RNA–Protein interactions for RNA: ENST00000569288.1

LINC00555-201, long intergenic non-protein coding RNA 555, humanhuman

BASIC

Gene LINC00555, Length 442 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00555-201ENST00000569288 XBP1P17861 261 aa11.06□□□□□ -0.64
LINC00555-201ENST00000569288 HIRAP54198 1017 aaPredicted RBP11.06□□□□□ -0.64
LINC00555-201ENST00000569288 FSTL1Q12841 308 aa11.06□□□□□ -0.64
LINC00555-201ENST00000569288 TNFAIP1Q13829 316 aa11.06□□□□□ -0.64
LINC00555-201ENST00000569288 KIF4BQ2VIQ3 1234 aa11.06□□□□□ -0.64
LINC00555-201ENST00000569288 SPDYE2Q495Y8 402 aa11.06□□□□□ -0.64
LINC00555-201ENST00000569288 RRP12Q5JTH9 1297 aaKnown RBP11.06□□□□□ -0.64
LINC00555-201ENST00000569288 CHST3Q7LGC8 479 aa11.06□□□□□ -0.64
LINC00555-201ENST00000569288 CRACR2BQ8N4Y2 399 aaPredicted RBP11.06□□□□□ -0.64
LINC00555-201ENST00000569288 HOOK2Q96ED9 719 aa11.06□□□□□ -0.64
LINC00555-201ENST00000569288 PRMT6Q96LA8 375 aaPredicted RBP11.06□□□□□ -0.64
LINC00555-201ENST00000569288 SCAND2PQ9GZW5 306 aaPredicted RBP11.06□□□□□ -0.64
LINC00555-201ENST00000569288 ORC3Q9UBD5 711 aaPredicted RBP11.06□□□□□ -0.64
LINC00555-201ENST00000569288 CFAP45Q9UL16 551 aa11.06□□□□□ -0.64
LINC00555-201ENST00000569288 SHTN1A0MZ66 631 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 GOLGA8AA7E2F4 631 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 WNT10BO00744 389 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 DEXIO95424 95 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 FDPSP14324 419 aaKnown RBP11.05□□□□□ -0.64
LINC00555-201ENST00000569288 TNNI2P48788 182 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 SSRP1Q08945 709 aaKnown RBP11.05□□□□□ -0.64
LINC00555-201ENST00000569288 CHADLQ6NUI6 762 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 NOL8Q76FK4 1167 aaKnown RBP11.05□□□□□ -0.64
LINC00555-201ENST00000569288 SAMD7Q7Z3H4 446 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 BRAPQ7Z569 592 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 SMC1BQ8NDV3 1235 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 CTCFLQ8NI51 663 aaPredicted RBP11.05□□□□□ -0.64
LINC00555-201ENST00000569288 TRPM4Q8TD43 1214 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 KAT14Q9H8E8 782 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 KANSL2Q9H9L4 492 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 INCENPQ9NQS7 918 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 IL17RBQ9NRM6 502 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 FOXD4L1Q9NU39 408 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 FAM198AQ9UFP1 575 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 MORC2Q9Y6X9 1032 aaPredicted RBP11.05□□□□□ -0.64
LINC00555-201ENST00000569288 ELP1O95163 1332 aa11.05□□□□□ -0.64
LINC00555-201ENST00000569288 CYP2D7A0A087X1C5 515 aa11.04□□□□□ -0.64
LINC00555-201ENST00000569288 F8W031 263 aaPredicted RBP11.04□□□□□ -0.64
LINC00555-201ENST00000569288 H3BQV1 296 aa11.04□□□□□ -0.64
LINC00555-201ENST00000569288 EGFRP00533 1210 aa11.04□□□□□ -0.64
LINC00555-201ENST00000569288 CYP2D6P10635 497 aa11.04□□□□□ -0.64
LINC00555-201ENST00000569288 ADD1P35611 737 aaKnown RBP11.04□□□□□ -0.64
LINC00555-201ENST00000569288 RBM5P52756 815 aaKnown RBP eCLIP11.04□□□□□ -0.64
LINC00555-201ENST00000569288 CCT2P78371 535 aaKnown RBP11.04□□□□□ -0.64
LINC00555-201ENST00000569288 STK3Q13188 491 aa11.04□□□□□ -0.64
LINC00555-201ENST00000569288 TBC1D10BQ4KMP7 808 aaPredicted RBP11.04□□□□□ -0.64
LINC00555-201ENST00000569288 IFFO2Q5TF58 517 aa11.04□□□□□ -0.64
LINC00555-201ENST00000569288 GALNT17Q6IS24 598 aa11.04□□□□□ -0.64
LINC00555-201ENST00000569288 LARP6Q9BRS8 491 aaKnown RBP11.04□□□□□ -0.64
LINC00555-201ENST00000569288 DDX4Q9NQI0 724 aaKnown RBP11.04□□□□□ -0.64
LINC00555-201ENST00000569288 GPHNQ9NQX3 736 aaPredicted RBP11.04□□□□□ -0.64
LINC00555-201ENST00000569288 SH3GLB2Q9NR46 395 aa11.04□□□□□ -0.64
LINC00555-201ENST00000569288 MTMR4Q9NYA4 1195 aa11.04□□□□□ -0.64
LINC00555-201ENST00000569288 NYAP2Q9P242 653 aa11.04□□□□□ -0.64
LINC00555-201ENST00000569288 ZNF70Q9UC06 446 aaPredicted RBP11.04□□□□□ -0.64
LINC00555-201ENST00000569288 hCG_1984214I3L0E3 225 aa11.03□□□□□ -0.64
LINC00555-201ENST00000569288 TTLL1O95922 423 aa11.03□□□□□ -0.64
LINC00555-201ENST00000569288 MBD3O95983 291 aa11.03□□□□□ -0.64
LINC00555-201ENST00000569288 AKAP17AQ02040 695 aaKnown RBP11.03□□□□□ -0.64
LINC00555-201ENST00000569288 FUT2Q10981 343 aa11.03□□□□□ -0.64
LINC00555-201ENST00000569288 GRM4Q14833 912 aa11.03□□□□□ -0.64
LINC00555-201ENST00000569288 TMEM179Q6ZVK1 233 aa11.03□□□□□ -0.64
LINC00555-201ENST00000569288 TMTC3Q6ZXV5 915 aa11.03□□□□□ -0.64
LINC00555-201ENST00000569288 NBPF11Q86T75 865 aa11.03□□□□□ -0.64
LINC00555-201ENST00000569288 ZNF713Q8N859 430 aaPredicted RBP11.03□□□□□ -0.64
LINC00555-201ENST00000569288 PNMA1Q8ND90 353 aa11.03□□□□□ -0.64
LINC00555-201ENST00000569288 C8orf76Q96K31 380 aa11.03□□□□□ -0.64
LINC00555-201ENST00000569288 ZNF396Q96N95 335 aaPredicted RBP11.03□□□□□ -0.64
LINC00555-201ENST00000569288 ISY1Q9ULR0 285 aaKnown RBP11.03□□□□□ -0.64
LINC00555-201ENST00000569288 PPP2R3BQ9Y5P8 575 aa11.03□□□□□ -0.64
LINC00555-201ENST00000569288 DDX60LQ5H9U9 1706 aaKnown RBP11.02□□□□□ -0.65
LINC00555-201ENST00000569288 PALM3A6NDB9 673 aaPredicted RBP11.02□□□□□ -0.65
LINC00555-201ENST00000569288 JAK2O60674 1132 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 ITGBL1O95965 494 aaPredicted RBP11.02□□□□□ -0.65
LINC00555-201ENST00000569288 POTEIP0CG38 1075 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 POTEJP0CG39 1038 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 SNHG28P0DPA3 235 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 NCLP19338 710 aaKnown RBP11.02□□□□□ -0.65
LINC00555-201ENST00000569288 U2AF2P26368 475 aaKnown RBP eCLIP11.02□□□□□ -0.65
LINC00555-201ENST00000569288 CDC27P30260 824 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 SHMT1P34896 483 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 KRT85P78386 507 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 PKP1Q13835 747 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 TRIM29Q14134 588 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 KLHL40Q2TBA0 621 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 NBPF9Q3BBW0 867 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 EAPPQ56P03 285 aaPredicted RBP11.02□□□□□ -0.65
LINC00555-201ENST00000569288 GPATCH4Q5T3I0 446 aaKnown RBP11.02□□□□□ -0.65
LINC00555-201ENST00000569288 CDC37L1Q7L3B6 337 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 MICU3Q86XE3 530 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 DYNLL2Q96FJ2 89 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 TMEM47Q9BQJ4 181 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 SPZ1Q9BXG8 430 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 FOXP1Q9H334 677 aaPredicted RBP11.02□□□□□ -0.65
LINC00555-201ENST00000569288 PASKQ96RG2 1323 aa11.02□□□□□ -0.65
LINC00555-201ENST00000569288 LAMB1P07942 1786 aa11.01□□□□□ -0.65
LINC00555-201ENST00000569288 PRDM1O75626 825 aa11.01□□□□□ -0.65
LINC00555-201ENST00000569288 NFIAQ12857 509 aa11.01□□□□□ -0.65
LINC00555-201ENST00000569288 TRAF1Q13077 416 aa11.01□□□□□ -0.65
LINC00555-201ENST00000569288 SAFBQ15424 915 aaKnown RBP eCLIP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms