RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 ARHGAP39Q9C0H5 1083 aa10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 EPB41L4AQ9HCS5 686 aaPredicted RBP10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 INCENPQ9NQS7 918 aa10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 TMOD4Q9NZQ9 345 aa10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 DDX60LQ5H9U9 1706 aaKnown RBP10.8□□□□□ -0.68
GTF3C1-210ENST00000569394 PATL2C9JE40 543 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-210ENST00000569394 NEFLP07196 543 aa10.79□□□□□ -0.68
GTF3C1-210ENST00000569394 CTDSPL2Q05D32 466 aa10.79□□□□□ -0.68
GTF3C1-210ENST00000569394 TATDN1Q6P1N9 297 aa10.79□□□□□ -0.68
GTF3C1-210ENST00000569394 TMED8Q6PL24 325 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-210ENST00000569394 CTU1Q7Z7A3 348 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-210ENST00000569394 ANKRD23Q86SG2 305 aa10.79□□□□□ -0.68
GTF3C1-210ENST00000569394 METTL16Q86W50 562 aaKnown RBP10.79□□□□□ -0.68
GTF3C1-210ENST00000569394 IFNL3Q8IZI9 196 aa10.79□□□□□ -0.68
GTF3C1-210ENST00000569394 SMCR8Q8TEV9 937 aaPredicted RBP10.79□□□□□ -0.68
GTF3C1-210ENST00000569394 NAPBQ9H115 298 aa10.79□□□□□ -0.68
GTF3C1-210ENST00000569394 EHD4Q9H223 541 aa10.79□□□□□ -0.68
GTF3C1-210ENST00000569394 MKNK2Q9HBH9 465 aa10.79□□□□□ -0.68
GTF3C1-210ENST00000569394 TAOK2Q9UL54 1235 aa10.79□□□□□ -0.68
GTF3C1-210ENST00000569394 PTPRFP10586 1907 aa10.79□□□□□ -0.68
GTF3C1-210ENST00000569394 LAMB1P07942 1786 aa10.78□□□□□ -0.68
GTF3C1-210ENST00000569394 USP17L10C9JJH3 530 aa10.78□□□□□ -0.68
GTF3C1-210ENST00000569394 SDSP20132 328 aa10.78□□□□□ -0.68
GTF3C1-210ENST00000569394 GUCY1A2P33402 732 aa10.78□□□□□ -0.68
GTF3C1-210ENST00000569394 MNX1P50219 401 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-210ENST00000569394 BACE1P56817 501 aa10.78□□□□□ -0.68
GTF3C1-210ENST00000569394 GABPAQ06546 454 aa10.78□□□□□ -0.68
GTF3C1-210ENST00000569394 ZNF589Q86UQ0 364 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-210ENST00000569394 TOMM22Q9NS69 142 aa10.78□□□□□ -0.68
GTF3C1-210ENST00000569394 DIAPH3Q9NSV4 1193 aa10.78□□□□□ -0.68
GTF3C1-210ENST00000569394 ARPP21Q9UBL0 812 aaPredicted RBP10.78□□□□□ -0.68
GTF3C1-210ENST00000569394 TLR2O60603 784 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 GSPT1P15170 499 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 OSBPP22059 807 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 HAND2P61296 217 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 GSE1Q14687 1217 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 MCMDC2Q4G0Z9 681 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 FAM47AQ5JRC9 791 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 RRP12Q5JTH9 1297 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 TTC22Q5TAA0 569 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 C16orf86Q6ZW13 317 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 SPICE1Q8N0Z3 855 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 ANKRD13CQ8N6S4 541 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 ERO1AQ96HE7 468 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 CCDC136Q96JN2 1154 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 PARK7Q99497 189 aaKnown RBP10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 NACAP1Q9BZK3 213 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 EFCC1Q9HA90 598 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 EMILIN3Q9NT22 766 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 SWAP70Q9UH65 585 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 AGTPBP1Q9UPW5 1226 aa10.77□□□□□ -0.69
GTF3C1-210ENST00000569394 A0A1W2PRG0 241 aa10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 FMNL1O95466 1100 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 GNAT2P19087 354 aa10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 IRX3P78415 501 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 ICA1Q05084 483 aa10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 PPARAQ07869 468 aa10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 KIF22Q14807 665 aa10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 USP17L2Q6R6M4 530 aa10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 OTOP1Q7RTM1 612 aa10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 ZNF444Q8N0Y2 327 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 SPDYE1Q8NFV5 336 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 P2RX7Q99572 595 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 PAGR1Q9BTK6 254 aa10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 WDR18Q9BV38 432 aa10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 ASCC2Q9H1I8 757 aaPredicted RBP10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 OSBPL3Q9H4L5 887 aa10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 HELLSQ9NRZ9 838 aa10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 ISY1Q9ULR0 285 aaKnown RBP10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 MTMR7Q9Y216 660 aa10.76□□□□□ -0.69
GTF3C1-210ENST00000569394 FOXP2O15409 715 aa10.75□□□□□ -0.69
GTF3C1-210ENST00000569394 CENPBP07199 599 aaPredicted RBP10.75□□□□□ -0.69
GTF3C1-210ENST00000569394 EEF2P13639 858 aaKnown RBP10.75□□□□□ -0.69
GTF3C1-210ENST00000569394 RASA1P20936 1047 aa10.75□□□□□ -0.69
GTF3C1-210ENST00000569394 CTGFP29279 349 aa10.75□□□□□ -0.69
GTF3C1-210ENST00000569394 PSMC4P43686 418 aa10.75□□□□□ -0.69
GTF3C1-210ENST00000569394 KIAA1755Q5JYT7 1200 aa10.75□□□□□ -0.69
GTF3C1-210ENST00000569394 C17orf99Q6UX52 265 aa10.75□□□□□ -0.69
GTF3C1-210ENST00000569394 TMEM179Q6ZVK1 233 aa10.75□□□□□ -0.69
GTF3C1-210ENST00000569394 CFHR5Q9BXR6 569 aa10.75□□□□□ -0.69
GTF3C1-210ENST00000569394 CCDC171Q6TFL3 1326 aa10.75□□□□□ -0.69
GTF3C1-210ENST00000569394 C19orf81C9J6K1 198 aa10.74□□□□□ -0.69
GTF3C1-210ENST00000569394 RANBP6O60518 1105 aaKnown RBP10.74□□□□□ -0.69
GTF3C1-210ENST00000569394 SOX10P56693 466 aa10.74□□□□□ -0.69
GTF3C1-210ENST00000569394 LACTBP83111 547 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-210ENST00000569394 SBK1Q52WX2 424 aa10.74□□□□□ -0.69
GTF3C1-210ENST00000569394 PROCA1Q8NCQ7 364 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-210ENST00000569394 TBC1D2Q9BYX2 928 aa10.74□□□□□ -0.69
GTF3C1-210ENST00000569394 TANGO6Q9C0B7 1094 aa10.74□□□□□ -0.69
GTF3C1-210ENST00000569394 IL25Q9H293 177 aa10.74□□□□□ -0.69
GTF3C1-210ENST00000569394 RPAP3Q9H6T3 665 aaPredicted RBP10.74□□□□□ -0.69
GTF3C1-210ENST00000569394 PNMA3Q9UL41 463 aa10.74□□□□□ -0.69
GTF3C1-210ENST00000569394 HPS5Q9UPZ3 1129 aa10.74□□□□□ -0.69
GTF3C1-210ENST00000569394 TACC3Q9Y6A5 838 aa10.74□□□□□ -0.69
GTF3C1-210ENST00000569394 LOC285556D6RIA3 1793 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 NMT2O60551 498 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 FGAP02671 866 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 SLC3A2P08195 630 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 TSPY3P0CV98 308 aa10.73□□□□□ -0.69
GTF3C1-210ENST00000569394 TSPY8P0CW00 308 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms