RNA–Protein interactions for RNA: ENST00000568023.1

CDH5-206, Transcript of cadherin 5, human

TSL 4

Gene CDH5, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH5-206	ENST00000568023	STK36	Q9NRP7	1315 aa		13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	CLRN2	A0PK11	232 aa		13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	SMIM22	K7EJ46	135 aa		13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	MCM4	P33991	863 aa		13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	EPHX2	P34913	555 aa		13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	TNNI2	P48788	182 aa		13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	EVX2	Q03828	476 aa		13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	PKP1	Q13835	747 aa		13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	USP50	Q70EL3	339 aa	Predicted RBP	13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	TRIM22	Q8IYM9	498 aa		13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	NEDD1	Q8NHV4	660 aa		13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	CTCFL	Q8NI51	663 aa	Predicted RBP	13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	NKX2-3	Q8TAU0	364 aa		13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	NUP133	Q8WUM0	1156 aa		13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	WASF1	Q92558	559 aa		13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	PGAP2	Q9UHJ9	254 aa		13.15	□□□□□ -0.3
CDH5-206	ENST00000568023	BAG4	O95429	457 aa	Known RBP	13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	CTDNEP1	O95476	244 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	F13A1	P00488	732 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	KIF5B	P33176	963 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	GABPA	Q06546	454 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	SSRP1	Q08945	709 aa	Known RBP	13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	TCP10	Q12799	353 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	RBM26	Q5T8P6	1007 aa	Known RBP	13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	SH3BP5L	Q7L8J4	393 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	RAB11FIP4	Q86YS3	637 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	ZFPM1	Q8IX07	1006 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	CCDC144CP	Q8IYA2	1237 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	FANCB	Q8NB91	859 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	SLC44A5	Q8NCS7	719 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	RGS22	Q8NE09	1264 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	ANKS1A	Q92625	1134 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	CCDC17	Q96LX7	622 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	MYL10	Q9BUA6	226 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	SENP2	Q9HC62	589 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	ORC3	Q9UBD5	711 aa	Predicted RBP	13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	ZDHHC9	Q9Y397	364 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	TRPM7	Q96QT4	1865 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	OTOF	Q9HC10	1997 aa		13.14	□□□□□ -0.31
CDH5-206	ENST00000568023	IFNAR1	P17181	557 aa		13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	RXRA	P19793	462 aa		13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	AKAP17A	Q02040	695 aa	Known RBP	13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	TNFAIP1	Q13829	316 aa		13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	TRIM29	Q14134	588 aa		13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	CSPP1	Q1MSJ5	1256 aa		13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	FOXD4L5	Q5VV16	416 aa	Predicted RBP	13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	METTL16	Q86W50	562 aa	Known RBP	13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	FOXP4	Q8IVH2	680 aa	Predicted RBP	13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	ZC3H15	Q8WU90	426 aa	Known RBP	13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	FAM151A	Q8WW52	585 aa		13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	MAP3K14	Q99558	947 aa		13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	ANP32E	Q9BTT0	268 aa		13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	VEZT	Q9HBM0	779 aa		13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	GGA3	Q9NZ52	723 aa		13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	STX8	Q9UNK0	236 aa		13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	MTMR6	Q9Y217	621 aa		13.13	□□□□□ -0.31
CDH5-206	ENST00000568023	DDTL	A6NHG4	134 aa	Predicted RBP	13.12	□□□□□ -0.31
CDH5-206	ENST00000568023	TCP10L2	B9ZVM9	353 aa		13.12	□□□□□ -0.31
CDH5-206	ENST00000568023	NMT2	O60551	498 aa		13.12	□□□□□ -0.31
CDH5-206	ENST00000568023	VEGFA	P15692	232 aa	Predicted RBP	13.12	□□□□□ -0.31
CDH5-206	ENST00000568023	ADD1	P35611	737 aa	Known RBP	13.12	□□□□□ -0.31
CDH5-206	ENST00000568023	GNAQ	P50148	359 aa		13.12	□□□□□ -0.31
CDH5-206	ENST00000568023	ANGEL2	Q5VTE6	544 aa	Known RBP	13.12	□□□□□ -0.31
CDH5-206	ENST00000568023	PNMA8A	Q86V59	439 aa	Predicted RBP	13.12	□□□□□ -0.31
CDH5-206	ENST00000568023	PNMA1	Q8ND90	353 aa		13.12	□□□□□ -0.31
CDH5-206	ENST00000568023	C8orf76	Q96K31	380 aa		13.12	□□□□□ -0.31
CDH5-206	ENST00000568023	TEPSIN	Q96N21	525 aa		13.12	□□□□□ -0.31
CDH5-206	ENST00000568023	CSRNP1	Q96S65	589 aa		13.12	□□□□□ -0.31
CDH5-206	ENST00000568023	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.12	□□□□□ -0.31
CDH5-206	ENST00000568023	HERC5	Q9UII4	1024 aa	Known RBP	13.12	□□□□□ -0.31
CDH5-206	ENST00000568023	DOCK1	Q14185	1865 aa		13.12	□□□□□ -0.31
CDH5-206	ENST00000568023	SSC5D	A1L4H1	1573 aa		13.11	□□□□□ -0.31
CDH5-206	ENST00000568023	MPHOSPH10	O00566	681 aa	Known RBP	13.11	□□□□□ -0.31
CDH5-206	ENST00000568023	FMNL1	O95466	1100 aa	Predicted RBP	13.11	□□□□□ -0.31
CDH5-206	ENST00000568023	TOP1	P11387	765 aa	Known RBP	13.11	□□□□□ -0.31
CDH5-206	ENST00000568023	XBP1	P17861	261 aa		13.11	□□□□□ -0.31
CDH5-206	ENST00000568023	CDC27	P30260	824 aa		13.11	□□□□□ -0.31
CDH5-206	ENST00000568023	SHMT1	P34896	483 aa		13.11	□□□□□ -0.31
CDH5-206	ENST00000568023	MCTP1	Q6DN14	999 aa		13.11	□□□□□ -0.31
CDH5-206	ENST00000568023	RCSD1	Q6JBY9	416 aa		13.11	□□□□□ -0.31
CDH5-206	ENST00000568023	SLC26A6	Q9BXS9	759 aa		13.11	□□□□□ -0.31
CDH5-206	ENST00000568023	NMRK2	Q9NPI5	230 aa		13.11	□□□□□ -0.31
CDH5-206	ENST00000568023	IL17RB	Q9NRM6	502 aa		13.11	□□□□□ -0.31
CDH5-206	ENST00000568023	RBM27	Q9P2N5	1060 aa	Known RBP	13.11	□□□□□ -0.31
CDH5-206	ENST00000568023	PPP2R3B	Q9Y5P8	575 aa		13.11	□□□□□ -0.31
CDH5-206	ENST00000568023	TCHH	Q07283	1943 aa		13.11	□□□□□ -0.31
CDH5-206	ENST00000568023	DEXI	O95424	95 aa		13.1	□□□□□ -0.31
CDH5-206	ENST00000568023	MAP3K10	Q02779	954 aa		13.1	□□□□□ -0.31
CDH5-206	ENST00000568023	TROAP	Q12815	778 aa		13.1	□□□□□ -0.31
CDH5-206	ENST00000568023	RASA3	Q14644	834 aa		13.1	□□□□□ -0.31
CDH5-206	ENST00000568023	NTRK3	Q16288	839 aa		13.1	□□□□□ -0.31
CDH5-206	ENST00000568023	SKOR2	Q2VWA4	1001 aa	Predicted RBP	13.1	□□□□□ -0.31
CDH5-206	ENST00000568023	CERKL	Q49MI3	558 aa	Predicted RBP	13.1	□□□□□ -0.31
CDH5-206	ENST00000568023	CDC37L1	Q7L3B6	337 aa		13.1	□□□□□ -0.31
CDH5-206	ENST00000568023	CEP95	Q96GE4	821 aa		13.1	□□□□□ -0.31
CDH5-206	ENST00000568023	LZTS2	Q9BRK4	669 aa		13.1	□□□□□ -0.31
CDH5-206	ENST00000568023	ALG1	Q9BT22	464 aa		13.1	□□□□□ -0.31
CDH5-206	ENST00000568023	RNF26	Q9BY78	433 aa	Predicted RBP	13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms