RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 GPLD1P80108 840 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 CLCQ05315 142 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 PABPC4Q13310 644 aaKnown RBP eCLIP4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 TMEM67Q5HYA8 995 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 MRM1Q6IN84 353 aaKnown RBP4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 AGMOQ6ZNB7 445 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 NLRP13Q86W25 1043 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 ZDHHC13Q8IUH4 622 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 FAM178BQ8IXR5 827 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 CHPFQ8IZ52 775 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 NINJ1Q92982 152 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 PMEPA1Q969W9 287 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 RELTQ969Z4 430 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 IL17RAQ96F46 866 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 ARPC5LQ9BPX5 153 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 DBNDD2Q9BQY9 259 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 ARNT2Q9HBZ2 717 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 CHST12Q9NRB3 414 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 GNL3LQ9NVN8 582 aaKnown RBP4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 ZIM2Q9NZV7 527 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 ZNRF3Q9ULT6 936 aa4.31□□□□□ -1.72
HERPUD1-211ENST00000566550 WASHC2CQ9Y4E1 1318 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 A0A087X0B3 334 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 FAM86C2PA6NEL3 165 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 METTL12A8MUP2 240 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 ENC1O14682 589 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 GRIN3BO60391 1043 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 TRPA1O75762 1119 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 GHRHP01286 108 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 RARAP10276 462 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 ACPPP15309 386 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 NRLP54845 237 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 MLLT1Q03111 559 aaPredicted RBP4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 MCL1Q07820 350 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 LMOD3Q0VAK6 560 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 DHX8Q14562 1220 aaKnown RBP4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 UVSSAQ2YD98 709 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 RNF43Q68DV7 783 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 Q6ZS46 218 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 TRIM42Q8IWZ5 723 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 GIMAP7Q8NHV1 300 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 APBA2Q99767 749 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 TMX4Q9H1E5 349 aaPredicted RBP4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 AASDHPPTQ9NRN7 309 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 ADGRE2Q9UHX3 823 aa4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 ANGEL1Q9UNK9 670 aaKnown RBP4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 LAS1LQ9Y4W2 734 aaKnown RBP4.3□□□□□ -1.72
HERPUD1-211ENST00000566550 ZBTB42B2RXF5 422 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 SASH3O75995 380 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 RAPGEF3O95398 923 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 GRNP28799 593 aaKnown RBP4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 PMLP29590 882 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 L1CAMP32004 1257 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 GRIA4P48058 902 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 NEK2P51955 445 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 ITKQ08881 620 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 FOXD4Q12950 439 aaPredicted RBP4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 STRN3Q13033 797 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 MPP2Q14168 576 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 ZRSR2Q15696 482 aaKnown RBP4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 SPRED3Q2MJR0 410 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 C10orf62Q5T681 223 aaPredicted RBP4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 DIEXFQ68CQ4 756 aaKnown RBP4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 GDF6Q6KF10 455 aaPredicted RBP4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 EEPD1Q7L9B9 569 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 REC114Q7Z4M0 266 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 RNF180Q86T96 592 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 TTC6Q86TZ1 520 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 NCAPG2Q86XI2 1143 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 IL22RA1Q8N6P7 574 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 ST13P5Q8NFI4 369 aaPredicted RBP4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 ASAP3Q8TDY4 903 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 GATAD2BQ8WXI9 593 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 UTP4Q969X6 686 aaKnown RBP4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 NECAB3Q96P71 396 aaPredicted RBP4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 TCF12Q99081 682 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 OSMRQ99650 979 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 ZKSCAN3Q9BRR0 538 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 TARS2Q9BW92 718 aaKnown RBP4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 SPATA9Q9BWV2 254 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 LRRC3Q9BY71 257 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 ASPSCR1Q9BZE9 553 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 DZANK1Q9NVP4 752 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 PCDHB14Q9Y5E9 798 aa4.29□□□□□ -1.72
HERPUD1-211ENST00000566550 ROBO2Q9HCK4 1378 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 NPHP1O15259 732 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 AKAP10O43572 662 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 IMPDH2P12268 514 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 CDC27P30260 824 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 WDR78Q5VTH9 848 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 OGFOD2Q6N063 350 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 ZBTB46Q86UZ6 589 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 CLEC10AQ8IUN9 316 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 SAMD3Q8N6K7 520 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 POU5F2Q8N7G0 328 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 JMYQ8N9B5 988 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 RIN3Q8TB24 985 aa4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 PNISRQ8TF01 805 aaKnown RBP4.28□□□□□ -1.72
HERPUD1-211ENST00000566550 LEO1Q8WVC0 666 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms