RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 ZNF232Q9UNY5 417 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 HPSEQ9Y251 543 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 RBM8AQ9Y5S9 174 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 PPRC1Q5VV67 1664 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 IL13P35225 146 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 STK38Q15208 465 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 CCDC114Q96M63 670 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 PANX2Q96RD6 677 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 RAB11FIP3O75154 756 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 RANBP1P43487 201 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 KCNB1Q14721 858 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 MTF1Q14872 753 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 HHATQ5VTY9 493 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 APTXQ7Z2E3 356 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 ARMC9Q7Z3E5 817 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 KIAA1328Q86T90 577 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 FAM114A1Q8IWE2 563 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 ZNF280CQ8ND82 737 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 RUFY2Q8WXA3 655 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 RIN2Q8WYP3 895 aaPredicted RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 ZSWIM4Q9H7M6 989 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 ZNHIT6Q9NWK9 470 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 KIAA1468Q9P260 1216 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 F6X3S4 739 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 SLC27A2O14975 620 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 MTX1Q13505 466 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 DBN1Q16643 649 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 TBC1D10BQ4KMP7 808 aaPredicted RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 GKAP1Q5VSY0 366 aaPredicted RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 PAPD7Q5XG87 772 aaKnown RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 GPIHBP1Q8IV16 184 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 C3orf20Q8ND61 904 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 L3MBTL3Q96JM7 780 aaPredicted RBP3.26□□□□□ -1.89
CHD9-218ENST00000566029 DNAJC5BQ9UF47 199 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 CRB1P82279 1406 aa3.26□□□□□ -1.89
CHD9-218ENST00000566029 ZEB2O60315 1214 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 CMA1P23946 247 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 ANKRD1Q15327 319 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 PABPC1LQ4VXU2 614 aaKnown RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 NLRP14Q86W24 1093 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 CD302Q8IX05 232 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 SLC35F6Q8N357 371 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 MYCBPAPQ8TBZ2 947 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 ZNF473Q8WTR7 871 aaKnown RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 KCNMB3Q9NPA1 279 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 GABBR1Q9UBS5 961 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 WDR17Q8IZU2 1322 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 RNF8O76064 485 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 FESP07332 822 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 LINGO3P0C6S8 592 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 NNTQ13423 1086 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 SH2D4BQ5SQS7 431 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 CCDC13Q8IYE1 715 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 ACRBPQ8NEB7 543 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 REXO2Q9Y3B8 237 aaKnown RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 EMILIN1Q9Y6C2 1016 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 A0A0U1RQJ8 604 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 PTPDC1A2A3K4 754 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 BHMG1C9JSJ3 638 aaPredicted RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 SMNDC1O75940 238 aaKnown RBP eCLIP3.25□□□□□ -1.89
CHD9-218ENST00000566029 NPTXRO95502 500 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 DRD4P21917 467 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 SLC8A1P32418 973 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 GGCXP38435 758 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 NEXNQ0ZGT2 675 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 KLHL10Q6JEL2 608 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 SDCCAG8Q86SQ7 713 aaPredicted RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 TRIM74Q86UV6 250 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 TRIM73Q86UV7 250 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 BCAS4Q8TDM0 211 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 MAP4K1Q92918 833 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 HINFPQ9BQA5 517 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 CAMSAP1Q5T5Y3 1602 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 ATP6V1G2O95670 118 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 LMOD1P29536 600 aaPredicted RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 ELF3P78545 371 aaPredicted RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 AKAP17AQ02040 695 aaKnown RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 EBF2Q9HAK2 575 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 LUC7LQ9NQ29 371 aaKnown RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 RGL1Q9NZL6 768 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 CAND2O75155 1236 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 SKAP2O75563 359 aaPredicted RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 RTN3O95197 1032 aaPredicted RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 ANKRD20A8PQ5CZ79 823 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 ENOX1Q8TC92 643 aaKnown RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 OPA1O60313 960 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 HSPA9P38646 679 aaKnown RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 ARHGEF6Q15052 776 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 ATL2Q8NHH9 583 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 MOV10L1Q9BXT6 1211 aaKnown RBP3.25□□□□□ -1.89
CHD9-218ENST00000566029 NOD2Q9HC29 1040 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 PPP1R37O75864 691 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 NAA35Q5VZE5 725 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 CYB5D1Q6P9G0 228 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 PPFIBP1Q86W92 1011 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 ZNF354CQ86Y25 554 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 MREGQ8N565 214 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 CCHCR1Q8TD31 782 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 ZFAND2BQ8WV99 257 aa3.25□□□□□ -1.89
CHD9-218ENST00000566029 CDC5LQ99459 802 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms