RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 FAM13CQ8NE31 585 aa5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 BCL7CQ8WUZ0 217 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 TNKS2Q9H2K2 1166 aa5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 KLHL3Q9UH77 587 aa5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 GTF2IRD1Q9UHL9 959 aa5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 TPX2Q9ULW0 747 aaKnown RBP5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 MAPK8IP1Q9UQF2 711 aa5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 OAS3Q9Y6K5 1087 aaKnown RBP5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 LAMC3Q9Y6N6 1575 aa5.54□□□□□ -1.52
HMGB1P6-201ENST00000569046 ATE1O95260 518 aa5.53□□□□□ -1.52
HMGB1P6-201ENST00000569046 IFI16Q16666 785 aaKnown RBP5.53□□□□□ -1.52
HMGB1P6-201ENST00000569046 SFRP5Q5T4F7 317 aa5.53□□□□□ -1.52
HMGB1P6-201ENST00000569046 DIEXFQ68CQ4 756 aaKnown RBP5.53□□□□□ -1.52
HMGB1P6-201ENST00000569046 GK5Q6ZS86 529 aa5.53□□□□□ -1.52
HMGB1P6-201ENST00000569046 ARHGAP27Q6ZUM4 889 aa5.53□□□□□ -1.52
HMGB1P6-201ENST00000569046 VSIG10LQ86VR7 867 aa5.53□□□□□ -1.52
HMGB1P6-201ENST00000569046 NT5DC4Q86YG4 428 aa5.53□□□□□ -1.52
HMGB1P6-201ENST00000569046 SLFN12Q8IYM2 578 aa5.53□□□□□ -1.52
HMGB1P6-201ENST00000569046 NKD1Q969G9 470 aa5.53□□□□□ -1.52
HMGB1P6-201ENST00000569046 PAK6Q9NQU5 681 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P6-201ENST00000569046 COL17A1Q9UMD9 1497 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P6-201ENST00000569046 SLC22A31A6NKX4 558 aa5.52□□□□□ -1.53
HMGB1P6-201ENST00000569046 ZNF865P0CJ78 1059 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P6-201ENST00000569046 FLCNQ8NFG4 579 aa5.52□□□□□ -1.53
HMGB1P6-201ENST00000569046 BAHD1Q8TBE0 780 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P6-201ENST00000569046 CYB5D2Q8WUJ1 264 aa5.52□□□□□ -1.53
HMGB1P6-201ENST00000569046 ANTXR1Q9H6X2 564 aa5.52□□□□□ -1.53
HMGB1P6-201ENST00000569046 EHMT1Q9H9B1 1298 aa5.52□□□□□ -1.53
HMGB1P6-201ENST00000569046 ANGEL1Q9UNK9 670 aaKnown RBP5.52□□□□□ -1.53
HMGB1P6-201ENST00000569046 CEP131Q9UPN4 1083 aa5.52□□□□□ -1.53
HMGB1P6-201ENST00000569046 GNAT3A8MTJ3 354 aa5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 CBX7O95931 251 aa5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 CD8BP10966 210 aa5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 MCM4P33991 863 aa5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 YARSP54577 528 aaKnown RBP5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 PRKCQQ04759 706 aa5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 RAD51AP2Q09MP3 1159 aa5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 AOC3Q16853 763 aa5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 ARSHQ5FYA8 562 aa5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 C22orf34Q6ZV56 151 aa5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 ABI1Q8IZP0 508 aa5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 REXO1Q8N1G1 1221 aaKnown RBP5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 Q96M66 194 aa5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 KIF2CQ99661 725 aa5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 SLC5A6Q9Y289 635 aa5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 CAPN6Q9Y6Q1 641 aa5.51□□□□□ -1.53
HMGB1P6-201ENST00000569046 TMEM265A0A087WTH1 108 aa5.5□□□□□ -1.53
HMGB1P6-201ENST00000569046 TNK2Q07912 1038 aa5.5□□□□□ -1.53
HMGB1P6-201ENST00000569046 PAK2Q13177 524 aa5.5□□□□□ -1.53
HMGB1P6-201ENST00000569046 CDKAL1Q5VV42 579 aa5.5□□□□□ -1.53
HMGB1P6-201ENST00000569046 OVOS1Q6IE37 1185 aa5.5□□□□□ -1.53
HMGB1P6-201ENST00000569046 ZNF654Q8IZM8 581 aa5.5□□□□□ -1.53
HMGB1P6-201ENST00000569046 MFSD4AQ8N468 514 aa5.5□□□□□ -1.53
HMGB1P6-201ENST00000569046 MISP3Q96FF7 219 aa5.5□□□□□ -1.53
HMGB1P6-201ENST00000569046 HRASLS5Q96KN8 279 aa5.5□□□□□ -1.53
HMGB1P6-201ENST00000569046 HSPA12BQ96MM6 686 aa5.5□□□□□ -1.53
HMGB1P6-201ENST00000569046 SEMA3GQ9NS98 782 aa5.5□□□□□ -1.53
HMGB1P6-201ENST00000569046 GMIPQ9P107 970 aa5.5□□□□□ -1.53
HMGB1P6-201ENST00000569046 VAV3Q9UKW4 847 aa5.5□□□□□ -1.53
HMGB1P6-201ENST00000569046 ST14Q9Y5Y6 855 aa5.5□□□□□ -1.53
HMGB1P6-201ENST00000569046 MROH2BQ7Z745 1585 aa5.5□□□□□ -1.53
HMGB1P6-201ENST00000569046 RIMBP3CA6NJZ7 1639 aa5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 RIMBP3BA6NNM3 1639 aa5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 RIMBP3Q9UFD9 1639 aa5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 LRRN2O75325 713 aa5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 UBOX5O94941 541 aa5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 POLR2BP30876 1174 aaKnown RBP5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 ETV3P41162 512 aa5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 RBM25P49756 843 aaKnown RBP5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 ZNF746Q6NUN9 644 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 TP53INP2Q8IXH6 220 aa5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 STK11IPQ8N1F8 1099 aa5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 ATG4CQ96DT6 458 aa5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 CCDC74BQ96LY2 380 aa5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 FBXL18Q96ME1 805 aa5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 SNX11Q9Y5W9 270 aa5.49□□□□□ -1.53
HMGB1P6-201ENST00000569046 PITPNM2Q9BZ72 1349 aa5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 PDS5BQ9NTI5 1447 aa5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 WIZO95785 1651 aa5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 WASH4PA8MWX3 477 aa5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 FAM155AB1AL88 458 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 RGS13O14921 159 aa5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 TNNI2P48788 182 aa5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 ZNF165P49910 485 aa5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 CLCN7P51798 805 aa5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 CDCP2Q5VXM1 449 aa5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 PHACTR4Q8IZ21 702 aa5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 VWCEQ96DN2 955 aa5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 ACBD3Q9H3P7 528 aa5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 CNNM2Q9H8M5 875 aa5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 ADGRE2Q9UHX3 823 aa5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 PPT2Q9UMR5 302 aa5.48□□□□□ -1.53
HMGB1P6-201ENST00000569046 MRC2Q9UBG0 1479 aa5.47□□□□□ -1.53
HMGB1P6-201ENST00000569046 H3BS24 57 aa5.47□□□□□ -1.53
HMGB1P6-201ENST00000569046 RAG1P15918 1043 aa5.47□□□□□ -1.53
HMGB1P6-201ENST00000569046 FUT4P22083 530 aa5.47□□□□□ -1.53
HMGB1P6-201ENST00000569046 CYP7A1P22680 504 aa5.47□□□□□ -1.53
HMGB1P6-201ENST00000569046 KIR3DL1P43629 444 aa5.47□□□□□ -1.53
HMGB1P6-201ENST00000569046 NLRC3Q7RTR2 1065 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms