RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ACRP10323 421 aa8.47□□□□□ -1.05
HERPUD1-217ENST00000569429 ANO1Q5XXA6 986 aa8.47□□□□□ -1.05
HERPUD1-217ENST00000569429 GTF3C2Q8WUA4 911 aaPredicted RBP8.47□□□□□ -1.05
HERPUD1-217ENST00000569429 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.47□□□□□ -1.05
HERPUD1-217ENST00000569429 ZNF236Q9UL36 1845 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 EPOPA6NHQ4 379 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 SLC15A5A6NIM6 579 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 DDX58O95786 925 aaKnown RBP8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 MYOGP15173 224 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 IL9P15248 144 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 PTPREP23469 700 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 RABGGTBP53611 331 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 KCTD2Q14681 263 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 UBE3BQ7Z3V4 1068 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 FBXO33Q7Z6M2 555 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 ZFPM1Q8IX07 1006 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 NPLOC4Q8TAT6 608 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 CNTNAP3BQ96NU0 1288 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 CNTNAP3Q9BZ76 1288 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 ALG13Q9NP73 1137 aaKnown RBP8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 IL23AQ9NPF7 189 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 FAM86C1Q9NVL1 165 aa8.46□□□□□ -1.06
HERPUD1-217ENST00000569429 A0A1W2PQ45 241 aaPredicted RBP8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 A0A1W2PQY0 241 aa8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 GRXCR2A6NFK2 248 aa8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 NEURL1BA8MQ27 555 aa8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 ENTPD3O75355 529 aa8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 FGBP02675 491 aa8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 RIPK4P57078 832 aa8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 CHAF1AQ13111 956 aaPredicted RBP8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 CNGB1Q14028 1251 aaPredicted RBP8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 GRB14Q14449 540 aa8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 FAM47AQ5JRC9 791 aa8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 DUSP27Q5VZP5 1158 aa8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 OLFML2BQ68BL8 750 aa8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 PNNQ9H307 717 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 UBE2ZQ9H832 354 aaPredicted RBP8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 CWC22Q9HCG8 908 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 LMCD1Q9NZU5 365 aa8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 TIMELESSQ9UNS1 1208 aa8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 MAP3K2Q9Y2U5 619 aa8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 COL4A4P53420 1690 aaPredicted RBP8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 MAPK8IP3Q9UPT6 1336 aa8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 FLNBO75369 2602 aaKnown RBP8.45□□□□□ -1.06
HERPUD1-217ENST00000569429 C19orf67A6NJJ6 358 aa8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 PLIN1O60240 522 aa8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 TBC1D12O60347 775 aa8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 PPP2R1AP30153 589 aa8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 CASP7P55210 303 aa8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 LMOD3Q0VAK6 560 aa8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 IFIT5Q13325 482 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 COL9A2Q14055 689 aaPredicted RBP8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 GCKRQ14397 625 aa8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 PUS10Q3MIT2 529 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 PTCRAQ6ISU1 281 aaPredicted RBP8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 SH3BP5LQ7L8J4 393 aa8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 ASCL5Q7RTU5 278 aa8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 RNF180Q86T96 592 aa8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 IDI2Q9BXS1 227 aa8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 UPF3BQ9BZI7 483 aaKnown RBP8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 OSBPL5Q9H0X9 879 aaPredicted RBP8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 IQSEC3Q9UPP2 1182 aaPredicted RBP8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 TRPC6Q9Y210 931 aa8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 MROH7Q68CQ1 1323 aa8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 CDK5RAP2Q96SN8 1893 aa8.44□□□□□ -1.06
HERPUD1-217ENST00000569429 COL4A6Q14031 1691 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 USP17L5A8MUK1 530 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 LPXNO60711 386 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 FRAT2O75474 233 aaPredicted RBP8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 CA3P07451 260 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 SLURP2P0DP57 97 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 CCNA1P78396 465 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 NEXNQ0ZGT2 675 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 GRB10Q13322 594 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 CWF19L2Q2TBE0 894 aaKnown RBP8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 TMEM67Q5HYA8 995 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 KSR2Q6VAB6 950 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 LDHAL6AQ6ZMR3 332 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 OTOP2Q7RTS6 562 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 VPS37DQ86XT2 251 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 ATOH1Q92858 354 aaPredicted RBP8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 TSEN34Q9BSV6 310 aaKnown RBP8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 PAGR1Q9BTK6 254 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 USP40Q9NVE5 1235 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 RNF216Q9NWF9 866 aaPredicted RBP8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 PRKAG3Q9UGI9 489 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 RABGAP1Q9Y3P9 1069 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 SLC4A7Q9Y6M7 1214 aa8.43□□□□□ -1.06
HERPUD1-217ENST00000569429 CACNA1FO60840 1977 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 TET1Q8NFU7 2136 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 PRR23AA6NEV1 266 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 DDTLA6NHG4 134 aaPredicted RBP8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 APBB1O00213 710 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 KCNA5P22460 613 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 RGS3P49796 1198 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 CDK7P50613 346 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 BACE1P56817 501 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 ZP2Q05996 745 aa8.42□□□□□ -1.06
HERPUD1-217ENST00000569429 HERC4Q5GLZ8 1057 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms