RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 CEP85Q6P2H3 762 aa7.61□□□□□ -1.19
CAPN3-218ENST00000568153 SND1Q7KZF4 910 aaKnown RBP eCLIP7.61□□□□□ -1.19
CAPN3-218ENST00000568153 CHD1LQ86WJ1 897 aa7.61□□□□□ -1.19
CAPN3-218ENST00000568153 MARCH10Q8NA82 808 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-218ENST00000568153 LINS1Q8NG48 757 aa7.61□□□□□ -1.19
CAPN3-218ENST00000568153 SYTL4Q96C24 671 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-218ENST00000568153 BACH2Q9BYV9 841 aa7.61□□□□□ -1.19
CAPN3-218ENST00000568153 C9orf78Q9NZ63 289 aaPredicted RBP7.61□□□□□ -1.19
CAPN3-218ENST00000568153 RGS12O14924 1447 aa7.61□□□□□ -1.19
CAPN3-218ENST00000568153 FAM208AQ9UK61 1670 aaKnown RBP7.6□□□□□ -1.19
CAPN3-218ENST00000568153 NDUFB5O43674 189 aa7.6□□□□□ -1.19
CAPN3-218ENST00000568153 MAP3K6O95382 1288 aa7.6□□□□□ -1.19
CAPN3-218ENST00000568153 RPLP1P05386 114 aaKnown RBP7.6□□□□□ -1.19
CAPN3-218ENST00000568153 USP5P45974 858 aa7.6□□□□□ -1.19
CAPN3-218ENST00000568153 PDE12Q6L8Q7 609 aaKnown RBP7.6□□□□□ -1.19
CAPN3-218ENST00000568153 PLBD2Q8NHP8 589 aa7.6□□□□□ -1.19
CAPN3-218ENST00000568153 METTL22Q9BUU2 404 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-218ENST00000568153 GZF1Q9H116 711 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-218ENST00000568153 TMEM63CQ9P1W3 806 aa7.6□□□□□ -1.19
CAPN3-218ENST00000568153 COL14A1Q05707 1796 aaKnown RBP7.6□□□□□ -1.19
CAPN3-218ENST00000568153 PHLPP1O60346 1717 aa7.6□□□□□ -1.19
CAPN3-218ENST00000568153 DISP2A7MBM2 1401 aa7.6□□□□□ -1.19
CAPN3-218ENST00000568153 LRRC37A3O60309 1634 aa7.6□□□□□ -1.19
CAPN3-218ENST00000568153 COL22A1Q8NFW1 1626 aaPredicted RBP7.6□□□□□ -1.19
CAPN3-218ENST00000568153 SLIT2O94813 1529 aa7.59□□□□□ -1.19
CAPN3-218ENST00000568153 MMP20O60882 483 aa7.59□□□□□ -1.19
CAPN3-218ENST00000568153 XKR5Q6UX68 686 aa7.59□□□□□ -1.19
CAPN3-218ENST00000568153 ZNF438Q7Z4V0 828 aa7.59□□□□□ -1.19
CAPN3-218ENST00000568153 IGFLR1Q9H665 355 aa7.59□□□□□ -1.19
CAPN3-218ENST00000568153 ELP3Q9H9T3 547 aa7.59□□□□□ -1.19
CAPN3-218ENST00000568153 DCTN4Q9UJW0 460 aa7.59□□□□□ -1.19
CAPN3-218ENST00000568153 LRRFIP2Q9Y608 721 aaKnown RBP7.59□□□□□ -1.19
CAPN3-218ENST00000568153 IGHA2P01877 340 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 NBPF7P0C2Y1 421 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-218ENST00000568153 COL8A1P27658 744 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 MAPK1P28482 360 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 ADH7P40394 386 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 PIP4K2AP48426 406 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-218ENST00000568153 TBC1D8BQ0IIM8 1120 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 DHX32Q7L7V1 743 aaKnown RBP7.58□□□□□ -1.2
CAPN3-218ENST00000568153 LRP10Q7Z4F1 713 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 NPM2Q86SE8 214 aaKnown RBP7.58□□□□□ -1.2
CAPN3-218ENST00000568153 DNAJC10Q8IXB1 793 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 TTC16Q8NEE8 873 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 SMARCC1Q92922 1105 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-218ENST00000568153 ACSBG1Q96GR2 724 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 FAM129BQ96TA1 746 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 MYD88Q99836 296 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 RBCK1Q9BYM8 510 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 UBE2OQ9C0C9 1292 aaKnown RBP7.58□□□□□ -1.2
CAPN3-218ENST00000568153 LNPKQ9C0E8 428 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 SUV39H2Q9H5I1 410 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 ABI2Q9NYB9 513 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-218ENST00000568153 TLR7Q9NYK1 1049 aaKnown RBP7.58□□□□□ -1.2
CAPN3-218ENST00000568153 STARD13Q9Y3M8 1113 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 COL16A1Q07092 1604 aaPredicted RBP7.58□□□□□ -1.2
CAPN3-218ENST00000568153 ADCY9O60503 1353 aa7.58□□□□□ -1.2
CAPN3-218ENST00000568153 BCL9LQ86UU0 1499 aa7.57□□□□□ -1.2
CAPN3-218ENST00000568153 ZBTB42B2RXF5 422 aa7.57□□□□□ -1.2
CAPN3-218ENST00000568153 GRM8O00222 908 aa7.57□□□□□ -1.2
CAPN3-218ENST00000568153 GNB5O14775 395 aa7.57□□□□□ -1.2
CAPN3-218ENST00000568153 RAB11FIP3O75154 756 aa7.57□□□□□ -1.2
CAPN3-218ENST00000568153 IGKV5-2P06315 115 aa7.57□□□□□ -1.2
CAPN3-218ENST00000568153 CYP19A1P11511 503 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-218ENST00000568153 ALAS2P22557 587 aa7.57□□□□□ -1.2
CAPN3-218ENST00000568153 EHHADHQ08426 723 aa7.57□□□□□ -1.2
CAPN3-218ENST00000568153 GCKRQ14397 625 aa7.57□□□□□ -1.2
CAPN3-218ENST00000568153 CWF19L2Q2TBE0 894 aaKnown RBP7.57□□□□□ -1.2
CAPN3-218ENST00000568153 HSP90AB4PQ58FF6 505 aa7.57□□□□□ -1.2
CAPN3-218ENST00000568153 PPP1R42Q7Z4L9 355 aa7.57□□□□□ -1.2
CAPN3-218ENST00000568153 SSH3Q8TE77 659 aa7.57□□□□□ -1.2
CAPN3-218ENST00000568153 CITED4Q96RK1 184 aa7.57□□□□□ -1.2
CAPN3-218ENST00000568153 DNAJB12Q9NXW2 375 aaKnown RBP7.57□□□□□ -1.2
CAPN3-218ENST00000568153 CNTN3Q9P232 1028 aa7.57□□□□□ -1.2
CAPN3-218ENST00000568153 TRPC5Q9UL62 973 aaPredicted RBP7.57□□□□□ -1.2
CAPN3-218ENST00000568153 ATP10DQ9P241 1426 aa7.57□□□□□ -1.2
CAPN3-218ENST00000568153 MRC1P22897 1456 aa7.56□□□□□ -1.2
CAPN3-218ENST00000568153 UTYO14607 1347 aa7.56□□□□□ -1.2
CAPN3-218ENST00000568153 AFF2P51816 1311 aa7.56□□□□□ -1.2
CAPN3-218ENST00000568153 BCL9O00512 1426 aa7.56□□□□□ -1.2
CAPN3-218ENST00000568153 PNMA6EA0A0J9YXQ4 647 aa7.56□□□□□ -1.2
CAPN3-218ENST00000568153 GPR182O15218 404 aa7.56□□□□□ -1.2
CAPN3-218ENST00000568153 SRGAP3O43295 1099 aa7.56□□□□□ -1.2
CAPN3-218ENST00000568153 ITGB2P05107 769 aa7.56□□□□□ -1.2
CAPN3-218ENST00000568153 KIF6Q6ZMV9 814 aa7.56□□□□□ -1.2
CAPN3-218ENST00000568153 TTLL7Q6ZT98 887 aa7.56□□□□□ -1.2
CAPN3-218ENST00000568153 OR13H1Q8NG92 308 aa7.56□□□□□ -1.2
CAPN3-218ENST00000568153 FOXD3Q9UJU5 478 aaPredicted RBP7.56□□□□□ -1.2
CAPN3-218ENST00000568153 ADAMTS7Q9UKP4 1686 aa7.56□□□□□ -1.2
CAPN3-218ENST00000568153 A0A087WZG4 1122 aa7.55□□□□□ -1.2
CAPN3-218ENST00000568153 KCNQ2O43526 872 aa7.55□□□□□ -1.2
CAPN3-218ENST00000568153 TNFRSF21O75509 655 aa7.55□□□□□ -1.2
CAPN3-218ENST00000568153 SURF6O75683 361 aaKnown RBP7.55□□□□□ -1.2
CAPN3-218ENST00000568153 ALBP02768 609 aa7.55□□□□□ -1.2
CAPN3-218ENST00000568153 CYP2E1P05181 493 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-218ENST00000568153 PSAPP07602 524 aa7.55□□□□□ -1.2
CAPN3-218ENST00000568153 SOX18P35713 384 aa7.55□□□□□ -1.2
CAPN3-218ENST00000568153 MLLT1Q03111 559 aaPredicted RBP7.55□□□□□ -1.2
CAPN3-218ENST00000568153 TRIM28Q13263 835 aaKnown RBP7.55□□□□□ -1.2
CAPN3-218ENST00000568153 TCIRG1Q13488 830 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms