ENST00000571976 A0A1W2PRG0 241 aa19.19■□□□□ 0.66
LITAF-210ENST00000571976 ZNF213O14771 459 aa19.19■□□□□ 0.66
LITAF-210ENST00000571976 CYP2C8P10632 490 aa19.19■□□□□ 0.66
LITAF-210ENST00000571976 OSBPP22059 807 aa19.19■□□□□ 0.66
LITAF-210ENST00000571976 HOXA7P31268 230 aaPredicted RBP19.19■□□□□ 0.66
LITAF-210ENST00000571976 TMX2Q9Y320 296 aa19.19■□□□□ 0.66
LITAF-210ENST00000571976 ORC4O43929 436 aa19.18■□□□□ 0.66
LITAF-210ENST00000571976 TSPY3P0CV98 308 aa19.18■□□□□ 0.66
LITAF-210ENST00000571976 TSPY8P0CW00 308 aa19.18■□□□□ 0.66
LITAF-210ENST00000571976 PCP11498 1178 aaKnown RBP19.18■□□□□ 0.66
LITAF-210ENST00000571976 EEF2P13639 858 aaKnown RBP19.18■□□□□ 0.66
LITAF-210ENST00000571976 HAND2P61296 217 aa19.18■□□□□ 0.66
LITAF-210ENST00000571976 TFAP4Q01664 338 aa19.18■□□□□ 0.66
LITAF-210ENST00000571976 SP3Q02447 781 aa19.18■□□□□ 0.66
LITAF-210ENST00000571976 C17orf99Q6UX52 265 aa19.18■□□□□ 0.66
LITAF-210ENST00000571976 NEDD1Q8NHV4 660 aa19.18■□□□□ 0.66
LITAF-210ENST00000571976 RNF41Q9H4P4 317 aaPredicted RBP19.18■□□□□ 0.66
LITAF-210ENST00000571976 CASP8AP2Q9UKL3 1982 aa19.18■□□□□ 0.66
LITAF-210ENST00000571976 IGKV6D-41A0A0C4DH26 115 aa19.17■□□□□ 0.66
LITAF-210ENST00000571976 TSPY2A6NKD2 308 aa19.17■□□□□ 0.66
LITAF-210ENST00000571976 ATP2B2Q01814 1243 aa19.17■□□□□ 0.66
LITAF-210ENST00000571976 IMMTQ16891 758 aaKnown RBP19.17■□□□□ 0.66
LITAF-210ENST00000571976 FAM47AQ5JRC9 791 aa19.17■□□□□ 0.66
LITAF-210ENST00000571976 AKNAD1Q5T1N1 836 aa19.17■□□□□ 0.66
LITAF-210ENST00000571976 CASC1Q6TDU7 716 aa19.17■□□□□ 0.66
LITAF-210ENST00000571976 CLEC10AQ8IUN9 316 aa19.17■□□□□ 0.66
LITAF-210ENST00000571976 SMCR8Q8TEV9 937 aaPredicted RBP19.17■□□□□ 0.66
LITAF-210ENST00000571976 STAG1Q8WVM7 1258 aa19.17■□□□□ 0.66
LITAF-210ENST00000571976 ASCC2Q9H1I8 757 aaPredicted RBP19.17■□□□□ 0.66
LITAF-210ENST00000571976 INCENPQ9NQS7 918 aa19.17■□□□□ 0.66
LITAF-210ENST00000571976 NYAP2Q9P242 653 aa19.17■□□□□ 0.66
LITAF-210ENST00000571976 CPA4Q9UI42 421 aa19.17■□□□□ 0.66
LITAF-210ENST00000571976 ADGRA2Q96PE1 1338 aa19.17■□□□□ 0.66
LITAF-210ENST00000571976 PLIN4Q96Q06 1357 aa19.17■□□□□ 0.66
LITAF-210ENST00000571976 USP17L15C9J2P7 530 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 USP17L13C9JLJ4 530 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 USP17L11C9JVI0 530 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 USP17L18D6R9N7 530 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 USP17L22D6RA61 530 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 USP17L17D6RBQ6 530 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 USP17L19D6RCP7 530 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 USP17L20D6RJB6 530 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 VCAM1P19320 739 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 IRX3P78415 501 aaPredicted RBP19.16■□□□□ 0.66
LITAF-210ENST00000571976 USP17L24Q0WX57 530 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 PPP4R3BQ5MIZ7 849 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 MFSD6Q6ZSS7 791 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 LPAR1Q92633 364 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 ERO1AQ96HE7 468 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 ESYT1Q9BSJ8 1104 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 VCPKMTQ9H867 229 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 TOMM22Q9NS69 142 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 TACC3Q9Y6A5 838 aa19.16■□□□□ 0.66
LITAF-210ENST00000571976 U3KPZ7 1027 aaPredicted RBP19.16■□□□□ 0.66
LITAF-210ENST00000571976 GREB1LQ9C091 1923 aaPredicted RBP19.15■□□□□ 0.66
LITAF-210ENST00000571976 RANBP6O60518 1105 aaKnown RBP19.15■□□□□ 0.66
LITAF-210ENST00000571976 CDC45O75419 566 aa19.15■□□□□ 0.66
LITAF-210ENST00000571976 NT5C2P49902 561 aa19.15■□□□□ 0.66
LITAF-210ENST00000571976 KIAA1211Q6ZU35 1233 aa19.15■□□□□ 0.66
LITAF-210ENST00000571976 CEP95Q96GE4 821 aa19.15■□□□□ 0.66
LITAF-210ENST00000571976 NBPF3Q9H094 633 aa19.15■□□□□ 0.66
LITAF-210ENST00000571976 MTMR4Q9NYA4 1195 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms