RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 FAM153BP0C7A2 387 aa7.18□□□□□ -1.26
CNOT1-209ENST00000566240 TTLL4Q14679 1199 aa7.18□□□□□ -1.26
CNOT1-209ENST00000566240 NKG7Q16617 165 aa7.18□□□□□ -1.26
CNOT1-209ENST00000566240 SLC10A6Q3KNW5 377 aa7.18□□□□□ -1.26
CNOT1-209ENST00000566240 TKFCQ3LXA3 575 aa7.18□□□□□ -1.26
CNOT1-209ENST00000566240 BBS9Q3SYG4 887 aa7.18□□□□□ -1.26
CNOT1-209ENST00000566240 KIAA1211Q6ZU35 1233 aa7.18□□□□□ -1.26
CNOT1-209ENST00000566240 KCT2Q8NC54 265 aa7.18□□□□□ -1.26
CNOT1-209ENST00000566240 SMG8Q8ND04 991 aaKnown RBP7.18□□□□□ -1.26
CNOT1-209ENST00000566240 CCDC74BQ96LY2 380 aa7.18□□□□□ -1.26
CNOT1-209ENST00000566240 RNF208Q9H0X6 261 aa7.18□□□□□ -1.26
CNOT1-209ENST00000566240 SUGCTQ9HAC7 445 aa7.18□□□□□ -1.26
CNOT1-209ENST00000566240 RRAGCQ9HB90 399 aa7.18□□□□□ -1.26
CNOT1-209ENST00000566240 AP4E1Q9UPM8 1137 aa7.18□□□□□ -1.26
CNOT1-209ENST00000566240 COL4A3BPQ9Y5P4 624 aa7.18□□□□□ -1.26
CNOT1-209ENST00000566240 IQCA1LA6NCM1 817 aa7.17□□□□□ -1.26
CNOT1-209ENST00000566240 ADH5P11766 374 aa7.17□□□□□ -1.26
CNOT1-209ENST00000566240 GBP1P32455 592 aa7.17□□□□□ -1.26
CNOT1-209ENST00000566240 PMS1P54277 932 aaKnown RBP7.17□□□□□ -1.26
CNOT1-209ENST00000566240 SNRPNP63162 240 aaKnown RBP7.17□□□□□ -1.26
CNOT1-209ENST00000566240 SOX4Q06945 474 aaPredicted RBP7.17□□□□□ -1.26
CNOT1-209ENST00000566240 TCEA2Q15560 299 aa7.17□□□□□ -1.26
CNOT1-209ENST00000566240 LONRF2Q1L5Z9 754 aa7.17□□□□□ -1.26
CNOT1-209ENST00000566240 TAF7LQ5H9L4 462 aa7.17□□□□□ -1.26
CNOT1-209ENST00000566240 ACAD11Q709F0 780 aa7.17□□□□□ -1.26
CNOT1-209ENST00000566240 TMEM192Q8IY95 271 aa7.17□□□□□ -1.26
CNOT1-209ENST00000566240 LRRC47Q8N1G4 583 aaKnown RBP7.17□□□□□ -1.26
CNOT1-209ENST00000566240 SYNPOQ8N3V7 929 aa7.17□□□□□ -1.26
CNOT1-209ENST00000566240 ZSWIM2Q8NEG5 633 aa7.17□□□□□ -1.26
CNOT1-209ENST00000566240 SLC6A18Q96N87 628 aa7.17□□□□□ -1.26
CNOT1-209ENST00000566240 CWC22Q9HCG8 908 aaKnown RBP7.17□□□□□ -1.26
CNOT1-209ENST00000566240 PCDH12Q9NPG4 1184 aa7.17□□□□□ -1.26
CNOT1-209ENST00000566240 UBOX5O94941 541 aa7.16□□□□□ -1.26
CNOT1-209ENST00000566240 ASMTLO95671 621 aa7.16□□□□□ -1.26
CNOT1-209ENST00000566240 NEFMP07197 916 aa7.16□□□□□ -1.26
CNOT1-209ENST00000566240 HCLS1P14317 486 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-209ENST00000566240 DRD2P14416 443 aa7.16□□□□□ -1.26
CNOT1-209ENST00000566240 CAP2P40123 477 aa7.16□□□□□ -1.26
CNOT1-209ENST00000566240 ANAPC15P60006 121 aa7.16□□□□□ -1.26
CNOT1-209ENST00000566240 SLBPQ14493 270 aaKnown RBP eCLIP7.16□□□□□ -1.26
CNOT1-209ENST00000566240 DYMQ7RTS9 669 aa7.16□□□□□ -1.26
CNOT1-209ENST00000566240 C12orf50Q8NA57 414 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-209ENST00000566240 ZBTB38Q8NAP3 1195 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-209ENST00000566240 TRIM11Q96F44 468 aa7.16□□□□□ -1.26
CNOT1-209ENST00000566240 DPH2Q9BQC3 489 aaPredicted RBP7.16□□□□□ -1.26
CNOT1-209ENST00000566240 SUCOQ9UBS9 1254 aaKnown RBP7.16□□□□□ -1.26
CNOT1-209ENST00000566240 ADCY3O60266 1144 aa7.15□□□□□ -1.26
CNOT1-209ENST00000566240 RNGTTO60942 597 aaKnown RBP7.15□□□□□ -1.26
CNOT1-209ENST00000566240 CST3P01034 146 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-209ENST00000566240 TP53P04637 393 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-209ENST00000566240 TMEM67Q5HYA8 995 aa7.15□□□□□ -1.26
CNOT1-209ENST00000566240 IGF2-ASQ6U949 168 aa7.15□□□□□ -1.26
CNOT1-209ENST00000566240 UBE3DQ7Z6J8 389 aa7.15□□□□□ -1.26
CNOT1-209ENST00000566240 PPFIBP1Q86W92 1011 aa7.15□□□□□ -1.26
CNOT1-209ENST00000566240 BAHD1Q8TBE0 780 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-209ENST00000566240 CYB5D2Q8WUJ1 264 aa7.15□□□□□ -1.26
CNOT1-209ENST00000566240 ISL2Q96A47 359 aa7.15□□□□□ -1.26
CNOT1-209ENST00000566240 SGSM3Q96HU1 749 aa7.15□□□□□ -1.26
CNOT1-209ENST00000566240 SLC26A8Q96RN1 970 aa7.15□□□□□ -1.26
CNOT1-209ENST00000566240 PLVAPQ9BX97 442 aa7.15□□□□□ -1.26
CNOT1-209ENST00000566240 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.15□□□□□ -1.26
CNOT1-209ENST00000566240 GSX1Q9H4S2 264 aaPredicted RBP7.15□□□□□ -1.26
CNOT1-209ENST00000566240 PIDD1Q9HB75 910 aa7.15□□□□□ -1.26
CNOT1-209ENST00000566240 SSU72Q9NP77 194 aaKnown RBP7.15□□□□□ -1.26
CNOT1-209ENST00000566240 FAM86C1Q9NVL1 165 aa7.15□□□□□ -1.26
CNOT1-209ENST00000566240 KRBA1A5PL33 1030 aa7.14□□□□□ -1.27
CNOT1-209ENST00000566240 ANKRD34BA5PLL1 514 aa7.14□□□□□ -1.27
CNOT1-209ENST00000566240 AGRPO00253 132 aa7.14□□□□□ -1.27
CNOT1-209ENST00000566240 CLEC3AO75596 197 aa7.14□□□□□ -1.27
CNOT1-209ENST00000566240 TIAF1O95411 115 aa7.14□□□□□ -1.27
CNOT1-209ENST00000566240 ASPAP45381 313 aa7.14□□□□□ -1.27
CNOT1-209ENST00000566240 MASP1P48740 699 aa7.14□□□□□ -1.27
CNOT1-209ENST00000566240 ZNF143P52747 638 aaPredicted RBP7.14□□□□□ -1.27
CNOT1-209ENST00000566240 TRIM28Q13263 835 aaKnown RBP7.14□□□□□ -1.27
CNOT1-209ENST00000566240 SV2CQ496J9 727 aa7.14□□□□□ -1.27
CNOT1-209ENST00000566240 ZC3H12BQ5HYM0 836 aaKnown RBP7.14□□□□□ -1.27
CNOT1-209ENST00000566240 PRAMEF13Q5VWM6 474 aa7.14□□□□□ -1.27
CNOT1-209ENST00000566240 TDRD10Q5VZ19 366 aaKnown RBP7.14□□□□□ -1.27
CNOT1-209ENST00000566240 APBA2Q99767 749 aa7.14□□□□□ -1.27
CNOT1-209ENST00000566240 MRPL18Q9H0U6 180 aaKnown RBP7.14□□□□□ -1.27
CNOT1-209ENST00000566240 CD2APQ9Y5K6 639 aa7.14□□□□□ -1.27
CNOT1-209ENST00000566240 SPDYE3A6NKU9 549 aa7.13□□□□□ -1.27
CNOT1-209ENST00000566240 C9IYK1 514 aa7.13□□□□□ -1.27
CNOT1-209ENST00000566240 NAT2P11245 290 aa7.13□□□□□ -1.27
CNOT1-209ENST00000566240 DALRD3Q5D0E6 543 aaKnown RBP7.13□□□□□ -1.27
CNOT1-209ENST00000566240 HEATR6Q6AI08 1181 aaKnown RBP7.13□□□□□ -1.27
CNOT1-209ENST00000566240 FDX2Q6P4F2 183 aa7.13□□□□□ -1.27
CNOT1-209ENST00000566240 LINC00114Q6XXX2 140 aa7.13□□□□□ -1.27
CNOT1-209ENST00000566240 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.13□□□□□ -1.27
CNOT1-209ENST00000566240 SMYD4Q8IYR2 804 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-209ENST00000566240 SMARCC1Q92922 1105 aaPredicted RBP7.13□□□□□ -1.27
CNOT1-209ENST00000566240 HAUS7Q99871 368 aa7.13□□□□□ -1.27
CNOT1-209ENST00000566240 FAM105AQ9NUU6 356 aa7.13□□□□□ -1.27
CNOT1-209ENST00000566240 SUSD2Q9UGT4 822 aa7.13□□□□□ -1.27
CNOT1-209ENST00000566240 ACTL7BQ9Y614 415 aa7.13□□□□□ -1.27
CNOT1-209ENST00000566240 CCDC163A0A0D9SF12 145 aa7.12□□□□□ -1.27
CNOT1-209ENST00000566240 A0A1W2PQU0 124 aa7.12□□□□□ -1.27
CNOT1-209ENST00000566240 RAB11FIP3O75154 756 aa7.12□□□□□ -1.27
CNOT1-209ENST00000566240 EPHX1P07099 455 aa7.12□□□□□ -1.27
CNOT1-209ENST00000566240 ELNP15502 786 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms