RNA–Protein interactions for RNA: ENST00000566307.1

LSM3P5-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 5, humanhuman

BASIC

Gene LSM3P5, Length 306 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P5-201ENST00000566307 AOC3Q16853 763 aa10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 CDC42EP5Q6NZY7 148 aa10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 ZNF444Q8N0Y2 327 aaPredicted RBP10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 CRACR2BQ8N4Y2 399 aaPredicted RBP10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 GPT2Q8TD30 523 aa10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 GMLQ99445 158 aa10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 OSBPL5Q9H0X9 879 aaPredicted RBP10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 MKNK2Q9HBH9 465 aa10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 MORC2Q9Y6X9 1032 aaPredicted RBP10.3□□□□□ -0.76
LSM3P5-201ENST00000566307 ATRNL1Q5VV63 1379 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 GREB1LQ9C091 1923 aaPredicted RBP10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 YDJCA8MPS7 323 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 ENTPD3O75355 529 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 PRDM1O75626 825 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 U2AF2P26368 475 aaKnown RBP eCLIP10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 SMARCA1P28370 1054 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 KIF5BP33176 963 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 TFAP4Q01664 338 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 KIF23Q02241 960 aaPredicted RBP10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 DALRD3Q5D0E6 543 aaKnown RBP10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 RSBN1LQ6PCB5 846 aaPredicted RBP10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 TMTC3Q6ZXV5 915 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 METTL16Q86W50 562 aaKnown RBP10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 MTMR14Q8NCE2 650 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 AGBL3Q8NEM8 1001 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 LZTS2Q9BRK4 669 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 ZKSCAN3Q9BRR0 538 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 ALG1Q9BT22 464 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 IL17RBQ9NRM6 502 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 USP40Q9NVE5 1235 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 RCOR1Q9UKL0 485 aa10.29□□□□□ -0.76
LSM3P5-201ENST00000566307 IGKV6D-41A0A0C4DH26 115 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 LETM1O95202 739 aaPredicted RBP10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 YEATS4O95619 227 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 HLA-DOAP06340 250 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 TSPY3P0CV98 308 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 TSPY8P0CW00 308 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 TRIM29Q14134 588 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 GRM4Q14833 912 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 L1TD1Q5T7N2 865 aaKnown RBP10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 FKBP1CQ5VVH2 108 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 KRT40Q6A162 431 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 ILDR1Q86SU0 546 aaPredicted RBP10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 FERMT3Q86UX7 667 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 CTCFLQ8NI51 663 aaPredicted RBP10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 LEO1Q8WVC0 666 aaPredicted RBP10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 UPF1Q92900 1129 aaKnown RBP eCLIP10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 FBXW7Q969H0 707 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 DYNLL2Q96FJ2 89 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 CCDC17Q96LX7 622 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 MYL10Q9BUA6 226 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 DDX4Q9NQI0 724 aaKnown RBP10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 POLR3EQ9NVU0 708 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 RTEL1Q9NZ71 1219 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 SERPINB13Q9UIV8 391 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 ZNRF3Q9ULT6 936 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 ARFGEF1Q9Y6D6 1849 aa10.28□□□□□ -0.76
LSM3P5-201ENST00000566307 FIBPO43427 364 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 ZBTB7AO95365 584 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 TOP1P11387 765 aaKnown RBP10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 XBP1P17861 261 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 NASPP49321 788 aaPredicted RBP10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 SCNN1DP51172 638 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 FAM47AQ5JRC9 791 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 MYSM1Q5VVJ2 828 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 FOXP4Q8IVH2 680 aaPredicted RBP10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 NIM1KQ8IY84 436 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 LARGE2Q8N3Y3 721 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 CHAMP1Q96JM3 812 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 SPATA32Q96LK8 384 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 SLC26A6Q9BXS9 759 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 FOXP1Q9H334 677 aaPredicted RBP10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 KAT14Q9H8E8 782 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 KCNQ5Q9NR82 932 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 HDAC9Q9UKV0 1011 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 CNTNAP5Q8WYK1 1306 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 MYH6P13533 1939 aa10.27□□□□□ -0.77
LSM3P5-201ENST00000566307 ADAMTSL1Q8N6G6 1762 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 SIPA1L1O43166 1804 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 COL4A5P29400 1685 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 F8W031 263 aaPredicted RBP10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 GADD45BO75293 160 aaPredicted RBP10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 MMP1P03956 469 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 RXRAP19793 462 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 DEKP35659 375 aaKnown RBP10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 PTGER2P43116 358 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 AKAP17AQ02040 695 aaKnown RBP10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 PKN1Q16512 942 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 RAB11FIP4Q86YS3 637 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 KIAA0825Q8IV33 1275 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 PNMA1Q8ND90 353 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 NUP133Q8WUM0 1156 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 PHKBQ93100 1093 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 ZBED3Q96IU2 234 aaPredicted RBP10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 MXD3Q9BW11 206 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 TAOK3Q9H2K8 898 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 SH3GLB2Q9NR46 395 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 TMEM63CQ9P1W3 806 aa10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 SAP30BPQ9UHR5 308 aaKnown RBP10.26□□□□□ -0.77
LSM3P5-201ENST00000566307 SYNPO2Q9UMS6 1093 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms