RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 C12orf60Q5U649 245 aa20.07■□□□□ 0.8
USB1-211ENST00000565662 TRMT44Q8IYL2 757 aaKnown RBP20.07■□□□□ 0.8
USB1-211ENST00000565662 LPAR1Q92633 364 aa20.07■□□□□ 0.8
USB1-211ENST00000565662 CRBNQ96SW2 442 aa20.07■□□□□ 0.8
USB1-211ENST00000565662 NACAP1Q9BZK3 213 aa20.07■□□□□ 0.8
USB1-211ENST00000565662 MPHOSPH10O00566 681 aaKnown RBP20.06■□□□□ 0.8
USB1-211ENST00000565662 MAPK4P31152 587 aa20.06■□□□□ 0.8
USB1-211ENST00000565662 PRKCZQ05513 592 aa20.06■□□□□ 0.8
USB1-211ENST00000565662 SBK1Q52WX2 424 aa20.06■□□□□ 0.8
USB1-211ENST00000565662 C16orf86Q6ZW13 317 aa20.06■□□□□ 0.8
USB1-211ENST00000565662 CCAR1Q8IX12 1150 aaKnown RBP20.06■□□□□ 0.8
USB1-211ENST00000565662 GPRC5AQ8NFJ5 357 aa20.06■□□□□ 0.8
USB1-211ENST00000565662 RWDD1Q9H446 243 aaPredicted RBP20.06■□□□□ 0.8
USB1-211ENST00000565662 CAP1Q01518 475 aa20.05■□□□□ 0.8
USB1-211ENST00000565662 LBX2Q6XYB7 198 aa20.05■□□□□ 0.8
USB1-211ENST00000565662 ROBO3Q96MS0 1386 aa20.05■□□□□ 0.8
USB1-211ENST00000565662 STRBPQ96SI9 672 aaKnown RBP20.04■□□□□ 0.8
USB1-211ENST00000565662 FSD1Q9BTV5 496 aa20.04■□□□□ 0.8
USB1-211ENST00000565662 PUS7LQ9H0K6 701 aaKnown RBP20.04■□□□□ 0.8
USB1-211ENST00000565662 BIN2Q9UBW5 565 aaPredicted RBP20.04■□□□□ 0.8
USB1-211ENST00000565662 RABGAP1Q9Y3P9 1069 aa20.04■□□□□ 0.8
USB1-211ENST00000565662 KIAA0100Q14667 2235 aaKnown RBP20.04■□□□□ 0.8
USB1-211ENST00000565662 PDE4DIPQ5VU43 2346 aa20.03■□□□□ 0.8
USB1-211ENST00000565662 USP17L12C9JPN9 530 aa20.03■□□□□ 0.8
USB1-211ENST00000565662 USP17L21D6R901 530 aa20.03■□□□□ 0.8
USB1-211ENST00000565662 ADCY3O60266 1144 aa20.03■□□□□ 0.8
USB1-211ENST00000565662 SLC3A2P08195 630 aaKnown RBP20.03■□□□□ 0.8
USB1-211ENST00000565662 VCAM1P19320 739 aa20.03■□□□□ 0.8
USB1-211ENST00000565662 CTGFP29279 349 aa20.03■□□□□ 0.8
USB1-211ENST00000565662 FLT3LGP49771 235 aa20.03■□□□□ 0.8
USB1-211ENST00000565662 ICA1Q05084 483 aa20.03■□□□□ 0.8
USB1-211ENST00000565662 PPP4R3BQ5MIZ7 849 aa20.03■□□□□ 0.8
USB1-211ENST00000565662 ANKRD45Q5TZF3 282 aa20.03■□□□□ 0.8
USB1-211ENST00000565662 MB21D1Q8N884 522 aa20.03■□□□□ 0.8
USB1-211ENST00000565662 PI4K2BQ8TCG2 481 aa20.03■□□□□ 0.8
USB1-211ENST00000565662 EMILIN3Q9NT22 766 aa20.03■□□□□ 0.8
USB1-211ENST00000565662 GPAA1O43292 621 aa20.02■□□□□ 0.8
USB1-211ENST00000565662 CDK8P49336 464 aa20.02■□□□□ 0.8
USB1-211ENST00000565662 ERVK-9P63128 1117 aa20.02■□□□□ 0.8
USB1-211ENST00000565662 ERVK-24P63145 666 aa20.02■□□□□ 0.8
USB1-211ENST00000565662 JAG1P78504 1218 aa20.02■□□□□ 0.8
USB1-211ENST00000565662 PRPF38BQ5VTL8 546 aaKnown RBP20.02■□□□□ 0.8
USB1-211ENST00000565662 SH3TC2Q8TF17 1288 aa20.02■□□□□ 0.8
USB1-211ENST00000565662 EVI5LQ96CN4 794 aa20.02■□□□□ 0.8
USB1-211ENST00000565662 KANSL2Q9H9L4 492 aa20.02■□□□□ 0.8
USB1-211ENST00000565662 CWC22Q9HCG8 908 aaKnown RBP20.02■□□□□ 0.8
USB1-211ENST00000565662 STAP2Q9UGK3 403 aa20.02■□□□□ 0.8
USB1-211ENST00000565662 GJB1P08034 283 aa20.01■□□□□ 0.79
USB1-211ENST00000565662 TDO2P48775 406 aa20.01■□□□□ 0.79
USB1-211ENST00000565662 SEPT2Q15019 361 aa20.01■□□□□ 0.79
USB1-211ENST00000565662 CATSPERGQ6ZRH7 1159 aa20.01■□□□□ 0.79
USB1-211ENST00000565662 NUDT12Q9BQG2 462 aa20.01■□□□□ 0.79
USB1-211ENST00000565662 HOXC10Q9NYD6 342 aa20.01■□□□□ 0.79
USB1-211ENST00000565662 SYNPO2Q9UMS6 1093 aa20.01■□□□□ 0.79
USB1-211ENST00000565662 SALL3Q9BXA9 1300 aa20.01■□□□□ 0.79
USB1-211ENST00000565662 POTEFA5A3E0 1075 aa20■□□□□ 0.79
USB1-211ENST00000565662 PRKAB2O43741 272 aa20■□□□□ 0.79
USB1-211ENST00000565662 HMGCRP04035 888 aa20■□□□□ 0.79
USB1-211ENST00000565662 XRCC5P13010 732 aaKnown RBP20■□□□□ 0.79
USB1-211ENST00000565662 CTR9Q6PD62 1173 aa20■□□□□ 0.79
USB1-211ENST00000565662 OSBP2Q969R2 916 aa20■□□□□ 0.79
USB1-211ENST00000565662 P2RX7Q99572 595 aaKnown RBP20■□□□□ 0.79
USB1-211ENST00000565662 GOPCQ9HD26 462 aa20■□□□□ 0.79
USB1-211ENST00000565662 TMX2Q9Y320 296 aa20■□□□□ 0.79
USB1-211ENST00000565662 WDR46O15213 610 aaKnown RBP19.99■□□□□ 0.79
USB1-211ENST00000565662 ZYXQ15942 572 aaKnown RBP19.99■□□□□ 0.79
USB1-211ENST00000565662 RPAP3Q9H6T3 665 aaPredicted RBP19.99■□□□□ 0.79
USB1-211ENST00000565662 MKNK2Q9HBH9 465 aa19.99■□□□□ 0.79
USB1-211ENST00000565662 GSG1L2A8MUP6 293 aa19.98■□□□□ 0.79
USB1-211ENST00000565662 PATL2C9JE40 543 aaKnown RBP19.98■□□□□ 0.79
USB1-211ENST00000565662 GUCY1A2P33402 732 aa19.98■□□□□ 0.79
USB1-211ENST00000565662 GJA8P48165 433 aa19.98■□□□□ 0.79
USB1-211ENST00000565662 PDE4BQ07343 736 aa19.98■□□□□ 0.79
USB1-211ENST00000565662 COG2Q14746 738 aa19.98■□□□□ 0.79
USB1-211ENST00000565662 ZMYM1Q5SVZ6 1142 aa19.98■□□□□ 0.79
USB1-211ENST00000565662 SMC5Q8IY18 1101 aa19.98■□□□□ 0.79
USB1-211ENST00000565662 RNF208Q9H0X6 261 aa19.98■□□□□ 0.79
USB1-211ENST00000565662 VCPKMTQ9H867 229 aa19.98■□□□□ 0.79
USB1-211ENST00000565662 GABRQQ9UN88 632 aa19.98■□□□□ 0.79
USB1-211ENST00000565662 IVNS1ABPQ9Y6Y0 642 aa19.98■□□□□ 0.79
USB1-211ENST00000565662 GREB1LQ9C091 1923 aaPredicted RBP19.98■□□□□ 0.79
USB1-211ENST00000565662 A0A0G2JMZ2 1700 aa19.97■□□□□ 0.79
USB1-211ENST00000565662 APPP05067 770 aa19.97■□□□□ 0.79
USB1-211ENST00000565662 CYP2D6P10635 497 aa19.97■□□□□ 0.79
USB1-211ENST00000565662 CCL5P13501 91 aa19.97■□□□□ 0.79
USB1-211ENST00000565662 RGS2P41220 211 aa19.97■□□□□ 0.79
USB1-211ENST00000565662 PDE1AP54750 535 aa19.97■□□□□ 0.79
USB1-211ENST00000565662 MFAP1P55081 439 aaKnown RBP19.97■□□□□ 0.79
USB1-211ENST00000565662 SHROOM1Q2M3G4 852 aaPredicted RBP19.97■□□□□ 0.79
USB1-211ENST00000565662 TSHZ3Q63HK5 1081 aa19.97■□□□□ 0.79
USB1-211ENST00000565662 PAGR1Q9BTK6 254 aa19.97■□□□□ 0.79
USB1-211ENST00000565662 TANGO6Q9C0B7 1094 aa19.97■□□□□ 0.79
USB1-211ENST00000565662 NAPBQ9H115 298 aa19.97■□□□□ 0.79
USB1-211ENST00000565662 CENPFP49454 3210 aa19.96■□□□□ 0.79
USB1-211ENST00000565662 INHAP05111 366 aa19.96■□□□□ 0.79
USB1-211ENST00000565662 AKR1B1P15121 316 aa19.96■□□□□ 0.79
USB1-211ENST00000565662 COPB2P35606 906 aa19.96■□□□□ 0.79
USB1-211ENST00000565662 PLEKHH3Q7Z736 793 aa19.96■□□□□ 0.79
USB1-211ENST00000565662 SLC44A5Q8NCS7 719 aa19.96■□□□□ 0.79
USB1-211ENST00000565662 ACER1Q8TDN7 264 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms