RNA–Protein interactions for RNA: ENST00000570287.6

TCF4-246, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-246ENST00000570287 RFX7Q2KHR2 1363 aa9.27□□□□□ -0.93
TCF4-246ENST00000570287 PPP1R12AO14974 1030 aaPredicted RBP9.27□□□□□ -0.93
TCF4-246ENST00000570287 POU3F3P20264 500 aaPredicted RBP9.27□□□□□ -0.93
TCF4-246ENST00000570287 CREB3L3Q68CJ9 461 aa9.27□□□□□ -0.93
TCF4-246ENST00000570287 JAKMIP1Q96N16 626 aaKnown RBP9.27□□□□□ -0.93
TCF4-246ENST00000570287 QTRT2Q9H974 415 aaKnown RBP9.27□□□□□ -0.93
TCF4-246ENST00000570287 SH2B1Q9NRF2 756 aaPredicted RBP9.27□□□□□ -0.93
TCF4-246ENST00000570287 PNMA3Q9UL41 463 aa9.27□□□□□ -0.93
TCF4-246ENST00000570287 RBM8AQ9Y5S9 174 aaKnown RBP9.27□□□□□ -0.93
TCF4-246ENST00000570287 MED23Q9ULK4 1368 aa9.27□□□□□ -0.93
TCF4-246ENST00000570287 KCPQ6ZWJ8 1503 aa9.27□□□□□ -0.93
TCF4-246ENST00000570287 RPAP1Q9BWH6 1393 aaPredicted RBP9.26□□□□□ -0.93
TCF4-246ENST00000570287 JCADQ9P266 1359 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 NBPF26B4DH59 902 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 H7C1W4 665 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 PTCD1O75127 700 aaKnown RBP9.26□□□□□ -0.93
TCF4-246ENST00000570287 IL2RBP14784 551 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 PSMA5P28066 241 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 CCDC183Q5T5S1 534 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 NBPF14Q5TI25 921 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 VPS37DQ86XT2 251 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 NBPF15Q8N660 670 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 MKL1Q969V6 931 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 RAI14Q9P0K7 980 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 NOD1Q9Y239 953 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 NUP188Q5SRE5 1749 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 ABCA3Q99758 1704 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 CFAP69A5D8W1 941 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 SSBP05455 408 aaKnown RBP eCLIP9.26□□□□□ -0.93
TCF4-246ENST00000570287 TFCP2Q12800 502 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 ORC1Q13415 861 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 ADCK5Q3MIX3 580 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 RNF20Q5VTR2 975 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 HS2ST1Q7LGA3 356 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 A0A0D9SFI3 127 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 AP5Z1O43299 807 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 SQSTM1Q13501 440 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 DBNLQ9UJU6 430 aaKnown RBP9.26□□□□□ -0.93
TCF4-246ENST00000570287 SMC3Q9UQE7 1217 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 PAXBP1Q9Y5B6 917 aa9.26□□□□□ -0.93
TCF4-246ENST00000570287 SLC27A2O14975 620 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 ATP1A2P50993 1020 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 BORCS6Q96GS4 357 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 PPCSQ9HAB8 311 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 CWC25Q9NXE8 425 aaPredicted RBP9.25□□□□□ -0.93
TCF4-246ENST00000570287 TNS2Q63HR2 1409 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 SHANK3Q9BYB0 1731 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 STRCQ7RTU9 1775 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 SCGB1D2O95969 90 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 ZSCAN22P10073 491 aaPredicted RBP9.25□□□□□ -0.93
TCF4-246ENST00000570287 USP46P62068 366 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 FOXO4P98177 505 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 KIAA0907Q7Z7F0 614 aaPredicted RBP9.25□□□□□ -0.93
TCF4-246ENST00000570287 AMOTL1Q8IY63 956 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 CELF2-AS1Q8N7Q2 184 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 UBR7Q8N806 425 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 SCYL1Q96KG9 808 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 TRIM55Q9BYV6 548 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 ALDH8A1Q9H2A2 487 aaPredicted RBP9.25□□□□□ -0.93
TCF4-246ENST00000570287 HMG20BQ9P0W2 317 aa9.25□□□□□ -0.93
TCF4-246ENST00000570287 STX6O43752 255 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 GADD45BO75293 160 aaPredicted RBP9.24□□□□□ -0.93
TCF4-246ENST00000570287 CPA1P15085 419 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 CYP2C19P33261 490 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 MAP2K1Q02750 393 aaPredicted RBP9.24□□□□□ -0.93
TCF4-246ENST00000570287 LMBR1LQ6UX01 489 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 CCDC191Q8NCU4 936 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 PTPRHQ9HD43 1115 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 GPR108Q9NPR9 543 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 BSDC1Q9NW68 430 aaPredicted RBP9.24□□□□□ -0.93
TCF4-246ENST00000570287 PRKAB1Q9Y478 270 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 FAM13AO94988 1023 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 SYT1P21579 422 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 ANKRD1Q15327 319 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 PPP4R4Q6NUP7 873 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 TTLL7Q6ZT98 887 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 EFCC1Q9HA90 598 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 FEZ2Q9UHY8 353 aaPredicted RBP9.24□□□□□ -0.93
TCF4-246ENST00000570287 PCDHGA11Q9Y5H2 935 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 ATP6V1DQ9Y5K8 247 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 TJP1Q07157 1748 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 SHTN1A0MZ66 631 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 BPNT1O95861 308 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 MYBPC2Q14324 1141 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 ILDR2Q71H61 639 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 ZNF397Q8NF99 534 aaPredicted RBP9.24□□□□□ -0.93
TCF4-246ENST00000570287 FAM129BQ96TA1 746 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 HAUS7Q99871 368 aa9.24□□□□□ -0.93
TCF4-246ENST00000570287 TSPAN6O43657 245 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 TAF5LO75529 589 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 LARGE1O95461 756 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 A1BGP04217 495 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 NPR3P17342 541 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 ATP2B2Q01814 1243 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 USPL1Q5W0Q7 1092 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 CCDC83Q8IWF9 413 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 DBNDD2Q9BQY9 259 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 ARNT2Q9HBZ2 717 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 OPLAHO14841 1288 aa9.23□□□□□ -0.93
TCF4-246ENST00000570287 KLF4O43474 513 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms