RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 TRIT1Q9H3H1 467 aaKnown RBP6.15□□□□□ -1.42
CDH1-211ENST00000567320 C19orf73Q9NVV2 129 aa6.15□□□□□ -1.42
CDH1-211ENST00000567320 DNAJC25-GNG10A0A024R161 153 aa6.14□□□□□ -1.43
CDH1-211ENST00000567320 WASH4PA8MWX3 477 aa6.14□□□□□ -1.43
CDH1-211ENST00000567320 NFIBO00712 420 aa6.14□□□□□ -1.43
CDH1-211ENST00000567320 TPP2P29144 1249 aaPredicted RBP6.14□□□□□ -1.43
CDH1-211ENST00000567320 TNNI2P48788 182 aa6.14□□□□□ -1.43
CDH1-211ENST00000567320 RALGPS1Q5JS13 557 aa6.14□□□□□ -1.43
CDH1-211ENST00000567320 MCATQ8IVS2 390 aaKnown RBP6.14□□□□□ -1.43
CDH1-211ENST00000567320 BHLHE22Q8NFJ8 381 aaPredicted RBP6.14□□□□□ -1.43
CDH1-211ENST00000567320 SYTL4Q96C24 671 aaPredicted RBP6.14□□□□□ -1.43
CDH1-211ENST00000567320 CEP131Q9UPN4 1083 aa6.14□□□□□ -1.43
CDH1-211ENST00000567320 YARSP54577 528 aaKnown RBP6.13□□□□□ -1.43
CDH1-211ENST00000567320 CHMP4BP1P59074 171 aa6.13□□□□□ -1.43
CDH1-211ENST00000567320 FBXO15Q8NCQ5 510 aaPredicted RBP6.13□□□□□ -1.43
CDH1-211ENST00000567320 ZSCAN18Q8TBC5 510 aaPredicted RBP6.13□□□□□ -1.43
CDH1-211ENST00000567320 MYLIPQ8WY64 445 aa6.13□□□□□ -1.43
CDH1-211ENST00000567320 ACSF2Q96CM8 615 aaPredicted RBP6.13□□□□□ -1.43
CDH1-211ENST00000567320 FAM161BQ96MY7 647 aa6.13□□□□□ -1.43
CDH1-211ENST00000567320 DCP1AQ9NPI6 582 aaPredicted RBP6.13□□□□□ -1.43
CDH1-211ENST00000567320 GPATCH2Q9NW75 528 aa6.13□□□□□ -1.43
CDH1-211ENST00000567320 TMEM59LQ9UK28 342 aa6.13□□□□□ -1.43
CDH1-211ENST00000567320 ADAM30Q9UKF2 790 aa6.13□□□□□ -1.43
CDH1-211ENST00000567320 KCNH3Q9ULD8 1083 aa6.13□□□□□ -1.43
CDH1-211ENST00000567320 CORINQ9Y5Q5 1042 aa6.13□□□□□ -1.43
CDH1-211ENST00000567320 UPK3BL1B0FP48 263 aa6.12□□□□□ -1.43
CDH1-211ENST00000567320 UPK3BL2E5RIL1 263 aa6.12□□□□□ -1.43
CDH1-211ENST00000567320 ESR1P03372 595 aa6.12□□□□□ -1.43
CDH1-211ENST00000567320 TMEM253P0C7T8 217 aa6.12□□□□□ -1.43
CDH1-211ENST00000567320 LTKP29376 864 aa6.12□□□□□ -1.43
CDH1-211ENST00000567320 ERVFC1P60507 584 aa6.12□□□□□ -1.43
CDH1-211ENST00000567320 LCE1DQ5T752 114 aa6.12□□□□□ -1.43
CDH1-211ENST00000567320 BNC2Q6ZN30 1099 aaPredicted RBP6.12□□□□□ -1.43
CDH1-211ENST00000567320 SND1Q7KZF4 910 aaKnown RBP eCLIP6.12□□□□□ -1.43
CDH1-211ENST00000567320 NOC4LQ9BVI4 516 aaKnown RBP6.12□□□□□ -1.43
CDH1-211ENST00000567320 ADAMTS10Q9H324 1103 aa6.12□□□□□ -1.43
CDH1-211ENST00000567320 EPB41L4BQ9H329 900 aa6.12□□□□□ -1.43
CDH1-211ENST00000567320 MRS2Q9HD23 443 aa6.12□□□□□ -1.43
CDH1-211ENST00000567320 DUSP13Q9UII6 198 aa6.12□□□□□ -1.43
CDH1-211ENST00000567320 TSPAN15O95858 294 aa6.11□□□□□ -1.43
CDH1-211ENST00000567320 ST13P50502 369 aaKnown RBP6.11□□□□□ -1.43
CDH1-211ENST00000567320 DAB2P98082 770 aa6.11□□□□□ -1.43
CDH1-211ENST00000567320 EGR3Q06889 387 aa6.11□□□□□ -1.43
CDH1-211ENST00000567320 FBLN7Q53RD9 439 aa6.11□□□□□ -1.43
CDH1-211ENST00000567320 LRRC56Q8IYG6 542 aaPredicted RBP6.11□□□□□ -1.43
CDH1-211ENST00000567320 PHC3Q8NDX5 983 aa6.11□□□□□ -1.43
CDH1-211ENST00000567320 DNAJB8Q8NHS0 232 aa6.11□□□□□ -1.43
CDH1-211ENST00000567320 CYB5D2Q8WUJ1 264 aa6.11□□□□□ -1.43
CDH1-211ENST00000567320 Q96M66 194 aa6.11□□□□□ -1.43
CDH1-211ENST00000567320 KCNK12Q9HB15 430 aa6.11□□□□□ -1.43
CDH1-211ENST00000567320 KLHL3Q9UH77 587 aa6.11□□□□□ -1.43
CDH1-211ENST00000567320 C1QTNF9P0C862 333 aa6.1□□□□□ -1.43
CDH1-211ENST00000567320 CFPP27918 469 aa6.1□□□□□ -1.43
CDH1-211ENST00000567320 GBP2P32456 591 aaPredicted RBP6.1□□□□□ -1.43
CDH1-211ENST00000567320 CAMK2GQ13555 558 aaPredicted RBP6.1□□□□□ -1.43
CDH1-211ENST00000567320 SPOCD1Q6ZMY3 1216 aa6.1□□□□□ -1.43
CDH1-211ENST00000567320 RELL1Q8IUW5 271 aa6.1□□□□□ -1.43
CDH1-211ENST00000567320 DUSP15Q9H1R2 295 aaPredicted RBP6.1□□□□□ -1.43
CDH1-211ENST00000567320 VTI1BQ9UEU0 232 aa6.1□□□□□ -1.43
CDH1-211ENST00000567320 GRIN3BO60391 1043 aa6.09□□□□□ -1.43
CDH1-211ENST00000567320 PF4P02776 101 aa6.09□□□□□ -1.43
CDH1-211ENST00000567320 TRHRP34981 398 aaPredicted RBP6.09□□□□□ -1.43
CDH1-211ENST00000567320 CLEC16AQ2KHT3 1053 aa6.09□□□□□ -1.43
CDH1-211ENST00000567320 SNAP47Q5SQN1 464 aa6.09□□□□□ -1.43
CDH1-211ENST00000567320 PHACTR4Q8IZ21 702 aa6.09□□□□□ -1.43
CDH1-211ENST00000567320 DTWD2Q8NBA8 298 aa6.09□□□□□ -1.43
CDH1-211ENST00000567320 C19orf44Q9H6X5 657 aa6.09□□□□□ -1.43
CDH1-211ENST00000567320 MINDY4BA8MYZ0 360 aa6.08□□□□□ -1.44
CDH1-211ENST00000567320 SORBS3O60504 671 aa6.08□□□□□ -1.44
CDH1-211ENST00000567320 LRRN2O75325 713 aa6.08□□□□□ -1.44
CDH1-211ENST00000567320 F13A1P00488 732 aa6.08□□□□□ -1.44
CDH1-211ENST00000567320 PDIA4P13667 645 aaKnown RBP6.08□□□□□ -1.44
CDH1-211ENST00000567320 FAM160A1Q05DH4 1040 aa6.08□□□□□ -1.44
CDH1-211ENST00000567320 TMC4Q7Z404 712 aa6.08□□□□□ -1.44
CDH1-211ENST00000567320 CCDC84Q86UT8 332 aaPredicted RBP6.08□□□□□ -1.44
CDH1-211ENST00000567320 OXR1Q8N573 874 aa6.08□□□□□ -1.44
CDH1-211ENST00000567320 GATAD2BQ8WXI9 593 aa6.08□□□□□ -1.44
CDH1-211ENST00000567320 KCNN1Q92952 543 aa6.08□□□□□ -1.44
CDH1-211ENST00000567320 USP31Q70CQ4 1352 aa6.07□□□□□ -1.44
CDH1-211ENST00000567320 TCAF2A6NFQ2 919 aa6.07□□□□□ -1.44
CDH1-211ENST00000567320 NPIPB6E9PJ23 425 aa6.07□□□□□ -1.44
CDH1-211ENST00000567320 CILPO75339 1184 aa6.07□□□□□ -1.44
CDH1-211ENST00000567320 HPXP02790 462 aa6.07□□□□□ -1.44
CDH1-211ENST00000567320 CTSHP09668 335 aa6.07□□□□□ -1.44
CDH1-211ENST00000567320 ZSCAN22P10073 491 aaPredicted RBP6.07□□□□□ -1.44
CDH1-211ENST00000567320 LMNB2Q03252 620 aa6.07□□□□□ -1.44
CDH1-211ENST00000567320 KRTAP19-4Q3LI73 84 aa6.07□□□□□ -1.44
CDH1-211ENST00000567320 ATG14Q6ZNE5 492 aa6.07□□□□□ -1.44
CDH1-211ENST00000567320 TSPYL5Q86VY4 417 aaPredicted RBP6.07□□□□□ -1.44
CDH1-211ENST00000567320 PPP1R13LQ8WUF5 828 aa6.07□□□□□ -1.44
CDH1-211ENST00000567320 DHX38Q92620 1227 aaKnown RBP6.07□□□□□ -1.44
CDH1-211ENST00000567320 CRELD1Q96HD1 420 aa6.07□□□□□ -1.44
CDH1-211ENST00000567320 GPR62Q9BZJ7 368 aa6.07□□□□□ -1.44
CDH1-211ENST00000567320 ASCC2Q9H1I8 757 aaPredicted RBP6.07□□□□□ -1.44
CDH1-211ENST00000567320 REV1Q9UBZ9 1251 aa6.07□□□□□ -1.44
CDH1-211ENST00000567320 PCDHA11Q9Y5I1 949 aa6.07□□□□□ -1.44
CDH1-211ENST00000567320 CHURC1-FNTBB4DL54 471 aa6.06□□□□□ -1.44
CDH1-211ENST00000567320 GBP1P32455 592 aa6.06□□□□□ -1.44
CDH1-211ENST00000567320 MLECQ14165 292 aa6.06□□□□□ -1.44
CDH1-211ENST00000567320 GAB4Q2WGN9 574 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms