RNA–Protein interactions for RNA: ENST00000564988.5

TM6SF1-206, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 4

Gene TM6SF1, Length 548 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-206ENST00000564988 UPF2Q9HAU5 1272 aaKnown RBP28.82■■■□□ 2.2
TM6SF1-206ENST00000564988 AFG3L2Q9Y4W6 797 aa28.82■■■□□ 2.2
TM6SF1-206ENST00000564988 SNX14Q9Y5W7 946 aa28.82■■■□□ 2.2
TM6SF1-206ENST00000564988 GREB1LQ9C091 1923 aaPredicted RBP28.82■■■□□ 2.2
TM6SF1-206ENST00000564988 FAM155AB1AL88 458 aaPredicted RBP28.81■■■□□ 2.2
TM6SF1-206ENST00000564988 BACH2Q9BYV9 841 aa28.81■■■□□ 2.2
TM6SF1-206ENST00000564988 ARHGEF10LQ9HCE6 1279 aa28.81■■■□□ 2.2
TM6SF1-206ENST00000564988 TCP11L1Q9NUJ3 509 aa28.81■■■□□ 2.2
TM6SF1-206ENST00000564988 CXCL11O14625 94 aa28.8■■■□□ 2.2
TM6SF1-206ENST00000564988 IRF6O14896 467 aa28.8■■■□□ 2.2
TM6SF1-206ENST00000564988 GRM1Q13255 1194 aa28.8■■■□□ 2.2
TM6SF1-206ENST00000564988 CCDC178Q5BJE1 867 aa28.8■■■□□ 2.2
TM6SF1-206ENST00000564988 IQCA1Q86XH1 822 aa28.8■■■□□ 2.2
TM6SF1-206ENST00000564988 CEP95Q96GE4 821 aa28.8■■■□□ 2.2
TM6SF1-206ENST00000564988 MTMR4Q9NYA4 1195 aa28.8■■■□□ 2.2
TM6SF1-206ENST00000564988 ZSWIM5Q9P217 1185 aa28.8■■■□□ 2.2
TM6SF1-206ENST00000564988 KCNH4Q9UQ05 1017 aa28.8■■■□□ 2.2
TM6SF1-206ENST00000564988 MKRN3Q13064 507 aaKnown RBP28.79■■■□□ 2.2
TM6SF1-206ENST00000564988 SPP2Q13103 211 aa28.79■■■□□ 2.2
TM6SF1-206ENST00000564988 NOGQ13253 232 aa28.79■■■□□ 2.2
TM6SF1-206ENST00000564988 CLEC10AQ8IUN9 316 aa28.79■■■□□ 2.2
TM6SF1-206ENST00000564988 MB21D2Q8IYB1 491 aaPredicted RBP28.79■■■□□ 2.2
TM6SF1-206ENST00000564988 NEK1Q96PY6 1258 aa28.79■■■□□ 2.2
TM6SF1-206ENST00000564988 SH2D4AQ9H788 454 aa28.79■■■□□ 2.2
TM6SF1-206ENST00000564988 NYAP2Q9P242 653 aa28.79■■■□□ 2.2
TM6SF1-206ENST00000564988 TRIM75PA6NK02 468 aa28.78■■■□□ 2.2
TM6SF1-206ENST00000564988 GTF2A2P52657 109 aa28.78■■■□□ 2.2
TM6SF1-206ENST00000564988 SNAPC2Q13487 334 aa28.78■■■□□ 2.2
TM6SF1-206ENST00000564988 NKX2-3Q8TAU0 364 aa28.78■■■□□ 2.2
TM6SF1-206ENST00000564988 PHIPQ8WWQ0 1821 aa28.78■■■□□ 2.2
TM6SF1-206ENST00000564988 WDR33Q9C0J8 1336 aaKnown RBP28.77■■■□□ 2.2
TM6SF1-206ENST00000564988 USP17L10C9JJH3 530 aa28.77■■■□□ 2.2
TM6SF1-206ENST00000564988 TTLL1O95922 423 aa28.77■■■□□ 2.2
TM6SF1-206ENST00000564988 EEF2P13639 858 aaKnown RBP28.77■■■□□ 2.2
TM6SF1-206ENST00000564988 ANAPC15P60006 121 aa28.77■■■□□ 2.2
TM6SF1-206ENST00000564988 ATP2B2Q01814 1243 aa28.77■■■□□ 2.2
TM6SF1-206ENST00000564988 FEZ1Q99689 392 aa28.77■■■□□ 2.2
TM6SF1-206ENST00000564988 UBAC1Q9BSL1 405 aa28.77■■■□□ 2.2
TM6SF1-206ENST00000564988 IL17RBQ9NRM6 502 aa28.77■■■□□ 2.2
TM6SF1-206ENST00000564988 NMT2O60551 498 aa28.76■■■□□ 2.19
TM6SF1-206ENST00000564988 HMGB1P09429 215 aaKnown RBP28.76■■■□□ 2.19
TM6SF1-206ENST00000564988 PSMA5P28066 241 aa28.76■■■□□ 2.19
TM6SF1-206ENST00000564988 MCM5P33992 734 aa28.76■■■□□ 2.19
TM6SF1-206ENST00000564988 VEGFBP49765 207 aa28.76■■■□□ 2.19
TM6SF1-206ENST00000564988 BACE1P56817 501 aa28.76■■■□□ 2.19
TM6SF1-206ENST00000564988 ADCK5Q3MIX3 580 aa28.76■■■□□ 2.19
TM6SF1-206ENST00000564988 CYB5R4Q7L1T6 521 aa28.76■■■□□ 2.19
TM6SF1-206ENST00000564988 ACER1Q8TDN7 264 aa28.76■■■□□ 2.19
TM6SF1-206ENST00000564988 JAKMIP1Q96N16 626 aaKnown RBP28.76■■■□□ 2.19
TM6SF1-206ENST00000564988 ZSCAN10Q96SZ4 725 aaPredicted RBP28.76■■■□□ 2.19
TM6SF1-206ENST00000564988 MANSC4A6NHS7 340 aaPredicted RBP28.75■■■□□ 2.19
TM6SF1-206ENST00000564988 C19orf81C9J6K1 198 aa28.75■■■□□ 2.19
TM6SF1-206ENST00000564988 USP14P54578 494 aa28.75■■■□□ 2.19
TM6SF1-206ENST00000564988 MTMR2Q13614 643 aa28.75■■■□□ 2.19
TM6SF1-206ENST00000564988 SART3Q15020 963 aaKnown RBP28.75■■■□□ 2.19
TM6SF1-206ENST00000564988 SIAH1Q8IUQ4 282 aa28.75■■■□□ 2.19
TM6SF1-206ENST00000564988 ZKSCAN3Q9BRR0 538 aa28.75■■■□□ 2.19
TM6SF1-206ENST00000564988 KIAA1683Q9H0B3 1180 aa28.75■■■□□ 2.19
TM6SF1-206ENST00000564988 CLIP2Q9UDT6 1046 aa28.75■■■□□ 2.19
TM6SF1-206ENST00000564988 STX8Q9UNK0 236 aa28.75■■■□□ 2.19
TM6SF1-206ENST00000564988 TMX2Q9Y320 296 aa28.75■■■□□ 2.19
TM6SF1-206ENST00000564988 A0A0G2JLL6 359 aaPredicted RBP28.74■■■□□ 2.19
TM6SF1-206ENST00000564988 CETPP11597 493 aa28.74■■■□□ 2.19
TM6SF1-206ENST00000564988 NOVP48745 357 aa28.74■■■□□ 2.19
TM6SF1-206ENST00000564988 PRRT2Q7Z6L0 340 aaPredicted RBP28.74■■■□□ 2.19
TM6SF1-206ENST00000564988 TTC14Q96N46 770 aa28.74■■■□□ 2.19
TM6SF1-206ENST00000564988 SYNPO2Q9UMS6 1093 aa28.74■■■□□ 2.19
TM6SF1-206ENST00000564988 TNKSO95271 1327 aa28.73■■■□□ 2.19
TM6SF1-206ENST00000564988 A0A1W2PRG0 241 aa28.73■■■□□ 2.19
TM6SF1-206ENST00000564988 ERICH2A1L162 156 aa28.73■■■□□ 2.19
TM6SF1-206ENST00000564988 SH3D19Q5HYK7 790 aa28.73■■■□□ 2.19
TM6SF1-206ENST00000564988 USP17L2Q6R6M4 530 aa28.73■■■□□ 2.19
TM6SF1-206ENST00000564988 DGKHQ86XP1 1220 aa28.73■■■□□ 2.19
TM6SF1-206ENST00000564988 MKL1Q969V6 931 aa28.73■■■□□ 2.19
TM6SF1-206ENST00000564988 MS4A4AQ96JQ5 239 aa28.73■■■□□ 2.19
TM6SF1-206ENST00000564988 MTA3Q9BTC8 594 aa28.73■■■□□ 2.19
TM6SF1-206ENST00000564988 C22orf23Q9BZE7 217 aa28.73■■■□□ 2.19
TM6SF1-206ENST00000564988 WDR19Q8NEZ3 1342 aa28.72■■■□□ 2.19
TM6SF1-206ENST00000564988 PRC1O43663 620 aa28.72■■■□□ 2.19
TM6SF1-206ENST00000564988 ANTXR2P58335 489 aa28.72■■■□□ 2.19
TM6SF1-206ENST00000564988 SREBF2Q12772 1141 aa28.72■■■□□ 2.19
TM6SF1-206ENST00000564988 BLOC1S2Q6QNY1 142 aa28.72■■■□□ 2.19
TM6SF1-206ENST00000564988 TM6SF1Q9BZW5 370 aa28.72■■■□□ 2.19
TM6SF1-206ENST00000564988 TMOD4Q9NZQ9 345 aa28.72■■■□□ 2.19
TM6SF1-206ENST00000564988 CCL15-CCL14A0A0B4J2E2 113 aa28.71■■■□□ 2.19
TM6SF1-206ENST00000564988 IFIT3O14879 490 aaKnown RBP28.71■■■□□ 2.19
TM6SF1-206ENST00000564988 AOC2O75106 756 aa28.71■■■□□ 2.19
TM6SF1-206ENST00000564988 MAP2K2P36507 400 aa28.71■■■□□ 2.19
TM6SF1-206ENST00000564988 HMGCS2P54868 508 aa28.71■■■□□ 2.19
TM6SF1-206ENST00000564988 INHBEP58166 350 aa28.71■■■□□ 2.19
TM6SF1-206ENST00000564988 KIF23Q02241 960 aaPredicted RBP28.71■■■□□ 2.19
TM6SF1-206ENST00000564988 CCL15Q16663 113 aa28.71■■■□□ 2.19
TM6SF1-206ENST00000564988 DHX32Q7L7V1 743 aaKnown RBP28.71■■■□□ 2.19
TM6SF1-206ENST00000564988 FASTKD5Q7L8L6 764 aaKnown RBP28.71■■■□□ 2.19
TM6SF1-206ENST00000564988 CHST3Q7LGC8 479 aa28.71■■■□□ 2.19
TM6SF1-206ENST00000564988 REM2Q8IYK8 340 aaPredicted RBP28.71■■■□□ 2.19
TM6SF1-206ENST00000564988 TMEM87BQ96K49 555 aa28.71■■■□□ 2.19
TM6SF1-206ENST00000564988 GOPCQ9HD26 462 aa28.71■■■□□ 2.19
TM6SF1-206ENST00000564988 TOP1P11387 765 aaKnown RBP28.7■■■□□ 2.18
TM6SF1-206ENST00000564988 CASTP20810 708 aaKnown RBP28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms