RNA–Protein interactions for RNA: ENST00000569338.5

BBS4-217, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 5

Gene BBS4, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-217ENST00000569338 TGFB1P01137 390 aa6.9□□□□□ -1.3
BBS4-217ENST00000569338 CPSF6Q16630 551 aaKnown RBP eCLIP6.9□□□□□ -1.3
BBS4-217ENST00000569338 LETMD1Q6P1Q0 360 aa6.9□□□□□ -1.3
BBS4-217ENST00000569338 CCDC81Q6ZN84 652 aa6.9□□□□□ -1.3
BBS4-217ENST00000569338 SLFN12Q8IYM2 578 aa6.9□□□□□ -1.3
BBS4-217ENST00000569338 PHACTR4Q8IZ21 702 aa6.9□□□□□ -1.3
BBS4-217ENST00000569338 LRRC4CQ9HCJ2 640 aa6.9□□□□□ -1.3
BBS4-217ENST00000569338 PIM2Q9P1W9 311 aa6.9□□□□□ -1.3
BBS4-217ENST00000569338 TPX2Q9ULW0 747 aaKnown RBP6.9□□□□□ -1.3
BBS4-217ENST00000569338 PRR19A6NJB7 356 aa6.89□□□□□ -1.31
BBS4-217ENST00000569338 EOMESO95936 686 aa6.89□□□□□ -1.31
BBS4-217ENST00000569338 RAG1P15918 1043 aa6.89□□□□□ -1.31
BBS4-217ENST00000569338 ATF4P18848 351 aaPredicted RBP6.89□□□□□ -1.31
BBS4-217ENST00000569338 GTF2F1P35269 517 aaKnown RBP eCLIP6.89□□□□□ -1.31
BBS4-217ENST00000569338 ARSHQ5FYA8 562 aa6.89□□□□□ -1.31
BBS4-217ENST00000569338 OVOS1Q6IE37 1185 aa6.89□□□□□ -1.31
BBS4-217ENST00000569338 CDH24Q86UP0 819 aa6.89□□□□□ -1.31
BBS4-217ENST00000569338 SLC43A3Q8NBI5 491 aa6.89□□□□□ -1.31
BBS4-217ENST00000569338 RIN3Q8TB24 985 aa6.89□□□□□ -1.31
BBS4-217ENST00000569338 CYB5D2Q8WUJ1 264 aa6.89□□□□□ -1.31
BBS4-217ENST00000569338 CPLX3Q8WVH0 158 aa6.89□□□□□ -1.31
BBS4-217ENST00000569338 TMEM40Q8WWA1 233 aa6.89□□□□□ -1.31
BBS4-217ENST00000569338 CRBNQ96SW2 442 aa6.89□□□□□ -1.31
BBS4-217ENST00000569338 ANTXR1Q9H6X2 564 aa6.89□□□□□ -1.31
BBS4-217ENST00000569338 GTF2IRD1Q9UHL9 959 aa6.89□□□□□ -1.31
BBS4-217ENST00000569338 TOP2AP11388 1531 aaKnown RBP6.89□□□□□ -1.31
BBS4-217ENST00000569338 WIZO95785 1651 aa6.89□□□□□ -1.31
BBS4-217ENST00000569338 EEA1Q15075 1411 aa6.88□□□□□ -1.31
BBS4-217ENST00000569338 MEIS3P2A8K0S8 358 aa6.88□□□□□ -1.31
BBS4-217ENST00000569338 CYP26A1O43174 497 aa6.88□□□□□ -1.31
BBS4-217ENST00000569338 ATP2B1P20020 1258 aa6.88□□□□□ -1.31
BBS4-217ENST00000569338 DNAJA1P31689 397 aaKnown RBP6.88□□□□□ -1.31
BBS4-217ENST00000569338 ARID5AQ03989 594 aa6.88□□□□□ -1.31
BBS4-217ENST00000569338 ZNF746Q6NUN9 644 aaPredicted RBP6.88□□□□□ -1.31
BBS4-217ENST00000569338 ARHGAP27Q6ZUM4 889 aa6.88□□□□□ -1.31
BBS4-217ENST00000569338 ATG4CQ96DT6 458 aa6.88□□□□□ -1.31
BBS4-217ENST00000569338 CCDC74BQ96LY2 380 aa6.88□□□□□ -1.31
BBS4-217ENST00000569338 HIRIP3Q9BW71 556 aaPredicted RBP6.88□□□□□ -1.31
BBS4-217ENST00000569338 SRRTQ9BXP5 876 aaKnown RBP6.88□□□□□ -1.31
BBS4-217ENST00000569338 PRDM5Q9NQX1 630 aaPredicted RBP6.88□□□□□ -1.31
BBS4-217ENST00000569338 RNF112Q9ULX5 631 aa6.88□□□□□ -1.31
BBS4-217ENST00000569338 CYP7A1P22680 504 aa6.87□□□□□ -1.31
BBS4-217ENST00000569338 GBP1P32455 592 aa6.87□□□□□ -1.31
BBS4-217ENST00000569338 GRIK1P39086 918 aa6.87□□□□□ -1.31
BBS4-217ENST00000569338 EIF6P56537 245 aaKnown RBP6.87□□□□□ -1.31
BBS4-217ENST00000569338 CHMP4BP1P59074 171 aa6.87□□□□□ -1.31
BBS4-217ENST00000569338 CCDC144BQ3MJ40 725 aa6.87□□□□□ -1.31
BBS4-217ENST00000569338 CDCP2Q5VXM1 449 aa6.87□□□□□ -1.31
BBS4-217ENST00000569338 NLRC3Q7RTR2 1065 aa6.87□□□□□ -1.31
BBS4-217ENST00000569338 BAHD1Q8TBE0 780 aaPredicted RBP6.87□□□□□ -1.31
BBS4-217ENST00000569338 KIF2CQ99661 725 aa6.87□□□□□ -1.31
BBS4-217ENST00000569338 PIF1Q9H611 641 aa6.87□□□□□ -1.31
BBS4-217ENST00000569338 CNNM2Q9H8M5 875 aa6.87□□□□□ -1.31
BBS4-217ENST00000569338 CEP131Q9UPN4 1083 aa6.87□□□□□ -1.31
BBS4-217ENST00000569338 WRNQ14191 1432 aaPredicted RBP eCLIP6.86□□□□□ -1.31
BBS4-217ENST00000569338 SSBP05455 408 aaKnown RBP eCLIP6.86□□□□□ -1.31
BBS4-217ENST00000569338 FOSL1P15407 271 aa6.86□□□□□ -1.31
BBS4-217ENST00000569338 NME1P15531 152 aaKnown RBP6.86□□□□□ -1.31
BBS4-217ENST00000569338 ETV3P41162 512 aa6.86□□□□□ -1.31
BBS4-217ENST00000569338 RBBP8NLQ8NC74 664 aaPredicted RBP6.86□□□□□ -1.31
BBS4-217ENST00000569338 PMFBP1Q8TBY8 1022 aa6.86□□□□□ -1.31
BBS4-217ENST00000569338 HEXIM2Q96MH2 286 aaKnown RBP6.86□□□□□ -1.31
BBS4-217ENST00000569338 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.86□□□□□ -1.315e-7■□□□□ 10.6
BBS4-217ENST00000569338 STRIP2Q9ULQ0 834 aa6.86□□□□□ -1.31
BBS4-217ENST00000569338 CECR2Q9BXF3 1484 aa6.85□□□□□ -1.31
BBS4-217ENST00000569338 IGF2BP3O00425 579 aaKnown RBP eCLIP6.85□□□□□ -1.31
BBS4-217ENST00000569338 RGS13O14921 159 aa6.85□□□□□ -1.31
BBS4-217ENST00000569338 COBLO75128 1261 aa6.85□□□□□ -1.31
BBS4-217ENST00000569338 NCLP19338 710 aaKnown RBP6.85□□□□□ -1.31
BBS4-217ENST00000569338 POLR2BP30876 1174 aaKnown RBP6.85□□□□□ -1.31
BBS4-217ENST00000569338 SFRP5Q5T4F7 317 aa6.85□□□□□ -1.31
BBS4-217ENST00000569338 INTS5Q6P9B9 1019 aaKnown RBP6.85□□□□□ -1.31
BBS4-217ENST00000569338 FAM214BQ7L5A3 538 aa6.85□□□□□ -1.31
BBS4-217ENST00000569338 NOP9Q86U38 636 aaKnown RBP6.85□□□□□ -1.31
BBS4-217ENST00000569338 LSRQ86X29 649 aaPredicted RBP6.85□□□□□ -1.31
BBS4-217ENST00000569338 ANKRD13AQ8IZ07 590 aa6.85□□□□□ -1.31
BBS4-217ENST00000569338 FAM181AQ8N9Y4 354 aa6.85□□□□□ -1.31
BBS4-217ENST00000569338 DNAJB8Q8NHS0 232 aa6.85□□□□□ -1.31
BBS4-217ENST00000569338 PPP1R13LQ8WUF5 828 aa6.85□□□□□ -1.31
BBS4-217ENST00000569338 TM9SF2Q99805 663 aa6.85□□□□□ -1.31
BBS4-217ENST00000569338 MAPK8IP1Q9UQF2 711 aa6.85□□□□□ -1.31
BBS4-217ENST00000569338 SMARCA4P51532 1647 aa6.84□□□□□ -1.31
BBS4-217ENST00000569338 CNTNAP4Q9C0A0 1308 aa6.84□□□□□ -1.31
BBS4-217ENST00000569338 GNAT3A8MTJ3 354 aa6.84□□□□□ -1.31
BBS4-217ENST00000569338 TNFRSF10CO14798 259 aa6.84□□□□□ -1.31
BBS4-217ENST00000569338 HOXA10P31260 410 aaPredicted RBP6.84□□□□□ -1.31
BBS4-217ENST00000569338 GIPRP48546 466 aa6.84□□□□□ -1.31
BBS4-217ENST00000569338 ZMYM1Q5SVZ6 1142 aa6.84□□□□□ -1.31
BBS4-217ENST00000569338 RUFY4Q6ZNE9 571 aa6.84□□□□□ -1.31
BBS4-217ENST00000569338 ANAPC16Q96DE5 110 aa6.84□□□□□ -1.31
BBS4-217ENST00000569338 GMLQ99445 158 aa6.84□□□□□ -1.31
BBS4-217ENST00000569338 UBOX5O94941 541 aa6.83□□□□□ -1.32
BBS4-217ENST00000569338 CBX7O95931 251 aa6.83□□□□□ -1.32
BBS4-217ENST00000569338 ITIH2P19823 946 aa6.83□□□□□ -1.32
BBS4-217ENST00000569338 SSTR4P31391 388 aa6.83□□□□□ -1.32
BBS4-217ENST00000569338 CCNFP41002 786 aa6.83□□□□□ -1.32
BBS4-217ENST00000569338 OXCT1P55809 520 aa6.83□□□□□ -1.32
BBS4-217ENST00000569338 INTS3Q68E01 1043 aaKnown RBP6.83□□□□□ -1.32
BBS4-217ENST00000569338 OR6P1Q8NGX9 317 aa6.83□□□□□ -1.32
BBS4-217ENST00000569338 SHDQ96IW2 340 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms