RNA–Protein interactions for RNA: ENST00000567883.5

FANCA-227, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-227ENST00000567883 CCND3P30281 292 aaPredicted RBP13.53□□□□□ -0.24
FANCA-227ENST00000567883 ZAP70P43403 619 aa13.53□□□□□ -0.24
FANCA-227ENST00000567883 CCNA1P78396 465 aa13.53□□□□□ -0.24
FANCA-227ENST00000567883 USP17L24Q0WX57 530 aa13.53□□□□□ -0.24
FANCA-227ENST00000567883 LBX2Q6XYB7 198 aa13.53□□□□□ -0.24
FANCA-227ENST00000567883 FRAT1Q92837 279 aaPredicted RBP13.53□□□□□ -0.24
FANCA-227ENST00000567883 EDC3Q96F86 508 aaKnown RBP13.53□□□□□ -0.24
FANCA-227ENST00000567883 EHD4Q9H223 541 aa13.53□□□□□ -0.24
FANCA-227ENST00000567883 SAP30BPQ9UHR5 308 aaKnown RBP13.53□□□□□ -0.24
FANCA-227ENST00000567883 NOP58Q9Y2X3 529 aaKnown RBP13.53□□□□□ -0.24
FANCA-227ENST00000567883 VCANP13611 3396 aa13.52□□□□□ -0.24
FANCA-227ENST00000567883 SURF6O75683 361 aaKnown RBP13.52□□□□□ -0.25
FANCA-227ENST00000567883 BCAR3O75815 825 aa13.52□□□□□ -0.25
FANCA-227ENST00000567883 CNMDO75829 334 aa13.52□□□□□ -0.25
FANCA-227ENST00000567883 CYP7A1P22680 504 aa13.52□□□□□ -0.25
FANCA-227ENST00000567883 USP14P54578 494 aa13.52□□□□□ -0.25
FANCA-227ENST00000567883 DYNLL1P63167 89 aaKnown RBP13.52□□□□□ -0.25
FANCA-227ENST00000567883 MAP2K5Q13163 448 aa13.52□□□□□ -0.25
FANCA-227ENST00000567883 OS9Q13438 667 aaPredicted RBP13.52□□□□□ -0.25
FANCA-227ENST00000567883 LRRC26Q2I0M4 334 aa13.52□□□□□ -0.25
FANCA-227ENST00000567883 CATSPERGQ6ZRH7 1159 aa13.52□□□□□ -0.25
FANCA-227ENST00000567883 TMEM57Q8N5G2 664 aa13.52□□□□□ -0.25
FANCA-227ENST00000567883 CLUAP1Q96AJ1 413 aa13.52□□□□□ -0.25
FANCA-227ENST00000567883 KIAA1683Q9H0B3 1180 aa13.52□□□□□ -0.25
FANCA-227ENST00000567883 PIH1D3Q9NQM4 214 aaKnown RBP13.52□□□□□ -0.25
FANCA-227ENST00000567883 MTMR10Q9NXD2 777 aa13.52□□□□□ -0.25
FANCA-227ENST00000567883 SERPINB13Q9UIV8 391 aa13.52□□□□□ -0.25
FANCA-227ENST00000567883 DBNLQ9UJU6 430 aaKnown RBP13.52□□□□□ -0.25
FANCA-227ENST00000567883 PRUNE2Q8WUY3 3088 aa13.52□□□□□ -0.25
FANCA-227ENST00000567883 SLC15A5A6NIM6 579 aa13.51□□□□□ -0.25
FANCA-227ENST00000567883 HOXC6P09630 235 aa13.51□□□□□ -0.25
FANCA-227ENST00000567883 PTPREP23469 700 aa13.51□□□□□ -0.25
FANCA-227ENST00000567883 MFSD14CQ5VZR4 134 aa13.51□□□□□ -0.25
FANCA-227ENST00000567883 Q7L0L9 218 aa13.51□□□□□ -0.25
FANCA-227ENST00000567883 CWC22Q9HCG8 908 aaKnown RBP13.51□□□□□ -0.25
FANCA-227ENST00000567883 CCER2I3L3R5 266 aa13.5□□□□□ -0.25
FANCA-227ENST00000567883 MSCO60682 206 aa13.5□□□□□ -0.25
FANCA-227ENST00000567883 USP5P45974 858 aa13.5□□□□□ -0.25
FANCA-227ENST00000567883 CERKLQ49MI3 558 aaPredicted RBP13.5□□□□□ -0.25
FANCA-227ENST00000567883 ZKSCAN2Q63HK3 967 aa13.5□□□□□ -0.25
FANCA-227ENST00000567883 TTC6Q86TZ1 520 aa13.5□□□□□ -0.25
FANCA-227ENST00000567883 FEZ1Q99689 392 aa13.5□□□□□ -0.25
FANCA-227ENST00000567883 FLRT1Q9NZU1 646 aa13.5□□□□□ -0.25
FANCA-227ENST00000567883 IDH1O75874 414 aaKnown RBP13.49□□□□□ -0.25
FANCA-227ENST00000567883 IGHA2P01877 340 aa13.49□□□□□ -0.25
FANCA-227ENST00000567883 VCAM1P19320 739 aa13.49□□□□□ -0.25
FANCA-227ENST00000567883 GRB14Q14449 540 aa13.49□□□□□ -0.25
FANCA-227ENST00000567883 RAB3GAP1Q15042 981 aa13.49□□□□□ -0.25
FANCA-227ENST00000567883 ABCB5Q2M3G0 1257 aa13.49□□□□□ -0.25
FANCA-227ENST00000567883 FAM109BQ6ICB4 259 aaPredicted RBP13.49□□□□□ -0.25
FANCA-227ENST00000567883 MAGEB6Q8N7X4 407 aa13.49□□□□□ -0.25
FANCA-227ENST00000567883 MIGA1Q8NAN2 632 aa13.49□□□□□ -0.25
FANCA-227ENST00000567883 LPAR1Q92633 364 aa13.49□□□□□ -0.25
FANCA-227ENST00000567883 EAF2Q96CJ1 260 aaPredicted RBP13.49□□□□□ -0.25
FANCA-227ENST00000567883 CABP5Q9NP86 173 aa13.49□□□□□ -0.25
FANCA-227ENST00000567883 TLR7Q9NYK1 1049 aaKnown RBP13.49□□□□□ -0.25
FANCA-227ENST00000567883 IVNS1ABPQ9Y6Y0 642 aa13.49□□□□□ -0.25
FANCA-227ENST00000567883 POTEB2H3BUK9 544 aa13.48□□□□□ -0.25
FANCA-227ENST00000567883 MDM2Q00987 491 aaPredicted RBP13.48□□□□□ -0.25
FANCA-227ENST00000567883 ATP2B2Q01814 1243 aa13.48□□□□□ -0.25
FANCA-227ENST00000567883 MAP3K12Q12852 859 aa13.48□□□□□ -0.25
FANCA-227ENST00000567883 ZYXQ15942 572 aaKnown RBP13.48□□□□□ -0.25
FANCA-227ENST00000567883 ACER1Q8TDN7 264 aa13.48□□□□□ -0.25
FANCA-227ENST00000567883 SENP6Q9GZR1 1112 aaPredicted RBP13.48□□□□□ -0.25
FANCA-227ENST00000567883 CCDC8Q9H0W5 538 aaPredicted RBP13.48□□□□□ -0.25
FANCA-227ENST00000567883 BTBD7Q9P203 1132 aa13.48□□□□□ -0.25
FANCA-227ENST00000567883 DDX20Q9UHI6 824 aaKnown RBP13.48□□□□□ -0.25
FANCA-227ENST00000567883 ZNF236Q9UL36 1845 aa13.48□□□□□ -0.25
FANCA-227ENST00000567883 RLFQ13129 1914 aa13.47□□□□□ -0.25
FANCA-227ENST00000567883 CDH23Q9H251 3354 aa13.47□□□□□ -0.25
FANCA-227ENST00000567883 SPDYE16A6NNV3 312 aaPredicted RBP13.47□□□□□ -0.25
FANCA-227ENST00000567883 DNM1LO00429 736 aa13.47□□□□□ -0.25
FANCA-227ENST00000567883 STRNO43815 780 aa13.47□□□□□ -0.25
FANCA-227ENST00000567883 SHMT1P34896 483 aa13.47□□□□□ -0.25
FANCA-227ENST00000567883 WDR78Q5VTH9 848 aa13.47□□□□□ -0.25
FANCA-227ENST00000567883 NDUFB9Q9Y6M9 179 aa13.47□□□□□ -0.25
FANCA-227ENST00000567883 CYBAP13498 195 aa13.46□□□□□ -0.25
FANCA-227ENST00000567883 GUCY1A2P33402 732 aa13.46□□□□□ -0.25
FANCA-227ENST00000567883 PLCD1P51178 756 aa13.46□□□□□ -0.25
FANCA-227ENST00000567883 GABPAQ06546 454 aa13.46□□□□□ -0.25
FANCA-227ENST00000567883 NPLOC4Q8TAT6 608 aa13.46□□□□□ -0.25
FANCA-227ENST00000567883 LBHD1Q9BQE6 289 aaPredicted RBP13.46□□□□□ -0.25
FANCA-227ENST00000567883 RIOK1Q9BRS2 568 aaKnown RBP13.46□□□□□ -0.25
FANCA-227ENST00000567883 RPAP3Q9H6T3 665 aaPredicted RBP13.46□□□□□ -0.25
FANCA-227ENST00000567883 ANTXR1Q9H6X2 564 aa13.46□□□□□ -0.25
FANCA-227ENST00000567883 C1orf115Q9H7X2 142 aa13.46□□□□□ -0.25
FANCA-227ENST00000567883 HOXC10Q9NYD6 342 aa13.46□□□□□ -0.25
FANCA-227ENST00000567883 SPTBN5Q9NRC6 3674 aaKnown RBP13.46□□□□□ -0.26
FANCA-227ENST00000567883 NAV1Q8NEY1 1877 aa13.45□□□□□ -0.26
FANCA-227ENST00000567883 CNGA1P29973 690 aa13.45□□□□□ -0.26
FANCA-227ENST00000567883 CYP2C19P33261 490 aa13.45□□□□□ -0.26
FANCA-227ENST00000567883 COG2Q14746 738 aa13.45□□□□□ -0.26
FANCA-227ENST00000567883 OLFML2BQ68BL8 750 aa13.45□□□□□ -0.26
FANCA-227ENST00000567883 ARRDC4Q8NCT1 418 aa13.45□□□□□ -0.26
FANCA-227ENST00000567883 SHCBP1Q8NEM2 672 aa13.45□□□□□ -0.26
FANCA-227ENST00000567883 TRPV1Q8NER1 839 aa13.45□□□□□ -0.26
FANCA-227ENST00000567883 LTBP2Q14767 1821 aa13.45□□□□□ -0.26
FANCA-227ENST00000567883 ZNFX1Q9P2E3 1918 aaKnown RBP13.45□□□□□ -0.26
FANCA-227ENST00000567883 A0A0G2JMZ2 1700 aa13.44□□□□□ -0.26
FANCA-227ENST00000567883 POLR3DP05423 398 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms