RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 CAMK4Q16566 473 aa26.84■■□□□ 1.89
LINC00543-201ENST00000567234 MRPS27Q92552 414 aaKnown RBP26.84■■□□□ 1.89
LINC00543-201ENST00000567234 ANKS1AQ92625 1134 aa26.84■■□□□ 1.89
LINC00543-201ENST00000567234 FOXP1Q9H334 677 aaPredicted RBP26.84■■□□□ 1.89
LINC00543-201ENST00000567234 ZNF287Q9HBT7 754 aa26.84■■□□□ 1.89
LINC00543-201ENST00000567234 PRPF3O43395 683 aaKnown RBP26.83■■□□□ 1.89
LINC00543-201ENST00000567234 SNW1Q13573 536 aaKnown RBP26.83■■□□□ 1.89
LINC00543-201ENST00000567234 DGKHQ86XP1 1220 aa26.83■■□□□ 1.89
LINC00543-201ENST00000567234 MYH1P12882 1939 aa26.83■■□□□ 1.89
LINC00543-201ENST00000567234 DPP8Q6V1X1 898 aaPredicted RBP26.83■■□□□ 1.89
LINC00543-201ENST00000567234 FSIP1Q8NA03 581 aa26.83■■□□□ 1.89
LINC00543-201ENST00000567234 GOLPH3LQ9H4A5 285 aa26.83■■□□□ 1.89
LINC00543-201ENST00000567234 TCP11L1Q9NUJ3 509 aa26.83■■□□□ 1.89
LINC00543-201ENST00000567234 SPTLC3Q9NUV7 552 aa26.83■■□□□ 1.89
LINC00543-201ENST00000567234 PPP6R2O75170 966 aa26.82■■□□□ 1.88
LINC00543-201ENST00000567234 XBP1P17861 261 aa26.82■■□□□ 1.88
LINC00543-201ENST00000567234 TYRO3Q06418 890 aa26.82■■□□□ 1.88
LINC00543-201ENST00000567234 FAM47AQ5JRC9 791 aa26.82■■□□□ 1.88
LINC00543-201ENST00000567234 STYK1Q6J9G0 422 aa26.82■■□□□ 1.88
LINC00543-201ENST00000567234 NOSTRINQ8IVI9 506 aa26.82■■□□□ 1.88
LINC00543-201ENST00000567234 MAP3K14Q99558 947 aa26.82■■□□□ 1.88
LINC00543-201ENST00000567234 PTMAP06454 111 aaKnown RBP26.81■■□□□ 1.88
LINC00543-201ENST00000567234 GTF2IP78347 998 aa26.81■■□□□ 1.88
LINC00543-201ENST00000567234 TEX11Q8IYF3 940 aa26.81■■□□□ 1.88
LINC00543-201ENST00000567234 JMYQ8N9B5 988 aa26.81■■□□□ 1.88
LINC00543-201ENST00000567234 CTCFLQ8NI51 663 aaPredicted RBP26.81■■□□□ 1.88
LINC00543-201ENST00000567234 EYA3Q99504 573 aa26.81■■□□□ 1.88
LINC00543-201ENST00000567234 UBE2Q2LH0YL09 131 aa26.81■■□□□ 1.88
LINC00543-201ENST00000567234 KINO60870 393 aaKnown RBP26.81■■□□□ 1.88
LINC00543-201ENST00000567234 RHBDL3P58872 404 aa26.81■■□□□ 1.88
LINC00543-201ENST00000567234 TMTC3Q6ZXV5 915 aa26.81■■□□□ 1.88
LINC00543-201ENST00000567234 SGIP1Q9BQI5 828 aa26.81■■□□□ 1.88
LINC00543-201ENST00000567234 MKNK2Q9HBH9 465 aa26.81■■□□□ 1.88
LINC00543-201ENST00000567234 ZNF219Q9P2Y4 722 aaPredicted RBP26.81■■□□□ 1.88
LINC00543-201ENST00000567234 CAVIN2O95810 425 aa26.8■■□□□ 1.88
LINC00543-201ENST00000567234 POLD1P28340 1107 aa26.8■■□□□ 1.88
LINC00543-201ENST00000567234 TFAP4Q01664 338 aa26.8■■□□□ 1.88
LINC00543-201ENST00000567234 RCSD1Q6JBY9 416 aa26.8■■□□□ 1.88
LINC00543-201ENST00000567234 RIMBP2O15034 1052 aa26.79■■□□□ 1.88
LINC00543-201ENST00000567234 MAPKAPK5Q8IW41 473 aa26.79■■□□□ 1.88
LINC00543-201ENST00000567234 CKAP2LQ8IYA6 745 aa26.79■■□□□ 1.88
LINC00543-201ENST00000567234 DIS3L2Q8IYB7 885 aaKnown RBP26.79■■□□□ 1.88
LINC00543-201ENST00000567234 FMR1NBQ8N0W7 255 aaPredicted RBP26.79■■□□□ 1.88
LINC00543-201ENST00000567234 CMTR1Q8N1G2 835 aaKnown RBP26.79■■□□□ 1.88
LINC00543-201ENST00000567234 CCDC82Q8N4S0 544 aa26.79■■□□□ 1.88
LINC00543-201ENST00000567234 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.79■■□□□ 1.88
LINC00543-201ENST00000567234 MRVI1Q9Y6F6 885 aa26.79■■□□□ 1.88
LINC00543-201ENST00000567234 PTPAQ15257 358 aa26.79■■□□□ 1.88
LINC00543-201ENST00000567234 ZNF444Q8N0Y2 327 aaPredicted RBP26.79■■□□□ 1.88
LINC00543-201ENST00000567234 FAM200AQ8TCP9 573 aa26.79■■□□□ 1.88
LINC00543-201ENST00000567234 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.79■■□□□ 1.88
LINC00543-201ENST00000567234 NMT2O60551 498 aa26.78■■□□□ 1.88
LINC00543-201ENST00000567234 DPEP1P16444 411 aa26.78■■□□□ 1.88
LINC00543-201ENST00000567234 CMA1P23946 247 aa26.78■■□□□ 1.88
LINC00543-201ENST00000567234 KIF5BP33176 963 aa26.78■■□□□ 1.88
LINC00543-201ENST00000567234 PKN1Q16512 942 aa26.78■■□□□ 1.88
LINC00543-201ENST00000567234 AXDND1Q5T1B0 1012 aaPredicted RBP26.78■■□□□ 1.88
LINC00543-201ENST00000567234 BTBD18B2RXH4 712 aa26.77■■□□□ 1.88
LINC00543-201ENST00000567234 KCNA3P22001 575 aa26.77■■□□□ 1.88
LINC00543-201ENST00000567234 PTGER2P43116 358 aa26.77■■□□□ 1.88
LINC00543-201ENST00000567234 RILPL1Q5EBL4 403 aa26.77■■□□□ 1.88
LINC00543-201ENST00000567234 C16orf86Q6ZW13 317 aa26.77■■□□□ 1.88
LINC00543-201ENST00000567234 DYNLL2Q96FJ2 89 aa26.77■■□□□ 1.88
LINC00543-201ENST00000567234 FLT1P17948 1338 aa26.77■■□□□ 1.88
LINC00543-201ENST00000567234 PLEKHA8P1O95397 391 aa26.76■■□□□ 1.88
LINC00543-201ENST00000567234 ZSCAN20P17040 1043 aaPredicted RBP26.76■■□□□ 1.88
LINC00543-201ENST00000567234 PLCD1P51178 756 aa26.76■■□□□ 1.88
LINC00543-201ENST00000567234 KAT14Q9H8E8 782 aa26.76■■□□□ 1.88
LINC00543-201ENST00000567234 IL17RBQ9NRM6 502 aa26.76■■□□□ 1.88
LINC00543-201ENST00000567234 KCNJ14Q9UNX9 436 aa26.76■■□□□ 1.88
LINC00543-201ENST00000567234 DAGLAQ9Y4D2 1042 aa26.76■■□□□ 1.88
LINC00543-201ENST00000567234 TSPY3P0CV98 308 aa26.75■■□□□ 1.87
LINC00543-201ENST00000567234 TSPY8P0CW00 308 aa26.75■■□□□ 1.87
LINC00543-201ENST00000567234 CNKSR1Q969H4 720 aa26.75■■□□□ 1.87
LINC00543-201ENST00000567234 PPP1R1BQ9UD71 204 aaPredicted RBP26.75■■□□□ 1.87
LINC00543-201ENST00000567234 V9GY48 417 aaPredicted RBP26.75■■□□□ 1.87
LINC00543-201ENST00000567234 CNTNAP5Q8WYK1 1306 aa26.75■■□□□ 1.87
LINC00543-201ENST00000567234 RASA1P20936 1047 aa26.74■■□□□ 1.87
LINC00543-201ENST00000567234 NOLC1Q14978 699 aaKnown RBP eCLIP26.74■■□□□ 1.87
LINC00543-201ENST00000567234 TAF3Q5VWG9 929 aa26.74■■□□□ 1.87
LINC00543-201ENST00000567234 PODNQ7Z5L7 613 aa26.74■■□□□ 1.87
LINC00543-201ENST00000567234 PHF20Q9BVI0 1012 aa26.74■■□□□ 1.87
LINC00543-201ENST00000567234 SAP30BPQ9UHR5 308 aaKnown RBP26.74■■□□□ 1.87
LINC00543-201ENST00000567234 FAM237AA0A1B0GTK4 181 aa26.73■■□□□ 1.87
LINC00543-201ENST00000567234 A0A1B0GVL5 298 aa26.73■■□□□ 1.87
LINC00543-201ENST00000567234 GNAQP50148 359 aa26.73■■□□□ 1.87
LINC00543-201ENST00000567234 NDUFA8P51970 172 aa26.73■■□□□ 1.87
LINC00543-201ENST00000567234 SLC4A8Q2Y0W8 1093 aa26.73■■□□□ 1.87
LINC00543-201ENST00000567234 SRBD1Q8N5C6 995 aaKnown RBP26.73■■□□□ 1.87
LINC00543-201ENST00000567234 PNMA1Q8ND90 353 aa26.73■■□□□ 1.87
LINC00543-201ENST00000567234 MORC2Q9Y6X9 1032 aaPredicted RBP26.73■■□□□ 1.87
LINC00543-201ENST00000567234 G3V3G9 751 aa26.72■■□□□ 1.87
LINC00543-201ENST00000567234 CUTAO60888 179 aa26.72■■□□□ 1.87
LINC00543-201ENST00000567234 CDK8P49336 464 aa26.72■■□□□ 1.87
LINC00543-201ENST00000567234 FKBP1AP62942 108 aaKnown RBP26.72■■□□□ 1.87
LINC00543-201ENST00000567234 DCAF8Q5TAQ9 597 aa26.72■■□□□ 1.87
LINC00543-201ENST00000567234 CERS5Q8N5B7 392 aa26.72■■□□□ 1.87
LINC00543-201ENST00000567234 C7orf43Q8WVR3 580 aa26.72■■□□□ 1.87
LINC00543-201ENST00000567234 WDHD1O75717 1129 aaPredicted RBP26.72■■□□□ 1.87
LINC00543-201ENST00000567234 ANO6Q4KMQ2 910 aa26.72■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms