RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 MINDY4BA8MYZ0 360 aa13.23□□□□□ -0.29
SHCBP1-207ENST00000569702 MPHOSPH10O00566 681 aaKnown RBP13.23□□□□□ -0.29
SHCBP1-207ENST00000569702 GSPT1P15170 499 aaKnown RBP13.23□□□□□ -0.29
SHCBP1-207ENST00000569702 LACTBP83111 547 aaPredicted RBP13.23□□□□□ -0.29
SHCBP1-207ENST00000569702 PABPC4Q13310 644 aaKnown RBP eCLIP13.23□□□□□ -0.29
SHCBP1-207ENST00000569702 VPS53Q5VIR6 699 aa13.23□□□□□ -0.29
SHCBP1-207ENST00000569702 USP17L2Q6R6M4 530 aa13.23□□□□□ -0.29
SHCBP1-207ENST00000569702 SIAH1Q8IUQ4 282 aa13.23□□□□□ -0.29
SHCBP1-207ENST00000569702 NAPBQ9H115 298 aa13.23□□□□□ -0.29
SHCBP1-207ENST00000569702 PNMA3Q9UL41 463 aa13.23□□□□□ -0.29
SHCBP1-207ENST00000569702 CENPFP49454 3210 aa13.22□□□□□ -0.29
SHCBP1-207ENST00000569702 A0A1W2PRG0 241 aa13.22□□□□□ -0.29
SHCBP1-207ENST00000569702 USP14P54578 494 aa13.22□□□□□ -0.29
SHCBP1-207ENST00000569702 ALX1Q15699 326 aa13.22□□□□□ -0.29
SHCBP1-207ENST00000569702 TTC22Q5TAA0 569 aa13.22□□□□□ -0.29
SHCBP1-207ENST00000569702 FBXO46Q6PJ61 603 aaPredicted RBP13.22□□□□□ -0.29
SHCBP1-207ENST00000569702 ZNF589Q86UQ0 364 aaPredicted RBP13.22□□□□□ -0.29
SHCBP1-207ENST00000569702 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.22□□□□□ -0.29
SHCBP1-207ENST00000569702 ASCC2Q9H1I8 757 aaPredicted RBP13.22□□□□□ -0.29
SHCBP1-207ENST00000569702 EFCC1Q9HA90 598 aa13.22□□□□□ -0.29
SHCBP1-207ENST00000569702 TRIM17Q9Y577 477 aa13.22□□□□□ -0.29
SHCBP1-207ENST00000569702 MYH8P13535 1937 aa13.21□□□□□ -0.29
SHCBP1-207ENST00000569702 HIP1O00291 1037 aa13.21□□□□□ -0.29
SHCBP1-207ENST00000569702 HSPD1P10809 573 aaKnown RBP13.21□□□□□ -0.29
SHCBP1-207ENST00000569702 RASA1P20936 1047 aa13.21□□□□□ -0.29
SHCBP1-207ENST00000569702 OSBPP22059 807 aa13.21□□□□□ -0.29
SHCBP1-207ENST00000569702 CTGFP29279 349 aa13.21□□□□□ -0.29
SHCBP1-207ENST00000569702 PPARAQ07869 468 aa13.21□□□□□ -0.29
SHCBP1-207ENST00000569702 ARHGEF6Q15052 776 aa13.21□□□□□ -0.29
SHCBP1-207ENST00000569702 CENPQQ7L2Z9 268 aaPredicted RBP13.21□□□□□ -0.29
SHCBP1-207ENST00000569702 SMCR8Q8TEV9 937 aaPredicted RBP13.21□□□□□ -0.29
SHCBP1-207ENST00000569702 FEZ1Q99689 392 aa13.21□□□□□ -0.29
SHCBP1-207ENST00000569702 ARHGAP39Q9C0H5 1083 aa13.21□□□□□ -0.29
SHCBP1-207ENST00000569702 KANSL2Q9H9L4 492 aa13.21□□□□□ -0.29
SHCBP1-207ENST00000569702 MKNK2Q9HBH9 465 aa13.21□□□□□ -0.29
SHCBP1-207ENST00000569702 CCDC171Q6TFL3 1326 aa13.2□□□□□ -0.3
SHCBP1-207ENST00000569702 GNRH1P01148 92 aa13.2□□□□□ -0.3
SHCBP1-207ENST00000569702 FGAP02671 866 aa13.2□□□□□ -0.3
SHCBP1-207ENST00000569702 GCLCP48506 637 aaPredicted RBP13.2□□□□□ -0.3
SHCBP1-207ENST00000569702 ZYXQ15942 572 aaKnown RBP13.2□□□□□ -0.3
SHCBP1-207ENST00000569702 CLEC10AQ8IUN9 316 aa13.2□□□□□ -0.3
SHCBP1-207ENST00000569702 STK11IPQ8N1F8 1099 aa13.2□□□□□ -0.3
SHCBP1-207ENST00000569702 P2RX7Q99572 595 aaKnown RBP13.2□□□□□ -0.3
SHCBP1-207ENST00000569702 ZNF287Q9HBT7 754 aa13.2□□□□□ -0.3
SHCBP1-207ENST00000569702 ANAPC4Q9UJX5 808 aa13.2□□□□□ -0.3
SHCBP1-207ENST00000569702 HPS5Q9UPZ3 1129 aa13.2□□□□□ -0.3
SHCBP1-207ENST00000569702 PTPN22Q9Y2R2 807 aa13.2□□□□□ -0.3
SHCBP1-207ENST00000569702 TMX2Q9Y320 296 aa13.2□□□□□ -0.3
SHCBP1-207ENST00000569702 GREB1LQ9C091 1923 aaPredicted RBP13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 ZMYM6O95789 1325 aa13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 IGKV6D-41A0A0C4DH26 115 aa13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 VCAM1P19320 739 aa13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 PSMC4P43686 418 aa13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 MFAP1P55081 439 aaKnown RBP13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 IRX3P78415 501 aaPredicted RBP13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 ICA1Q05084 483 aa13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 PDE4BQ07343 736 aa13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 KIF22Q14807 665 aa13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 FAM110CQ1W6H9 321 aa13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 CWC27Q6UX04 472 aaKnown RBP13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 ANKRD13CQ8N6S4 541 aa13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 TRIM47Q96LD4 638 aa13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 ARHGEF10LQ9HCE6 1279 aa13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 DIAPH3Q9NSV4 1193 aa13.19□□□□□ -0.3
SHCBP1-207ENST00000569702 USP17L15C9J2P7 530 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 USP17L13C9JLJ4 530 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 USP17L11C9JVI0 530 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 USP17L18D6R9N7 530 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 USP17L22D6RA61 530 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 USP17L17D6RBQ6 530 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 USP17L19D6RCP7 530 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 USP17L20D6RJB6 530 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 PRDM1O75626 825 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 SLC3A2P08195 630 aaKnown RBP13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 FGRP09769 529 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 EEF2P13639 858 aaKnown RBP13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 HERVK_113P62684 666 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 USP17L24Q0WX57 530 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 KIAA1755Q5JYT7 1200 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 POTEEQ6S8J3 1075 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 CATSPERGQ6ZRH7 1159 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 ZNF444Q8N0Y2 327 aaPredicted RBP13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 SH2D4AQ9H788 454 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 MORF4L1Q9UBU8 362 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 ZSWIM8A7E2V4 1837 aa13.18□□□□□ -0.3
SHCBP1-207ENST00000569702 PRMT2P55345 433 aa13.17□□□□□ -0.3
SHCBP1-207ENST00000569702 CTDSPL2Q05D32 466 aa13.17□□□□□ -0.3
SHCBP1-207ENST00000569702 LBX2Q6XYB7 198 aa13.17□□□□□ -0.3
SHCBP1-207ENST00000569702 NEDD1Q8NHV4 660 aa13.17□□□□□ -0.3
SHCBP1-207ENST00000569702 GTF3C2Q8WUA4 911 aaPredicted RBP13.17□□□□□ -0.3
SHCBP1-207ENST00000569702 LPAR1Q92633 364 aa13.17□□□□□ -0.3
SHCBP1-207ENST00000569702 RPAP3Q9H6T3 665 aaPredicted RBP13.17□□□□□ -0.3
SHCBP1-207ENST00000569702 VCPKMTQ9H867 229 aa13.17□□□□□ -0.3
SHCBP1-207ENST00000569702 NYAP2Q9P242 653 aa13.17□□□□□ -0.3
SHCBP1-207ENST00000569702 RBPJLQ9UBG7 517 aa13.17□□□□□ -0.3
SHCBP1-207ENST00000569702 SRRDQ9UH36 339 aa13.17□□□□□ -0.3
SHCBP1-207ENST00000569702 TACC3Q9Y6A5 838 aa13.17□□□□□ -0.3
SHCBP1-207ENST00000569702 PLIN4Q96Q06 1357 aa13.17□□□□□ -0.3
SHCBP1-207ENST00000569702 CCDC85CA6NKD9 419 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms