RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 RBM27Q9P2N5 1060 aaKnown RBP18.54■□□□□ 0.56
CDR2-206ENST00000567406 DDX19BQ9UMR2 479 aa18.54■□□□□ 0.56
CDR2-206ENST00000567406 TCRBV5S4A2TA0A5A2 114 aa18.53■□□□□ 0.56
CDR2-206ENST00000567406 TTF1Q15361 905 aaPredicted RBP18.53■□□□□ 0.56
CDR2-206ENST00000567406 CERS3Q8IU89 383 aa18.53■□□□□ 0.56
CDR2-206ENST00000567406 MCM9Q9NXL9 1143 aa18.53■□□□□ 0.56
CDR2-206ENST00000567406 SMIM22K7EJ46 135 aa18.52■□□□□ 0.56
CDR2-206ENST00000567406 PRKAB2O43741 272 aa18.52■□□□□ 0.56
CDR2-206ENST00000567406 HMMRO75330 724 aa18.52■□□□□ 0.56
CDR2-206ENST00000567406 CNMDO75829 334 aa18.52■□□□□ 0.56
CDR2-206ENST00000567406 SEPT2Q15019 361 aa18.52■□□□□ 0.56
CDR2-206ENST00000567406 CCL14Q16627 93 aa18.52■□□□□ 0.56
CDR2-206ENST00000567406 SLC44A5Q8NCS7 719 aa18.52■□□□□ 0.56
CDR2-206ENST00000567406 NUDT12Q9BQG2 462 aa18.52■□□□□ 0.56
CDR2-206ENST00000567406 CRNKL1Q9BZJ0 848 aaKnown RBP18.52■□□□□ 0.56
CDR2-206ENST00000567406 ARMT1Q9H993 441 aa18.52■□□□□ 0.56
CDR2-206ENST00000567406 CABP5Q9NP86 173 aa18.52■□□□□ 0.56
CDR2-206ENST00000567406 RCAN3Q9UKA8 241 aa18.52■□□□□ 0.56
CDR2-206ENST00000567406 RPTORQ8N122 1335 aa18.51■□□□□ 0.55
CDR2-206ENST00000567406 MPHOSPH10O00566 681 aaKnown RBP18.51■□□□□ 0.55
CDR2-206ENST00000567406 SMARCA5O60264 1052 aaPredicted RBP18.51■□□□□ 0.55
CDR2-206ENST00000567406 EVI5O60447 810 aa18.51■□□□□ 0.55
CDR2-206ENST00000567406 VCAM1P19320 739 aa18.51■□□□□ 0.55
CDR2-206ENST00000567406 GABPAQ06546 454 aa18.51■□□□□ 0.55
CDR2-206ENST00000567406 CATSPERGQ6ZRH7 1159 aa18.51■□□□□ 0.55
CDR2-206ENST00000567406 GPR142Q7Z601 462 aa18.51■□□□□ 0.55
CDR2-206ENST00000567406 CCAR1Q8IX12 1150 aaKnown RBP18.51■□□□□ 0.55
CDR2-206ENST00000567406 DYNLL2Q96FJ2 89 aa18.51■□□□□ 0.55
CDR2-206ENST00000567406 HMX1Q9NP08 348 aaPredicted RBP18.51■□□□□ 0.55
CDR2-206ENST00000567406 NAV1Q8NEY1 1877 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 USP17L15C9J2P7 530 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 USP17L13C9JLJ4 530 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 USP17L11C9JVI0 530 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 USP17L18D6R9N7 530 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 USP17L22D6RA61 530 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 USP17L17D6RBQ6 530 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 USP17L19D6RCP7 530 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 USP17L20D6RJB6 530 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 RAB11FIP3O75154 756 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 PRKAR2AP13861 404 aaKnown RBP18.5■□□□□ 0.55
CDR2-206ENST00000567406 MAPK4P31152 587 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 USP17L24Q0WX57 530 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 WDR78Q5VTH9 848 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 PLEKHH3Q7Z736 793 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.5■□□□□ 0.55
CDR2-206ENST00000567406 C12orf42Q96LP6 360 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 KIAA1683Q9H0B3 1180 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 DCP1AQ9NPI6 582 aaPredicted RBP18.5■□□□□ 0.55
CDR2-206ENST00000567406 PAG1Q9NWQ8 432 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 NR2E3Q9Y5X4 410 aa18.5■□□□□ 0.55
CDR2-206ENST00000567406 DDX60LQ5H9U9 1706 aaKnown RBP18.49■□□□□ 0.55
CDR2-206ENST00000567406 CYP2D7A0A087X1C5 515 aa18.49■□□□□ 0.55
CDR2-206ENST00000567406 A0A1W2PRG0 241 aa18.49■□□□□ 0.55
CDR2-206ENST00000567406 MNX1P50219 401 aaPredicted RBP18.49■□□□□ 0.55
CDR2-206ENST00000567406 PDE3AQ14432 1141 aa18.49■□□□□ 0.55
CDR2-206ENST00000567406 MORN1Q5T089 497 aa18.49■□□□□ 0.55
CDR2-206ENST00000567406 USP6NLQ92738 828 aa18.49■□□□□ 0.55
CDR2-206ENST00000567406 RPAP3Q9H6T3 665 aaPredicted RBP18.49■□□□□ 0.55
CDR2-206ENST00000567406 CWC22Q9HCG8 908 aaKnown RBP18.49■□□□□ 0.55
CDR2-206ENST00000567406 BTBD7Q9P203 1132 aa18.49■□□□□ 0.55
CDR2-206ENST00000567406 ALPK3Q96L96 1907 aa18.49■□□□□ 0.55
CDR2-206ENST00000567406 MBD4O95243 580 aa18.48■□□□□ 0.55
CDR2-206ENST00000567406 ZKSCAN1P17029 563 aaPredicted RBP18.48■□□□□ 0.55
CDR2-206ENST00000567406 CCND3P30281 292 aaPredicted RBP18.48■□□□□ 0.55
CDR2-206ENST00000567406 ADD2P35612 726 aa18.48■□□□□ 0.55
CDR2-206ENST00000567406 USP14P54578 494 aa18.48■□□□□ 0.55
CDR2-206ENST00000567406 CACNB2Q08289 660 aaPredicted RBP18.48■□□□□ 0.55
CDR2-206ENST00000567406 KIAA1755Q5JYT7 1200 aa18.48■□□□□ 0.55
CDR2-206ENST00000567406 TMED8Q6PL24 325 aaPredicted RBP18.48■□□□□ 0.55
CDR2-206ENST00000567406 NECAB2Q7Z6G3 386 aa18.48■□□□□ 0.55
CDR2-206ENST00000567406 CLEC10AQ8IUN9 316 aa18.48■□□□□ 0.55
CDR2-206ENST00000567406 SOCS4Q8WXH5 440 aa18.48■□□□□ 0.55
CDR2-206ENST00000567406 RABGAP1Q9Y3P9 1069 aa18.48■□□□□ 0.55
CDR2-206ENST00000567406 XRCC5P13010 732 aaKnown RBP18.47■□□□□ 0.55
CDR2-206ENST00000567406 ATP5JP18859 108 aa18.47■□□□□ 0.55
CDR2-206ENST00000567406 MAP3K21Q5TCX8 1036 aa18.47■□□□□ 0.55
CDR2-206ENST00000567406 GTF3C2Q8WUA4 911 aaPredicted RBP18.47■□□□□ 0.55
CDR2-206ENST00000567406 HAUS7Q99871 368 aa18.47■□□□□ 0.55
CDR2-206ENST00000567406 FLRT1Q9NZU1 646 aa18.47■□□□□ 0.55
CDR2-206ENST00000567406 STAP2Q9UGK3 403 aa18.47■□□□□ 0.55
CDR2-206ENST00000567406 SPDYE16A6NNV3 312 aaPredicted RBP18.46■□□□□ 0.55
CDR2-206ENST00000567406 RGS2P41220 211 aa18.46■□□□□ 0.55
CDR2-206ENST00000567406 C7orf61Q8IZ16 206 aa18.46■□□□□ 0.55
CDR2-206ENST00000567406 PRO3102Q9H379 93 aa18.46■□□□□ 0.55
CDR2-206ENST00000567406 ZMYND8Q9ULU4 1186 aaPredicted RBP18.46■□□□□ 0.55
CDR2-206ENST00000567406 BAZ2AQ9UIF9 1905 aaKnown RBP18.46■□□□□ 0.55
CDR2-206ENST00000567406 AKR1B1P15121 316 aa18.45■□□□□ 0.54
CDR2-206ENST00000567406 MAP2K5Q13163 448 aa18.45■□□□□ 0.54
CDR2-206ENST00000567406 OGDHLQ9ULD0 1010 aa18.45■□□□□ 0.54
CDR2-206ENST00000567406 LAMA3Q16787 3333 aa18.45■□□□□ 0.54
CDR2-206ENST00000567406 SYN1P17600 705 aa18.44■□□□□ 0.54
CDR2-206ENST00000567406 SAMD1Q6SPF0 538 aaPredicted RBP18.44■□□□□ 0.54
CDR2-206ENST00000567406 SIAH1Q8IUQ4 282 aa18.44■□□□□ 0.54
CDR2-206ENST00000567406 SPICE1Q8N0Z3 855 aa18.44■□□□□ 0.54
CDR2-206ENST00000567406 APBA2Q99767 749 aa18.44■□□□□ 0.54
CDR2-206ENST00000567406 LRRCC1Q9C099 1032 aa18.44■□□□□ 0.54
CDR2-206ENST00000567406 TANGO6Q9C0B7 1094 aa18.44■□□□□ 0.54
CDR2-206ENST00000567406 NBPF3Q9H094 633 aa18.44■□□□□ 0.54
CDR2-206ENST00000567406 C11orf49Q9H6J7 331 aa18.44■□□□□ 0.54
CDR2-206ENST00000567406 USP17L12C9JPN9 530 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms