RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 TSPY2A6NKD2 308 aa21.28■■□□□ 1
COMMD4-222ENST00000568034 TSPY3P0CV98 308 aa21.28■■□□□ 1
COMMD4-222ENST00000568034 TSPY8P0CW00 308 aa21.28■■□□□ 1
COMMD4-222ENST00000568034 GRM1Q13255 1194 aa21.28■■□□□ 1
COMMD4-222ENST00000568034 ZNF280CQ8ND82 737 aa21.28■■□□□ 1
COMMD4-222ENST00000568034 CEP95Q96GE4 821 aa21.28■■□□□ 1
COMMD4-222ENST00000568034 TBC1D2Q9BYX2 928 aa21.28■■□□□ 1
COMMD4-222ENST00000568034 IL17RBQ9NRM6 502 aa21.28■■□□□ 1
COMMD4-222ENST00000568034 TRIM75PA6NK02 468 aa21.27■■□□□ 1
COMMD4-222ENST00000568034 CXCL11O14625 94 aa21.27■■□□□ 1
COMMD4-222ENST00000568034 NMT2O60551 498 aa21.27■■□□□ 1
COMMD4-222ENST00000568034 KDM4AO75164 1064 aa21.27■■□□□ 1
COMMD4-222ENST00000568034 NOVP48745 357 aa21.27■■□□□ 1
COMMD4-222ENST00000568034 NT5C2P49902 561 aa21.27■■□□□ 1
COMMD4-222ENST00000568034 ICA1Q05084 483 aa21.27■■□□□ 1
COMMD4-222ENST00000568034 SPP2Q13103 211 aa21.27■■□□□ 1
COMMD4-222ENST00000568034 NOGQ13253 232 aa21.27■■□□□ 1
COMMD4-222ENST00000568034 MOGSQ13724 837 aa21.27■■□□□ 1
COMMD4-222ENST00000568034 MB21D2Q8IYB1 491 aaPredicted RBP21.27■■□□□ 1
COMMD4-222ENST00000568034 ESR2Q92731 530 aa21.27■■□□□ 1
COMMD4-222ENST00000568034 KRT23Q9C075 422 aa21.27■■□□□ 1
COMMD4-222ENST00000568034 CNNM2Q9H8M5 875 aa21.27■■□□□ 1
COMMD4-222ENST00000568034 AS3MTQ9HBK9 375 aa21.27■■□□□ 1
COMMD4-222ENST00000568034 LOC285556D6RIA3 1793 aa21.26■□□□□ 0.99
COMMD4-222ENST00000568034 A0A0G2JLL6 359 aaPredicted RBP21.26■□□□□ 0.99
COMMD4-222ENST00000568034 DGKZQ13574 1117 aa21.26■□□□□ 0.99
COMMD4-222ENST00000568034 RNF20Q5VTR2 975 aa21.26■□□□□ 0.99
COMMD4-222ENST00000568034 CYB5R4Q7L1T6 521 aa21.26■□□□□ 0.99
COMMD4-222ENST00000568034 PRRT2Q7Z6L0 340 aaPredicted RBP21.26■□□□□ 0.99
COMMD4-222ENST00000568034 KANSL2Q9H9L4 492 aa21.26■□□□□ 0.99
COMMD4-222ENST00000568034 TCP11L1Q9NUJ3 509 aa21.26■□□□□ 0.99
COMMD4-222ENST00000568034 MTMR4Q9NYA4 1195 aa21.26■□□□□ 0.99
COMMD4-222ENST00000568034 ZSWIM5Q9P217 1185 aa21.26■□□□□ 0.99
COMMD4-222ENST00000568034 SNX14Q9Y5W7 946 aa21.26■□□□□ 0.99
COMMD4-222ENST00000568034 TESPA1A2RU30 521 aaPredicted RBP21.25■□□□□ 0.99
COMMD4-222ENST00000568034 EEF2P13639 858 aaKnown RBP21.25■□□□□ 0.99
COMMD4-222ENST00000568034 BACE1P56817 501 aa21.25■□□□□ 0.99
COMMD4-222ENST00000568034 KIF23Q02241 960 aaPredicted RBP21.25■□□□□ 0.99
COMMD4-222ENST00000568034 MTMR2Q13614 643 aa21.25■□□□□ 0.99
COMMD4-222ENST00000568034 ADCK5Q3MIX3 580 aa21.25■□□□□ 0.99
COMMD4-222ENST00000568034 NCOA7Q8NI08 942 aa21.25■□□□□ 0.99
COMMD4-222ENST00000568034 BRI3BPQ8WY22 251 aa21.25■□□□□ 0.99
COMMD4-222ENST00000568034 NYAP2Q9P242 653 aa21.25■□□□□ 0.99
COMMD4-222ENST00000568034 GTF2A2P52657 109 aa21.24■□□□□ 0.99
COMMD4-222ENST00000568034 ANTXR2P58335 489 aa21.24■□□□□ 0.99
COMMD4-222ENST00000568034 SNAPC2Q13487 334 aa21.24■□□□□ 0.99
COMMD4-222ENST00000568034 SH3D19Q5HYK7 790 aa21.24■□□□□ 0.99
COMMD4-222ENST00000568034 MANSC4A6NHS7 340 aaPredicted RBP21.23■□□□□ 0.99
COMMD4-222ENST00000568034 USP17L10C9JJH3 530 aa21.23■□□□□ 0.99
COMMD4-222ENST00000568034 EIF5BO60841 1220 aaKnown RBP21.23■□□□□ 0.99
COMMD4-222ENST00000568034 MAP2K2P36507 400 aa21.23■□□□□ 0.99
COMMD4-222ENST00000568034 TRDNQ13061 729 aa21.23■□□□□ 0.99
COMMD4-222ENST00000568034 KIAA1755Q5JYT7 1200 aa21.23■□□□□ 0.99
COMMD4-222ENST00000568034 RCSD1Q6JBY9 416 aa21.23■□□□□ 0.99
COMMD4-222ENST00000568034 PTPN18Q99952 460 aa21.23■□□□□ 0.99
COMMD4-222ENST00000568034 ZKSCAN3Q9BRR0 538 aa21.23■□□□□ 0.99
COMMD4-222ENST00000568034 KIAA1683Q9H0B3 1180 aa21.23■□□□□ 0.99
COMMD4-222ENST00000568034 EMILIN3Q9NT22 766 aa21.23■□□□□ 0.99
COMMD4-222ENST00000568034 TMX2Q9Y320 296 aa21.23■□□□□ 0.99
COMMD4-222ENST00000568034 MYH4Q9Y623 1939 aa21.22■□□□□ 0.99
COMMD4-222ENST00000568034 CCL15-CCL14A0A0B4J2E2 113 aa21.22■□□□□ 0.99
COMMD4-222ENST00000568034 ZKSCAN1P17029 563 aaPredicted RBP21.22■□□□□ 0.99
COMMD4-222ENST00000568034 HMGCS2P54868 508 aa21.22■□□□□ 0.99
COMMD4-222ENST00000568034 CCL15Q16663 113 aa21.22■□□□□ 0.99
COMMD4-222ENST00000568034 RALYLQ86SE5 291 aaKnown RBP21.22■□□□□ 0.99
COMMD4-222ENST00000568034 MKL1Q969V6 931 aa21.22■□□□□ 0.99
COMMD4-222ENST00000568034 C12orf42Q96LP6 360 aa21.22■□□□□ 0.99
COMMD4-222ENST00000568034 ARHGEF10LQ9HCE6 1279 aa21.22■□□□□ 0.99
COMMD4-222ENST00000568034 TTLL1O95922 423 aa21.21■□□□□ 0.99
COMMD4-222ENST00000568034 CETPP11597 493 aa21.21■□□□□ 0.99
COMMD4-222ENST00000568034 TM4SF4P48230 202 aa21.21■□□□□ 0.99
COMMD4-222ENST00000568034 KRT32Q14532 448 aa21.21■□□□□ 0.99
COMMD4-222ENST00000568034 GPAT2Q6NUI2 795 aa21.21■□□□□ 0.99
COMMD4-222ENST00000568034 IL17RAQ96F46 866 aa21.21■□□□□ 0.99
COMMD4-222ENST00000568034 FEZ1Q99689 392 aa21.21■□□□□ 0.99
COMMD4-222ENST00000568034 BACH2Q9BYV9 841 aa21.21■□□□□ 0.99
COMMD4-222ENST00000568034 CLIP2Q9UDT6 1046 aa21.21■□□□□ 0.99
COMMD4-222ENST00000568034 C19orf81C9J6K1 198 aa21.2■□□□□ 0.98
COMMD4-222ENST00000568034 IGF2BP3O00425 579 aaKnown RBP eCLIP21.2■□□□□ 0.98
COMMD4-222ENST00000568034 MCCP23508 829 aa21.2■□□□□ 0.98
COMMD4-222ENST00000568034 ATP2B2Q01814 1243 aa21.2■□□□□ 0.98
COMMD4-222ENST00000568034 SEC23AQ15436 765 aa21.2■□□□□ 0.98
COMMD4-222ENST00000568034 ZYXQ15942 572 aaKnown RBP21.2■□□□□ 0.98
COMMD4-222ENST00000568034 USP17L2Q6R6M4 530 aa21.2■□□□□ 0.98
COMMD4-222ENST00000568034 CHST3Q7LGC8 479 aa21.2■□□□□ 0.98
COMMD4-222ENST00000568034 IQCA1Q86XH1 822 aa21.2■□□□□ 0.98
COMMD4-222ENST00000568034 LRRC47Q8N1G4 583 aaKnown RBP21.2■□□□□ 0.98
COMMD4-222ENST00000568034 ENAHQ8N8S7 591 aaPredicted RBP21.2■□□□□ 0.98
COMMD4-222ENST00000568034 PROCA1Q8NCQ7 364 aaPredicted RBP21.2■□□□□ 0.98
COMMD4-222ENST00000568034 ANKS1AQ92625 1134 aa21.2■□□□□ 0.98
COMMD4-222ENST00000568034 NEK1Q96PY6 1258 aa21.2■□□□□ 0.98
COMMD4-222ENST00000568034 ZSCAN10Q96SZ4 725 aaPredicted RBP21.2■□□□□ 0.98
COMMD4-222ENST00000568034 TNKSO95271 1327 aa21.2■□□□□ 0.98
COMMD4-222ENST00000568034 BTBD19C9JJ37 291 aa21.19■□□□□ 0.98
COMMD4-222ENST00000568034 SREBF2Q12772 1141 aa21.19■□□□□ 0.98
COMMD4-222ENST00000568034 TREML2Q5T2D2 321 aa21.19■□□□□ 0.98
COMMD4-222ENST00000568034 VCPKMTQ9H867 229 aa21.19■□□□□ 0.98
COMMD4-222ENST00000568034 SYNPO2Q9UMS6 1093 aa21.19■□□□□ 0.98
COMMD4-222ENST00000568034 STX8Q9UNK0 236 aa21.19■□□□□ 0.98
COMMD4-222ENST00000568034 USP14P54578 494 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 197.4 ms