RNA–Protein interactions for RNA: ENST00000568858.1

CBFB-209, Transcript of core-binding factor subunit beta, humanhuman

TSL 3

Gene CBFB, Length 914 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-209ENST00000568858 FAM196AQ6ZSG2 479 aa9.77□□□□□ -0.85
CBFB-209ENST00000568858 REC114Q7Z4M0 266 aa9.77□□□□□ -0.85
CBFB-209ENST00000568858 KRTAP4-12Q9BQ66 201 aa9.77□□□□□ -0.85
CBFB-209ENST00000568858 PRDM7Q9NQW5 492 aa9.77□□□□□ -0.85
CBFB-209ENST00000568858 REV1Q9UBZ9 1251 aa9.77□□□□□ -0.85
CBFB-209ENST00000568858 SUPT16HQ9Y5B9 1047 aaKnown RBP9.77□□□□□ -0.85
CBFB-209ENST00000568858 HTR3BO95264 441 aa9.76□□□□□ -0.85
CBFB-209ENST00000568858 TMPRSS7Q7RTY8 843 aa9.76□□□□□ -0.85
CBFB-209ENST00000568858 FAM168AQ92567 244 aa9.76□□□□□ -0.85
CBFB-209ENST00000568858 TRIT1Q9H3H1 467 aaKnown RBP9.76□□□□□ -0.85
CBFB-209ENST00000568858 GGT7Q9UJ14 662 aa9.76□□□□□ -0.85
CBFB-209ENST00000568858 KCNH3Q9ULD8 1083 aa9.76□□□□□ -0.85
CBFB-209ENST00000568858 YBX3P16989 372 aaKnown RBP eCLIP9.75□□□□□ -0.851e-7■□□□□ 9.7
CBFB-209ENST00000568858 EIF4A3P38919 411 aaKnown RBP9.75□□□□□ -0.85
CBFB-209ENST00000568858 TNNI2P48788 182 aa9.75□□□□□ -0.85
CBFB-209ENST00000568858 UBE2FQ969M7 185 aa9.75□□□□□ -0.85
CBFB-209ENST00000568858 KCNQ5Q9NR82 932 aa9.75□□□□□ -0.85
CBFB-209ENST00000568858 ZSWIM5Q9P217 1185 aa9.75□□□□□ -0.85
CBFB-209ENST00000568858 KLHL3Q9UH77 587 aa9.75□□□□□ -0.85
CBFB-209ENST00000568858 GRIN3BO60391 1043 aa9.74□□□□□ -0.85
CBFB-209ENST00000568858 GARTP22102 1010 aa9.74□□□□□ -0.85
CBFB-209ENST00000568858 CHMP4BP1P59074 171 aa9.74□□□□□ -0.85
CBFB-209ENST00000568858 OGFOD2Q6N063 350 aa9.74□□□□□ -0.85
CBFB-209ENST00000568858 CCDC74BQ96LY2 380 aa9.74□□□□□ -0.85
CBFB-209ENST00000568858 LRRC3Q9BY71 257 aa9.74□□□□□ -0.85
CBFB-209ENST00000568858 POLR3KQ9Y2Y1 108 aaPredicted RBP9.74□□□□□ -0.85
CBFB-209ENST00000568858 UPK3BL1B0FP48 263 aa9.73□□□□□ -0.85
CBFB-209ENST00000568858 UPK3BL2E5RIL1 263 aa9.73□□□□□ -0.85
CBFB-209ENST00000568858 AFMP43652 599 aa9.73□□□□□ -0.85
CBFB-209ENST00000568858 POU5F2Q8N7G0 328 aa9.73□□□□□ -0.85
CBFB-209ENST00000568858 PPP1R13LQ8WUF5 828 aa9.73□□□□□ -0.85
CBFB-209ENST00000568858 RNF141Q8WVD5 230 aa9.73□□□□□ -0.85
CBFB-209ENST00000568858 TMEM40Q8WWA1 233 aa9.73□□□□□ -0.85
CBFB-209ENST00000568858 COPRSQ9NQ92 184 aa9.73□□□□□ -0.85
CBFB-209ENST00000568858 GPATCH2Q9NW75 528 aa9.73□□□□□ -0.85
CBFB-209ENST00000568858 CTNND2Q9UQB3 1225 aa9.73□□□□□ -0.85
CBFB-209ENST00000568858 FBXL19Q6PCT2 694 aa9.72□□□□□ -0.85
CBFB-209ENST00000568858 ZSWIM9Q86XI8 627 aa9.72□□□□□ -0.85
CBFB-209ENST00000568858 PHACTR4Q8IZ21 702 aa9.72□□□□□ -0.85
CBFB-209ENST00000568858 FBXO27Q8NI29 283 aa9.72□□□□□ -0.85
CBFB-209ENST00000568858 TLR3O15455 904 aaKnown RBP9.71□□□□□ -0.86
CBFB-209ENST00000568858 KCNMB1Q16558 191 aa9.71□□□□□ -0.86
CBFB-209ENST00000568858 Q96M66 194 aa9.71□□□□□ -0.86
CBFB-209ENST00000568858 ALPK1Q96QP1 1244 aa9.71□□□□□ -0.86
CBFB-209ENST00000568858 ASPNQ9BXN1 380 aa9.71□□□□□ -0.86
CBFB-209ENST00000568858 CARMIL2Q6F5E8 1435 aa9.71□□□□□ -0.86
CBFB-209ENST00000568858 ZNF16P17020 682 aaPredicted RBP9.7□□□□□ -0.86
CBFB-209ENST00000568858 GDNFP39905 211 aa9.7□□□□□ -0.86
CBFB-209ENST00000568858 HOMEZQ8IX15 550 aa9.7□□□□□ -0.86
CBFB-209ENST00000568858 DTWD2Q8NBA8 298 aa9.7□□□□□ -0.86
CBFB-209ENST00000568858 ZNF296Q8WUU4 475 aaPredicted RBP9.7□□□□□ -0.86
CBFB-209ENST00000568858 GPR62Q9BZJ7 368 aa9.7□□□□□ -0.86
CBFB-209ENST00000568858 CHURC1-FNTBB4DL54 471 aa9.69□□□□□ -0.86
CBFB-209ENST00000568858 GREM1O60565 184 aa9.69□□□□□ -0.86
CBFB-209ENST00000568858 MFAP1P55081 439 aaKnown RBP9.69□□□□□ -0.86
CBFB-209ENST00000568858 TMEM87AQ8NBN3 555 aa9.69□□□□□ -0.86
CBFB-209ENST00000568858 FAM53CQ9NYF3 392 aa9.69□□□□□ -0.86
CBFB-209ENST00000568858 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.69□□□□□ -0.86
CBFB-209ENST00000568858 TPP2P29144 1249 aaPredicted RBP9.68□□□□□ -0.86
CBFB-209ENST00000568858 GBP1P32455 592 aa9.68□□□□□ -0.86
CBFB-209ENST00000568858 CREG2Q8IUH2 290 aa9.68□□□□□ -0.86
CBFB-209ENST00000568858 KREMEN1Q96MU8 473 aa9.68□□□□□ -0.86
CBFB-209ENST00000568858 DUSP15Q9H1R2 295 aaPredicted RBP9.68□□□□□ -0.86
CBFB-209ENST00000568858 BRMS1Q9HCU9 246 aa9.68□□□□□ -0.86
CBFB-209ENST00000568858 SLAMF8Q9P0V8 285 aa9.68□□□□□ -0.86
CBFB-209ENST00000568858 GMIPQ9P107 970 aa9.68□□□□□ -0.86
CBFB-209ENST00000568858 PCDHB14Q9Y5E9 798 aa9.68□□□□□ -0.86
CBFB-209ENST00000568858 RAC2P15153 192 aa9.67□□□□□ -0.86
CBFB-209ENST00000568858 KRTAP19-1Q8IUB9 90 aa9.67□□□□□ -0.86
CBFB-209ENST00000568858 BAHD1Q8TBE0 780 aaPredicted RBP9.67□□□□□ -0.86
CBFB-209ENST00000568858 KIRREL1Q96J84 757 aa9.67□□□□□ -0.86
CBFB-209ENST00000568858 DUSP13Q9UII6 198 aa9.67□□□□□ -0.86
CBFB-209ENST00000568858 FARP2O94887 1054 aaPredicted RBP9.66□□□□□ -0.86
CBFB-209ENST00000568858 ATE1O95260 518 aa9.66□□□□□ -0.86
CBFB-209ENST00000568858 RAG1P15918 1043 aa9.66□□□□□ -0.86
CBFB-209ENST00000568858 RNF4P78317 190 aa9.66□□□□□ -0.86
CBFB-209ENST00000568858 APOBRQ0VD83 1088 aa9.66□□□□□ -0.86
CBFB-209ENST00000568858 LCE3BQ5TA77 95 aa9.66□□□□□ -0.86
CBFB-209ENST00000568858 KIF2CQ99661 725 aa9.66□□□□□ -0.86
CBFB-209ENST00000568858 RGS13O14921 159 aa9.65□□□□□ -0.86
CBFB-209ENST00000568858 ESR1P03372 595 aa9.65□□□□□ -0.86
CBFB-209ENST00000568858 SRFP11831 508 aa9.65□□□□□ -0.86
CBFB-209ENST00000568858 ZNF76P36508 570 aa9.65□□□□□ -0.86
CBFB-209ENST00000568858 GAB4Q2WGN9 574 aa9.65□□□□□ -0.86
CBFB-209ENST00000568858 TSPYL5Q86VY4 417 aaPredicted RBP9.65□□□□□ -0.86
CBFB-209ENST00000568858 SYTL4Q96C24 671 aaPredicted RBP9.65□□□□□ -0.86
CBFB-209ENST00000568858 ASCC2Q9H1I8 757 aaPredicted RBP9.65□□□□□ -0.86
CBFB-209ENST00000568858 ADAMTS1Q9UHI8 967 aa9.65□□□□□ -0.86
CBFB-209ENST00000568858 TMEM59LQ9UK28 342 aa9.65□□□□□ -0.86
CBFB-209ENST00000568858 SLC22A31A6NKX4 558 aa9.64□□□□□ -0.87
CBFB-209ENST00000568858 DNAJA2O60884 412 aa9.64□□□□□ -0.87
CBFB-209ENST00000568858 GLI1P08151 1106 aa9.64□□□□□ -0.87
CBFB-209ENST00000568858 LTKP29376 864 aa9.64□□□□□ -0.87
CBFB-209ENST00000568858 ZNF165P49910 485 aa9.64□□□□□ -0.87
CBFB-209ENST00000568858 SEZ6Q53EL9 994 aa9.64□□□□□ -0.87
CBFB-209ENST00000568858 ARSHQ5FYA8 562 aa9.64□□□□□ -0.87
CBFB-209ENST00000568858 REXO1Q8N1G1 1221 aaKnown RBP9.64□□□□□ -0.87
CBFB-209ENST00000568858 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.64□□□□□ -0.87
CBFB-209ENST00000568858 EHMT1Q9H9B1 1298 aa9.64□□□□□ -0.87
CBFB-209ENST00000568858 METTL5Q9NRN9 209 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms