RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 CLEC10AQ8IUN9 316 aa17.45■□□□□ 0.38
LITAF-208ENST00000571627 TNRC18O15417 2968 aaPredicted RBP17.44■□□□□ 0.38
LITAF-208ENST00000571627 IRX3P78415 501 aaPredicted RBP17.44■□□□□ 0.38
LITAF-208ENST00000571627 NUCB1Q02818 461 aa17.44■□□□□ 0.38
LITAF-208ENST00000571627 C16orf86Q6ZW13 317 aa17.44■□□□□ 0.38
LITAF-208ENST00000571627 STK11IPQ8N1F8 1099 aa17.44■□□□□ 0.38
LITAF-208ENST00000571627 ARPP21Q9UBL0 812 aaPredicted RBP17.44■□□□□ 0.38
LITAF-208ENST00000571627 RBBP6Q7Z6E9 1792 aaKnown RBP17.43■□□□□ 0.38
LITAF-208ENST00000571627 KIAA0100Q14667 2235 aaKnown RBP17.43■□□□□ 0.38
LITAF-208ENST00000571627 PEX10O60683 326 aa17.43■□□□□ 0.38
LITAF-208ENST00000571627 GNRH1P01148 92 aa17.43■□□□□ 0.38
LITAF-208ENST00000571627 APPP05067 770 aa17.43■□□□□ 0.38
LITAF-208ENST00000571627 FCGRTP55899 365 aa17.43■□□□□ 0.38
LITAF-208ENST00000571627 SLC9C1Q4G0N8 1177 aa17.43■□□□□ 0.38
LITAF-208ENST00000571627 CCDC129Q6ZRS4 1044 aa17.43■□□□□ 0.38
LITAF-208ENST00000571627 EVI5LQ96CN4 794 aa17.43■□□□□ 0.38
LITAF-208ENST00000571627 P2RX7Q99572 595 aaKnown RBP17.43■□□□□ 0.38
LITAF-208ENST00000571627 KIAA1683Q9H0B3 1180 aa17.43■□□□□ 0.38
LITAF-208ENST00000571627 SRRDQ9UH36 339 aa17.43■□□□□ 0.38
LITAF-208ENST00000571627 MYPNQ86TC9 1320 aa17.43■□□□□ 0.38
LITAF-208ENST00000571627 GREB1LQ9C091 1923 aaPredicted RBP17.43■□□□□ 0.38
LITAF-208ENST00000571627 A0A1W2PRG0 241 aa17.42■□□□□ 0.38
LITAF-208ENST00000571627 MINDY4BA8MYZ0 360 aa17.42■□□□□ 0.38
LITAF-208ENST00000571627 HOXA7P31268 230 aaPredicted RBP17.42■□□□□ 0.38
LITAF-208ENST00000571627 TDO2P48775 406 aa17.42■□□□□ 0.38
LITAF-208ENST00000571627 RGS19P49795 217 aa17.42■□□□□ 0.38
LITAF-208ENST00000571627 FAM110CQ1W6H9 321 aa17.42■□□□□ 0.38
LITAF-208ENST00000571627 SBK1Q52WX2 424 aa17.42■□□□□ 0.38
LITAF-208ENST00000571627 GIMAP6Q6P9H5 292 aa17.42■□□□□ 0.38
LITAF-208ENST00000571627 TMEM179Q6ZVK1 233 aa17.42■□□□□ 0.38
LITAF-208ENST00000571627 SH3TC2Q8TF17 1288 aa17.42■□□□□ 0.38
LITAF-208ENST00000571627 ARMC5Q96C12 935 aa17.42■□□□□ 0.38
LITAF-208ENST00000571627 C12orf42Q96LP6 360 aa17.42■□□□□ 0.38
LITAF-208ENST00000571627 GABRQQ9UN88 632 aa17.42■□□□□ 0.38
LITAF-208ENST00000571627 MYCP01106 439 aaPredicted RBP17.41■□□□□ 0.38
LITAF-208ENST00000571627 GNAT2P19087 354 aa17.41■□□□□ 0.38
LITAF-208ENST00000571627 VCAM1P19320 739 aa17.41■□□□□ 0.38
LITAF-208ENST00000571627 GCLCP48506 637 aaPredicted RBP17.41■□□□□ 0.38
LITAF-208ENST00000571627 USP14P54578 494 aa17.41■□□□□ 0.38
LITAF-208ENST00000571627 HERVK_113P62684 666 aa17.41■□□□□ 0.38
LITAF-208ENST00000571627 PRKCZQ05513 592 aa17.41■□□□□ 0.38
LITAF-208ENST00000571627 PLEKHM2Q8IWE5 1019 aa17.41■□□□□ 0.38
LITAF-208ENST00000571627 ROBO3Q96MS0 1386 aa17.4■□□□□ 0.38
LITAF-208ENST00000571627 BRCA2P51587 3418 aa17.4■□□□□ 0.38
LITAF-208ENST00000571627 TRIM6-TRIM34B2RNG4 842 aa17.4■□□□□ 0.38
LITAF-208ENST00000571627 PATL2C9JE40 543 aaKnown RBP17.4■□□□□ 0.38
LITAF-208ENST00000571627 TNPO2O14787 897 aaKnown RBP17.4■□□□□ 0.38
LITAF-208ENST00000571627 HOXD10P28358 340 aa17.4■□□□□ 0.38
LITAF-208ENST00000571627 PRMT2P55345 433 aa17.4■□□□□ 0.38
LITAF-208ENST00000571627 ICA1Q05084 483 aa17.4■□□□□ 0.38
LITAF-208ENST00000571627 IFNL3Q8IZI9 196 aa17.4■□□□□ 0.38
LITAF-208ENST00000571627 RAET1EQ8TD07 263 aa17.4■□□□□ 0.38
LITAF-208ENST00000571627 ZNF333Q96JL9 665 aa17.4■□□□□ 0.38
LITAF-208ENST00000571627 CCDC17Q96LX7 622 aa17.4■□□□□ 0.38
LITAF-208ENST00000571627 TXNRD2Q9NNW7 524 aa17.4■□□□□ 0.38
LITAF-208ENST00000571627 TAOK2Q9UL54 1235 aa17.4■□□□□ 0.38
LITAF-208ENST00000571627 PLXNB2O15031 1838 aa17.4■□□□□ 0.38
LITAF-208ENST00000571627 POTEFA5A3E0 1075 aa17.39■□□□□ 0.37
LITAF-208ENST00000571627 MLLT1Q03111 559 aaPredicted RBP17.39■□□□□ 0.37
LITAF-208ENST00000571627 KIAA1755Q5JYT7 1200 aa17.39■□□□□ 0.37
LITAF-208ENST00000571627 POTEEQ6S8J3 1075 aa17.39■□□□□ 0.37
LITAF-208ENST00000571627 SIAH1Q8IUQ4 282 aa17.39■□□□□ 0.37
LITAF-208ENST00000571627 RILPL2Q969X0 211 aa17.39■□□□□ 0.37
LITAF-208ENST00000571627 FAM227BQ96M60 508 aa17.39■□□□□ 0.37
LITAF-208ENST00000571627 PAGR1Q9BTK6 254 aa17.39■□□□□ 0.37
LITAF-208ENST00000571627 RPAP3Q9H6T3 665 aaPredicted RBP17.39■□□□□ 0.37
LITAF-208ENST00000571627 MORF4L1Q9UBU8 362 aa17.39■□□□□ 0.37
LITAF-208ENST00000571627 PARP14Q460N5 1801 aa17.39■□□□□ 0.37
LITAF-208ENST00000571627 RLFQ13129 1914 aa17.39■□□□□ 0.37
LITAF-208ENST00000571627 MYH4Q9Y623 1939 aa17.39■□□□□ 0.37
LITAF-208ENST00000571627 A0A0D9SFI3 127 aa17.38■□□□□ 0.37
LITAF-208ENST00000571627 USP17L15C9J2P7 530 aa17.38■□□□□ 0.37
LITAF-208ENST00000571627 USP17L13C9JLJ4 530 aa17.38■□□□□ 0.37
LITAF-208ENST00000571627 USP17L11C9JVI0 530 aa17.38■□□□□ 0.37
LITAF-208ENST00000571627 USP17L18D6R9N7 530 aa17.38■□□□□ 0.37
LITAF-208ENST00000571627 USP17L22D6RA61 530 aa17.38■□□□□ 0.37
LITAF-208ENST00000571627 USP17L17D6RBQ6 530 aa17.38■□□□□ 0.37
LITAF-208ENST00000571627 USP17L19D6RCP7 530 aa17.38■□□□□ 0.37
LITAF-208ENST00000571627 USP17L20D6RJB6 530 aa17.38■□□□□ 0.37
LITAF-208ENST00000571627 FOXP2O15409 715 aa17.38■□□□□ 0.37
LITAF-208ENST00000571627 RASA1P20936 1047 aa17.38■□□□□ 0.37
LITAF-208ENST00000571627 ATP2B2Q01814 1243 aa17.38■□□□□ 0.37
LITAF-208ENST00000571627 USP17L24Q0WX57 530 aa17.38■□□□□ 0.37
LITAF-208ENST00000571627 ARHGEF10LQ9HCE6 1279 aa17.38■□□□□ 0.37
LITAF-208ENST00000571627 RBPJLQ9UBG7 517 aa17.38■□□□□ 0.37
LITAF-208ENST00000571627 PRDM1O75626 825 aa17.37■□□□□ 0.37
LITAF-208ENST00000571627 FLT3LGP49771 235 aa17.37■□□□□ 0.37
LITAF-208ENST00000571627 VPS53Q5VIR6 699 aa17.37■□□□□ 0.37
LITAF-208ENST00000571627 CATSPERGQ6ZRH7 1159 aa17.37■□□□□ 0.37
LITAF-208ENST00000571627 NBPF11Q86T75 865 aa17.37■□□□□ 0.37
LITAF-208ENST00000571627 SPICE1Q8N0Z3 855 aa17.37■□□□□ 0.37
LITAF-208ENST00000571627 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.37■□□□□ 0.37
LITAF-208ENST00000571627 NACAP1Q9BZK3 213 aa17.37■□□□□ 0.37
LITAF-208ENST00000571627 NAPBQ9H115 298 aa17.37■□□□□ 0.37
LITAF-208ENST00000571627 MKNK2Q9HBH9 465 aa17.37■□□□□ 0.37
LITAF-208ENST00000571627 A0A0G2JMZ2 1700 aa17.36■□□□□ 0.37
LITAF-208ENST00000571627 CENPBP07199 599 aaPredicted RBP17.36■□□□□ 0.37
LITAF-208ENST00000571627 EEF2P13639 858 aaKnown RBP17.36■□□□□ 0.37
LITAF-208ENST00000571627 PDE4AP27815 886 aa17.36■□□□□ 0.37
LITAF-208ENST00000571627 GRK4P32298 578 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms