RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 HIP1O00291 1037 aa8.33□□□□□ -1.08
SMG6-209ENST00000571442 MPHOSPH10O00566 681 aaKnown RBP8.33□□□□□ -1.08
SMG6-209ENST00000571442 PEX10O60683 326 aa8.33□□□□□ -1.08
SMG6-209ENST00000571442 CYP2C8P10632 490 aa8.33□□□□□ -1.08
SMG6-209ENST00000571442 CETPP11597 493 aa8.33□□□□□ -1.08
SMG6-209ENST00000571442 COL9A3Q14050 684 aaPredicted RBP8.33□□□□□ -1.08
SMG6-209ENST00000571442 ZYXQ15942 572 aaKnown RBP8.33□□□□□ -1.08
SMG6-209ENST00000571442 SH3D19Q5HYK7 790 aa8.33□□□□□ -1.08
SMG6-209ENST00000571442 FAM47AQ5JRC9 791 aa8.33□□□□□ -1.08
SMG6-209ENST00000571442 GADL1Q6ZQY3 521 aa8.33□□□□□ -1.08
SMG6-209ENST00000571442 DDRGK1Q96HY6 314 aa8.33□□□□□ -1.08
SMG6-209ENST00000571442 NACAP1Q9BZK3 213 aa8.33□□□□□ -1.08
SMG6-209ENST00000571442 SAGE1Q9NXZ1 904 aa8.33□□□□□ -1.08
SMG6-209ENST00000571442 ANAPC4Q9UJX5 808 aa8.33□□□□□ -1.08
SMG6-209ENST00000571442 PARP14Q460N5 1801 aa8.33□□□□□ -1.08
SMG6-209ENST00000571442 ZMYM6O95789 1325 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 NEDD4P46934 1319 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 RAD50Q92878 1312 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 PDHXO00330 501 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 NMT2O60551 498 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 FGRP09769 529 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 BACE1P56817 501 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 INHBEP58166 350 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 TMEM179Q6ZVK1 233 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 RASGRP2Q7LDG7 609 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 ANKRD23Q86SG2 305 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 REM2Q8IYK8 340 aaPredicted RBP8.32□□□□□ -1.08
SMG6-209ENST00000571442 ESYT1Q9BSJ8 1104 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 DSCC1Q9BVC3 393 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 CFHR5Q9BXR6 569 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 MCOLN1Q9GZU1 580 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 LSG1Q9H089 658 aaKnown RBP8.32□□□□□ -1.08
SMG6-209ENST00000571442 IL17RBQ9NRM6 502 aa8.32□□□□□ -1.08
SMG6-209ENST00000571442 USP17L10C9JJH3 530 aa8.31□□□□□ -1.08
SMG6-209ENST00000571442 GPR25O00155 361 aa8.31□□□□□ -1.08
SMG6-209ENST00000571442 ECM2O94769 699 aaPredicted RBP8.31□□□□□ -1.08
SMG6-209ENST00000571442 EEF2P13639 858 aaKnown RBP8.31□□□□□ -1.08
SMG6-209ENST00000571442 CTGFP29279 349 aa8.31□□□□□ -1.08
SMG6-209ENST00000571442 ICA1Q05084 483 aa8.31□□□□□ -1.08
SMG6-209ENST00000571442 TAF1CQ15572 869 aaPredicted RBP8.31□□□□□ -1.08
SMG6-209ENST00000571442 STOX1Q6ZVD7 989 aa8.31□□□□□ -1.08
SMG6-209ENST00000571442 AMOTL1Q8IY63 956 aa8.31□□□□□ -1.08
SMG6-209ENST00000571442 ZNF296Q8WUU4 475 aaPredicted RBP8.31□□□□□ -1.08
SMG6-209ENST00000571442 CEP95Q96GE4 821 aa8.31□□□□□ -1.08
SMG6-209ENST00000571442 CCDC17Q96LX7 622 aa8.31□□□□□ -1.08
SMG6-209ENST00000571442 MKNK2Q9HBH9 465 aa8.31□□□□□ -1.08
SMG6-209ENST00000571442 AS3MTQ9HBK9 375 aa8.31□□□□□ -1.08
SMG6-209ENST00000571442 CABP5Q9NP86 173 aa8.31□□□□□ -1.08
SMG6-209ENST00000571442 GINM1Q9NU53 330 aa8.31□□□□□ -1.08
SMG6-209ENST00000571442 CPA4Q9UI42 421 aa8.31□□□□□ -1.08
SMG6-209ENST00000571442 AGTPBP1Q9UPW5 1226 aa8.31□□□□□ -1.08
SMG6-209ENST00000571442 PLIN4Q96Q06 1357 aa8.31□□□□□ -1.08
SMG6-209ENST00000571442 ORC4O43929 436 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 CYP21A2P08686 494 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 VCAM1P19320 739 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 TFAP4Q01664 338 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 RRP12Q5JTH9 1297 aaKnown RBP8.3□□□□□ -1.08
SMG6-209ENST00000571442 AKNAD1Q5T1N1 836 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 C17orf99Q6UX52 265 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 PROCA1Q8NCQ7 364 aaPredicted RBP8.3□□□□□ -1.08
SMG6-209ENST00000571442 NEDD1Q8NHV4 660 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 STAG1Q8WVM7 1258 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 MAP4K1Q92918 833 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 C12orf42Q96LP6 360 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 TBC1D2Q9BYX2 928 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 ARHGAP39Q9C0H5 1083 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 KIAA1683Q9H0B3 1180 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 ASCC2Q9H1I8 757 aaPredicted RBP8.3□□□□□ -1.08
SMG6-209ENST00000571442 TMX2Q9Y320 296 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 RBM8AQ9Y5S9 174 aaKnown RBP8.3□□□□□ -1.08
SMG6-209ENST00000571442 DOCK3Q8IZD9 2030 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 MGAMO43451 1857 aa8.3□□□□□ -1.08
SMG6-209ENST00000571442 COL11A1P12107 1806 aaPredicted RBP8.29□□□□□ -1.08
SMG6-209ENST00000571442 B4E1Z4 1266 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 C19orf81C9J6K1 198 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 RANBP6O60518 1105 aaKnown RBP8.29□□□□□ -1.08
SMG6-209ENST00000571442 TLR2O60603 784 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 CDC45O75419 566 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 ALDH1A1P00352 501 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 BCRP11274 1271 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 NOVP48745 357 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 MFAP1P55081 439 aaKnown RBP8.29□□□□□ -1.08
SMG6-209ENST00000571442 ATP2B2Q01814 1243 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 MLLT1Q03111 559 aaPredicted RBP8.29□□□□□ -1.08
SMG6-209ENST00000571442 PDE4BQ07343 736 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 USP17L2Q6R6M4 530 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 FASTKD5Q7L8L6 764 aaKnown RBP8.29□□□□□ -1.08
SMG6-209ENST00000571442 ZNF444Q8N0Y2 327 aaPredicted RBP8.29□□□□□ -1.08
SMG6-209ENST00000571442 SPICE1Q8N0Z3 855 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 LRRC47Q8N1G4 583 aaKnown RBP8.29□□□□□ -1.08
SMG6-209ENST00000571442 RUFY2Q8WXA3 655 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 CHMP4CQ96CF2 233 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 NUP88Q99567 741 aaPredicted RBP8.29□□□□□ -1.08
SMG6-209ENST00000571442 P2RX7Q99572 595 aaKnown RBP8.29□□□□□ -1.08
SMG6-209ENST00000571442 FEZ1Q99689 392 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 ZKSCAN3Q9BRR0 538 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 VCPKMTQ9H867 229 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 KANSL2Q9H9L4 492 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 ZFYVE28Q9HCC9 887 aa8.29□□□□□ -1.08
SMG6-209ENST00000571442 TXNRD2Q9NNW7 524 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms