RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 DYNLL1P63167 89 aaKnown RBP23.18■■□□□ 1.3
SCARF1-204ENST00000570902 ATP8B2P98198 1209 aa23.18■■□□□ 1.3
SCARF1-204ENST00000570902 TATDN1Q6P1N9 297 aa23.18■■□□□ 1.3
SCARF1-204ENST00000570902 EDC3Q96F86 508 aaKnown RBP23.18■■□□□ 1.3
SCARF1-204ENST00000570902 SERPINB13Q9UIV8 391 aa23.18■■□□□ 1.3
SCARF1-204ENST00000570902 STXBP5LQ9Y2K9 1186 aa23.18■■□□□ 1.3
SCARF1-204ENST00000570902 LRRC26Q2I0M4 334 aa23.17■■□□□ 1.3
SCARF1-204ENST00000570902 MFSD14CQ5VZR4 134 aa23.17■■□□□ 1.3
SCARF1-204ENST00000570902 TMED8Q6PL24 325 aaPredicted RBP23.17■■□□□ 1.3
SCARF1-204ENST00000570902 POTEEQ6S8J3 1075 aa23.17■■□□□ 1.3
SCARF1-204ENST00000570902 TMEM57Q8N5G2 664 aa23.17■■□□□ 1.3
SCARF1-204ENST00000570902 EHD4Q9H223 541 aa23.17■■□□□ 1.3
SCARF1-204ENST00000570902 IDH1O75874 414 aaKnown RBP23.16■■□□□ 1.3
SCARF1-204ENST00000570902 ZYXQ15942 572 aaKnown RBP23.16■■□□□ 1.3
SCARF1-204ENST00000570902 Q7L0L9 218 aa23.16■■□□□ 1.3
SCARF1-204ENST00000570902 KIAA1683Q9H0B3 1180 aa23.16■■□□□ 1.3
SCARF1-204ENST00000570902 DBNLQ9UJU6 430 aaKnown RBP23.16■■□□□ 1.3
SCARF1-204ENST00000570902 SLC15A5A6NIM6 579 aa23.15■■□□□ 1.3
SCARF1-204ENST00000570902 RAB3GAP1Q15042 981 aa23.15■■□□□ 1.3
SCARF1-204ENST00000570902 WDR78Q5VTH9 848 aa23.15■■□□□ 1.3
SCARF1-204ENST00000570902 ZKSCAN2Q63HK3 967 aa23.15■■□□□ 1.3
SCARF1-204ENST00000570902 CATSPERGQ6ZRH7 1159 aa23.15■■□□□ 1.3
SCARF1-204ENST00000570902 TTC6Q86TZ1 520 aa23.15■■□□□ 1.3
SCARF1-204ENST00000570902 MTMR10Q9NXD2 777 aa23.15■■□□□ 1.3
SCARF1-204ENST00000570902 NOP58Q9Y2X3 529 aaKnown RBP23.15■■□□□ 1.3
SCARF1-204ENST00000570902 MYO5AQ9Y4I1 1855 aaKnown RBP23.14■■□□□ 1.29
SCARF1-204ENST00000570902 CCER2I3L3R5 266 aa23.14■■□□□ 1.29
SCARF1-204ENST00000570902 MSCO60682 206 aa23.14■■□□□ 1.29
SCARF1-204ENST00000570902 CNMDO75829 334 aa23.14■■□□□ 1.29
SCARF1-204ENST00000570902 ABCB5Q2M3G0 1257 aa23.14■■□□□ 1.29
SCARF1-204ENST00000570902 CERKLQ49MI3 558 aaPredicted RBP23.14■■□□□ 1.29
SCARF1-204ENST00000570902 LBX2Q6XYB7 198 aa23.14■■□□□ 1.29
SCARF1-204ENST00000570902 MIGA1Q8NAN2 632 aa23.14■■□□□ 1.29
SCARF1-204ENST00000570902 CABP5Q9NP86 173 aa23.14■■□□□ 1.29
SCARF1-204ENST00000570902 IVNS1ABPQ9Y6Y0 642 aa23.14■■□□□ 1.29
SCARF1-204ENST00000570902 MYH1P12882 1939 aa23.14■■□□□ 1.29
SCARF1-204ENST00000570902 VCAM1P19320 739 aa23.13■■□□□ 1.29
SCARF1-204ENST00000570902 PTPREP23469 700 aa23.13■■□□□ 1.29
SCARF1-204ENST00000570902 MDM2Q00987 491 aaPredicted RBP23.13■■□□□ 1.29
SCARF1-204ENST00000570902 MAGEB6Q8N7X4 407 aa23.13■■□□□ 1.29
SCARF1-204ENST00000570902 HOXC6P09630 235 aa23.12■■□□□ 1.29
SCARF1-204ENST00000570902 ATP2B2Q01814 1243 aa23.12■■□□□ 1.29
SCARF1-204ENST00000570902 MAP3K12Q12852 859 aa23.12■■□□□ 1.29
SCARF1-204ENST00000570902 LBHD1Q9BQE6 289 aaPredicted RBP23.12■■□□□ 1.29
SCARF1-204ENST00000570902 SENP6Q9GZR1 1112 aaPredicted RBP23.12■■□□□ 1.29
SCARF1-204ENST00000570902 CCDC8Q9H0W5 538 aaPredicted RBP23.12■■□□□ 1.29
SCARF1-204ENST00000570902 TLR7Q9NYK1 1049 aaKnown RBP23.12■■□□□ 1.29
SCARF1-204ENST00000570902 DDX20Q9UHI6 824 aaKnown RBP23.12■■□□□ 1.29
SCARF1-204ENST00000570902 NDUFB9Q9Y6M9 179 aa23.12■■□□□ 1.29
SCARF1-204ENST00000570902 A0A0C4DFX4 3053 aa23.12■■□□□ 1.29
SCARF1-204ENST00000570902 GRB14Q14449 540 aa23.11■■□□□ 1.29
SCARF1-204ENST00000570902 LPAR1Q92633 364 aa23.11■■□□□ 1.29
SCARF1-204ENST00000570902 FLRT1Q9NZU1 646 aa23.11■■□□□ 1.29
SCARF1-204ENST00000570902 FRMPD3Q5JV73 1810 aa23.1■■□□□ 1.29
SCARF1-204ENST00000570902 CNGA1P29973 690 aa23.1■■□□□ 1.29
SCARF1-204ENST00000570902 ACER1Q8TDN7 264 aa23.1■■□□□ 1.29
SCARF1-204ENST00000570902 EAF2Q96CJ1 260 aaPredicted RBP23.1■■□□□ 1.29
SCARF1-204ENST00000570902 RPAP3Q9H6T3 665 aaPredicted RBP23.1■■□□□ 1.29
SCARF1-204ENST00000570902 C1orf115Q9H7X2 142 aa23.1■■□□□ 1.29
SCARF1-204ENST00000570902 DNM1LO00429 736 aa23.09■■□□□ 1.29
SCARF1-204ENST00000570902 DIEXFQ68CQ4 756 aaKnown RBP23.09■■□□□ 1.29
SCARF1-204ENST00000570902 FTSJ3Q8IY81 847 aaKnown RBP23.09■■□□□ 1.29
SCARF1-204ENST00000570902 BTBD7Q9P203 1132 aa23.09■■□□□ 1.29
SCARF1-204ENST00000570902 PRKAG2Q9UGJ0 569 aa23.09■■□□□ 1.29
SCARF1-204ENST00000570902 SPDYE16A6NNV3 312 aaPredicted RBP23.08■■□□□ 1.29
SCARF1-204ENST00000570902 SHMT1P34896 483 aa23.08■■□□□ 1.29
SCARF1-204ENST00000570902 FAM109BQ6ICB4 259 aaPredicted RBP23.08■■□□□ 1.29
SCARF1-204ENST00000570902 STRNO43815 780 aa23.06■■□□□ 1.28
SCARF1-204ENST00000570902 POLR3DP05423 398 aaPredicted RBP23.06■■□□□ 1.28
SCARF1-204ENST00000570902 CYP2C19P33261 490 aa23.06■■□□□ 1.28
SCARF1-204ENST00000570902 PLCD1P51178 756 aa23.06■■□□□ 1.28
SCARF1-204ENST00000570902 DPP9Q86TI2 863 aa23.06■■□□□ 1.28
SCARF1-204ENST00000570902 ERC1Q8IUD2 1116 aa23.06■■□□□ 1.28
SCARF1-204ENST00000570902 ITPRIPQ8IWB1 547 aa23.06■■□□□ 1.28
SCARF1-204ENST00000570902 NPLOC4Q8TAT6 608 aa23.06■■□□□ 1.28
SCARF1-204ENST00000570902 RIOK1Q9BRS2 568 aaKnown RBP23.06■■□□□ 1.28
SCARF1-204ENST00000570902 ANTXR1Q9H6X2 564 aa23.06■■□□□ 1.28
SCARF1-204ENST00000570902 HOXC10Q9NYD6 342 aa23.06■■□□□ 1.28
SCARF1-204ENST00000570902 GUCY1A2P33402 732 aa23.05■■□□□ 1.28
SCARF1-204ENST00000570902 ATN1P54259 1190 aaPredicted RBP23.05■■□□□ 1.28
SCARF1-204ENST00000570902 COG2Q14746 738 aa23.05■■□□□ 1.28
SCARF1-204ENST00000570902 TTF1Q15361 905 aaPredicted RBP23.05■■□□□ 1.28
SCARF1-204ENST00000570902 OLFML2BQ68BL8 750 aa23.05■■□□□ 1.28
SCARF1-204ENST00000570902 ARRDC4Q8NCT1 418 aa23.05■■□□□ 1.28
SCARF1-204ENST00000570902 MAGEB6P1A0A0J9YX57 407 aa23.04■■□□□ 1.28
SCARF1-204ENST00000570902 POTEB2H3BUK9 544 aa23.04■■□□□ 1.28
SCARF1-204ENST00000570902 IGHA2P01877 340 aa23.04■■□□□ 1.28
SCARF1-204ENST00000570902 CYBAP13498 195 aa23.04■■□□□ 1.28
SCARF1-204ENST00000570902 SEPT2Q15019 361 aa23.04■■□□□ 1.28
SCARF1-204ENST00000570902 CRNKL1Q9BZJ0 848 aaKnown RBP23.04■■□□□ 1.28
SCARF1-204ENST00000570902 ZNF236Q9UL36 1845 aa23.03■■□□□ 1.28
SCARF1-204ENST00000570902 DNAH12Q6ZR08 3092 aa23.03■■□□□ 1.28
SCARF1-204ENST00000570902 ADORA2AP29274 412 aa23.03■■□□□ 1.28
SCARF1-204ENST00000570902 RTP1P59025 263 aa23.03■■□□□ 1.28
SCARF1-204ENST00000570902 GABPAQ06546 454 aa23.03■■□□□ 1.28
SCARF1-204ENST00000570902 AACSQ86V21 672 aa23.03■■□□□ 1.28
SCARF1-204ENST00000570902 MIER1Q8N108 512 aa23.03■■□□□ 1.28
SCARF1-204ENST00000570902 SHCBP1Q8NEM2 672 aa23.03■■□□□ 1.28
SCARF1-204ENST00000570902 TRPV1Q8NER1 839 aa23.03■■□□□ 1.28
SCARF1-204ENST00000570902 MOV10L1Q9BXT6 1211 aaKnown RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms