RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 EPN1Q9Y6I3 576 aaPredicted RBP28.22■■■□□ 2.11
FANCA-221ENST00000566889 ZBTB43O43298 467 aa28.22■■■□□ 2.11
FANCA-221ENST00000566889 GRIN1Q05586 938 aa28.22■■■□□ 2.11
FANCA-221ENST00000566889 SPAG1Q07617 926 aa28.22■■■□□ 2.11
FANCA-221ENST00000566889 FBXW10Q5XX13 1052 aa28.22■■■□□ 2.11
FANCA-221ENST00000566889 ZNF662Q6ZS27 426 aa28.22■■■□□ 2.11
FANCA-221ENST00000566889 FAM184BQ9ULE4 1060 aa28.22■■■□□ 2.11
FANCA-221ENST00000566889 GUCA1BQ9UMX6 200 aa28.22■■■□□ 2.11
FANCA-221ENST00000566889 DDR1Q08345 913 aa28.21■■■□□ 2.11
FANCA-221ENST00000566889 SSRP1Q08945 709 aaKnown RBP28.21■■■□□ 2.11
FANCA-221ENST00000566889 KLHL10Q6JEL2 608 aa28.21■■■□□ 2.11
FANCA-221ENST00000566889 KCNH5Q8NCM2 988 aa28.21■■■□□ 2.11
FANCA-221ENST00000566889 GSDMAQ96QA5 445 aa28.21■■■□□ 2.11
FANCA-221ENST00000566889 FOXP1Q9H334 677 aaPredicted RBP28.21■■■□□ 2.11
FANCA-221ENST00000566889 SEC31BQ9NQW1 1179 aa28.21■■■□□ 2.11
FANCA-221ENST00000566889 GRIN2DO15399 1336 aa28.21■■■□□ 2.11
FANCA-221ENST00000566889 NDUFA10O95299 355 aa28.2■■■□□ 2.11
FANCA-221ENST00000566889 CD44P16070 742 aaKnown RBP28.2■■■□□ 2.11
FANCA-221ENST00000566889 FOXO4P98177 505 aa28.2■■■□□ 2.11
FANCA-221ENST00000566889 CCDC70Q6NSX1 233 aa28.2■■■□□ 2.11
FANCA-221ENST00000566889 LRP10Q7Z4F1 713 aa28.2■■■□□ 2.11
FANCA-221ENST00000566889 STAG1Q8WVM7 1258 aa28.2■■■□□ 2.11
FANCA-221ENST00000566889 SH3GL2Q99962 352 aa28.2■■■□□ 2.11
FANCA-221ENST00000566889 MMP1P03956 469 aa28.2■■■□□ 2.1
FANCA-221ENST00000566889 PIP4K2AP48426 406 aaPredicted RBP28.2■■■□□ 2.1
FANCA-221ENST00000566889 STX17P56962 302 aa28.2■■■□□ 2.1
FANCA-221ENST00000566889 CABS1Q96KC9 395 aa28.2■■■□□ 2.1
FANCA-221ENST00000566889 RNF216Q9NWF9 866 aaPredicted RBP28.2■■■□□ 2.1
FANCA-221ENST00000566889 N4BP3O15049 544 aa28.19■■■□□ 2.1
FANCA-221ENST00000566889 OPA1O60313 960 aa28.19■■■□□ 2.1
FANCA-221ENST00000566889 RANBP6O60518 1105 aaKnown RBP28.19■■■□□ 2.1
FANCA-221ENST00000566889 GNGT1P63211 74 aa28.19■■■□□ 2.1
FANCA-221ENST00000566889 FKBP4Q02790 459 aaKnown RBP eCLIP28.19■■■□□ 2.1
FANCA-221ENST00000566889 AMOTL1Q8IY63 956 aa28.19■■■□□ 2.1
FANCA-221ENST00000566889 TBC1D2BQ9UPU7 963 aa28.19■■■□□ 2.1
FANCA-221ENST00000566889 TBX22Q9Y458 520 aa28.19■■■□□ 2.1
FANCA-221ENST00000566889 GOLGA8AA7E2F4 631 aa28.19■■■□□ 2.1
FANCA-221ENST00000566889 AENQ8WTP8 325 aaKnown RBP28.19■■■□□ 2.1
FANCA-221ENST00000566889 PPP1R3GB7ZBB8 358 aa28.18■■■□□ 2.1
FANCA-221ENST00000566889 EYA2O00167 538 aa28.18■■■□□ 2.1
FANCA-221ENST00000566889 CIAO1O76071 339 aa28.18■■■□□ 2.1
FANCA-221ENST00000566889 FMNL1O95466 1100 aaPredicted RBP28.18■■■□□ 2.1
FANCA-221ENST00000566889 APPP05067 770 aa28.18■■■□□ 2.1
FANCA-221ENST00000566889 KRT9P35527 623 aa28.18■■■□□ 2.1
FANCA-221ENST00000566889 SKOR1P84550 965 aa28.18■■■□□ 2.1
FANCA-221ENST00000566889 SH3RF1Q7Z6J0 888 aa28.18■■■□□ 2.1
FANCA-221ENST00000566889 MICU3Q86XE3 530 aa28.18■■■□□ 2.1
FANCA-221ENST00000566889 MYH8P13535 1937 aa28.18■■■□□ 2.1
FANCA-221ENST00000566889 BTBD18B2RXH4 712 aa28.18■■■□□ 2.1
FANCA-221ENST00000566889 ATP1A1P05023 1023 aaKnown RBP28.18■■■□□ 2.1
FANCA-221ENST00000566889 EPB41P11171 864 aaKnown RBP28.18■■■□□ 2.1
FANCA-221ENST00000566889 KRT31Q15323 416 aa28.18■■■□□ 2.1
FANCA-221ENST00000566889 SGMS1Q86VZ5 419 aa28.18■■■□□ 2.1
FANCA-221ENST00000566889 DIS3L2Q8IYB7 885 aaKnown RBP28.18■■■□□ 2.1
FANCA-221ENST00000566889 REXO2Q9Y3B8 237 aaKnown RBP28.18■■■□□ 2.1
FANCA-221ENST00000566889 FSBPO95073 299 aa28.17■■■□□ 2.1
FANCA-221ENST00000566889 CYB5R4Q7L1T6 521 aa28.17■■■□□ 2.1
FANCA-221ENST00000566889 MYO5AQ9Y4I1 1855 aaKnown RBP28.16■■■□□ 2.1
FANCA-221ENST00000566889 BCL9LQ86UU0 1499 aa28.16■■■□□ 2.1
FANCA-221ENST00000566889 RXRAP19793 462 aa28.16■■■□□ 2.1
FANCA-221ENST00000566889 AATFQ9NY61 560 aaKnown RBP eCLIP28.16■■■□□ 2.11e-6■□□□□ 8.1
FANCA-221ENST00000566889 HDAC6Q9UBN7 1215 aa28.16■■■□□ 2.1
FANCA-221ENST00000566889 IQSEC3Q9UPP2 1182 aaPredicted RBP28.16■■■□□ 2.1
FANCA-221ENST00000566889 ABCC12Q96J65 1359 aa28.16■■■□□ 2.1
FANCA-221ENST00000566889 GPAA1O43292 621 aa28.16■■■□□ 2.1
FANCA-221ENST00000566889 KIAA0754O94854 1291 aa28.16■■■□□ 2.1
FANCA-221ENST00000566889 SLC26A6Q9BXS9 759 aa28.16■■■□□ 2.1
FANCA-221ENST00000566889 FAM217BQ9NTX9 383 aaPredicted RBP28.16■■■□□ 2.1
FANCA-221ENST00000566889 ARFGEF2Q9Y6D5 1785 aa28.16■■■□□ 2.1
FANCA-221ENST00000566889 ANO9A1A5B4 782 aa28.15■■■□□ 2.1
FANCA-221ENST00000566889 H7C1W4 665 aa28.15■■■□□ 2.1
FANCA-221ENST00000566889 ENC1O14682 589 aa28.15■■■□□ 2.1
FANCA-221ENST00000566889 CCT6AP40227 531 aaKnown RBP28.15■■■□□ 2.1
FANCA-221ENST00000566889 ZNF622Q969S3 477 aaKnown RBP eCLIP28.15■■■□□ 2.1
FANCA-221ENST00000566889 JAKMIP2Q96AA8 810 aa28.15■■■□□ 2.1
FANCA-221ENST00000566889 PUS7LQ9H0K6 701 aaKnown RBP28.15■■■□□ 2.1
FANCA-221ENST00000566889 CSRNP2Q9H175 543 aa28.15■■■□□ 2.1
FANCA-221ENST00000566889 STRN4Q9NRL3 753 aa28.15■■■□□ 2.1
FANCA-221ENST00000566889 PARP4Q9UKK3 1724 aaKnown RBP28.15■■■□□ 2.1
FANCA-221ENST00000566889 ATP5J2-PTCD1G3V325 749 aa28.15■■■□□ 2.1
FANCA-221ENST00000566889 PTCD1O75127 700 aaKnown RBP28.15■■■□□ 2.1
FANCA-221ENST00000566889 COPB1P53618 953 aaKnown RBP28.15■■■□□ 2.1
FANCA-221ENST00000566889 XAGE2Q96GT9 111 aa28.15■■■□□ 2.1
FANCA-221ENST00000566889 PAGE5Q96GU1 130 aa28.15■■■□□ 2.1
FANCA-221ENST00000566889 TAOK2Q9UL54 1235 aa28.15■■■□□ 2.1
FANCA-221ENST00000566889 EID1Q9Y6B2 187 aa28.15■■■□□ 2.1
FANCA-221ENST00000566889 CAPN7Q9Y6W3 813 aa28.15■■■□□ 2.1
FANCA-221ENST00000566889 MYBL2P10244 700 aa28.14■■■□□ 2.1
FANCA-221ENST00000566889 FNTAP49354 379 aa28.14■■■□□ 2.1
FANCA-221ENST00000566889 KRT83P78385 493 aa28.14■■■□□ 2.1
FANCA-221ENST00000566889 NFXL1Q6ZNB6 911 aa28.14■■■□□ 2.1
FANCA-221ENST00000566889 GDAP1L1Q96MZ0 367 aa28.14■■■□□ 2.1
FANCA-221ENST00000566889 SUFUQ9UMX1 484 aa28.14■■■□□ 2.1
FANCA-221ENST00000566889 SETD1BQ9UPS6 1966 aaKnown RBP28.14■■■□□ 2.1
FANCA-221ENST00000566889 IFNAR1P17181 557 aa28.14■■■□□ 2.09
FANCA-221ENST00000566889 DPYDQ12882 1025 aa28.14■■■□□ 2.09
FANCA-221ENST00000566889 CCDC122Q5T0U0 273 aa28.14■■■□□ 2.09
FANCA-221ENST00000566889 ANKRD18AQ8IVF6 992 aa28.14■■■□□ 2.09
FANCA-221ENST00000566889 CAGE1Q8TC20 777 aa28.14■■■□□ 2.09
FANCA-221ENST00000566889 IGDCC4Q8TDY8 1250 aa28.14■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms