RNA–Protein interactions for RNA: ENST00000564791.5

SNX29-204, Transcript of sorting nexin 29, humanhuman

TSL 1 (best)

Gene SNX29, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-204ENST00000564791 IGKV6D-41A0A0C4DH26 115 aa13.12□□□□□ -0.31
SNX29-204ENST00000564791 CALM1P0DP23 149 aa13.12□□□□□ -0.31
SNX29-204ENST00000564791 CALM2P0DP24 149 aa13.12□□□□□ -0.31
SNX29-204ENST00000564791 CALM3P0DP25 149 aa13.12□□□□□ -0.31
SNX29-204ENST00000564791 FOSBP53539 338 aa13.12□□□□□ -0.31
SNX29-204ENST00000564791 CDC37L1Q7L3B6 337 aa13.12□□□□□ -0.31
SNX29-204ENST00000564791 FAM83AQ86UY5 434 aa13.12□□□□□ -0.31
SNX29-204ENST00000564791 CDAN1Q8IWY9 1227 aa13.12□□□□□ -0.31
SNX29-204ENST00000564791 PHKBQ93100 1093 aa13.12□□□□□ -0.31
SNX29-204ENST00000564791 TMEM47Q9BQJ4 181 aa13.12□□□□□ -0.31
SNX29-204ENST00000564791 TMEM39BQ9GZU3 492 aa13.12□□□□□ -0.31
SNX29-204ENST00000564791 GPRC5DQ9NZD1 345 aa13.12□□□□□ -0.31
SNX29-204ENST00000564791 ORC3Q9UBD5 711 aaPredicted RBP13.12□□□□□ -0.31
SNX29-204ENST00000564791 TAOK2Q9UL54 1235 aa13.12□□□□□ -0.31
SNX29-204ENST00000564791 STX8Q9UNK0 236 aa13.12□□□□□ -0.31
SNX29-204ENST00000564791 KIF3AQ9Y496 699 aa13.12□□□□□ -0.31
SNX29-204ENST00000564791 ASTN2O75129 1339 aaPredicted RBP13.11□□□□□ -0.31
SNX29-204ENST00000564791 TCHHQ07283 1943 aa13.11□□□□□ -0.31
SNX29-204ENST00000564791 CCDC196A0A1B0GTZ2 297 aa13.11□□□□□ -0.31
SNX29-204ENST00000564791 H7C1D1 291 aa13.11□□□□□ -0.31
SNX29-204ENST00000564791 IFNAR1P17181 557 aa13.11□□□□□ -0.31
SNX29-204ENST00000564791 NOVP48745 357 aa13.11□□□□□ -0.31
SNX29-204ENST00000564791 NBR1Q14596 966 aa13.11□□□□□ -0.31
SNX29-204ENST00000564791 GPR162Q16538 588 aa13.11□□□□□ -0.31
SNX29-204ENST00000564791 TATDN1Q6P1N9 297 aa13.11□□□□□ -0.31
SNX29-204ENST00000564791 PNMA1Q8ND90 353 aa13.11□□□□□ -0.31
SNX29-204ENST00000564791 TRPM4Q8TD43 1214 aa13.11□□□□□ -0.31
SNX29-204ENST00000564791 GBP4Q96PP9 640 aa13.11□□□□□ -0.31
SNX29-204ENST00000564791 SCAF8Q9UPN6 1271 aaKnown RBP13.11□□□□□ -0.31
SNX29-204ENST00000564791 UTRNP46939 3433 aa13.11□□□□□ -0.31
SNX29-204ENST00000564791 MPHOSPH10O00566 681 aaKnown RBP13.1□□□□□ -0.31
SNX29-204ENST00000564791 DDNO94850 711 aaPredicted RBP13.1□□□□□ -0.31
SNX29-204ENST00000564791 BAG4O95429 457 aaKnown RBP13.1□□□□□ -0.31
SNX29-204ENST00000564791 F13A1P00488 732 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 MCM4P33991 863 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 PPP2R5BQ15173 497 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 SHROOM1Q2M3G4 852 aaPredicted RBP13.1□□□□□ -0.31
SNX29-204ENST00000564791 CERKLQ49MI3 558 aaPredicted RBP13.1□□□□□ -0.31
SNX29-204ENST00000564791 CLEC17AQ6ZS10 378 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 CLEC10AQ8IUN9 316 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 CTCFLQ8NI51 663 aaPredicted RBP13.1□□□□□ -0.31
SNX29-204ENST00000564791 CCDC17Q96LX7 622 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 RBM28Q9NW13 759 aaKnown RBP13.1□□□□□ -0.31
SNX29-204ENST00000564791 MTMR4Q9NYA4 1195 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 PGAP2Q9UHJ9 254 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 HACL1Q9UJ83 578 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 MYH15Q9Y2K3 1946 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 SRCAPQ6ZRS2 3230 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 STK36Q9NRP7 1315 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 PLEKHA8P1O95397 391 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 FMNL1O95466 1100 aaPredicted RBP13.1□□□□□ -0.31
SNX29-204ENST00000564791 TOP1P11387 765 aaKnown RBP13.1□□□□□ -0.31
SNX29-204ENST00000564791 PDIA4P13667 645 aaKnown RBP13.1□□□□□ -0.31
SNX29-204ENST00000564791 EPS15P42566 896 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 TNNI2P48788 182 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 SSRP1Q08945 709 aaKnown RBP13.1□□□□□ -0.31
SNX29-204ENST00000564791 TMTC3Q6ZXV5 915 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 NBPF11Q86T75 865 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 CMTR1Q8N1G2 835 aaKnown RBP13.1□□□□□ -0.31
SNX29-204ENST00000564791 CHAMP1Q96JM3 812 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 SLC26A6Q9BXS9 759 aa13.1□□□□□ -0.31
SNX29-204ENST00000564791 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.1□□□□□ -0.31
SNX29-204ENST00000564791 HERC5Q9UII4 1024 aaKnown RBP13.1□□□□□ -0.31
SNX29-204ENST00000564791 BAZ2BQ9UIF8 2168 aaKnown RBP13.09□□□□□ -0.31
SNX29-204ENST00000564791 H3BQV1 296 aa13.09□□□□□ -0.31
SNX29-204ENST00000564791 GDF11O95390 407 aa13.09□□□□□ -0.31
SNX29-204ENST00000564791 TNFAIP1Q13829 316 aa13.09□□□□□ -0.31
SNX29-204ENST00000564791 RASA3Q14644 834 aa13.09□□□□□ -0.31
SNX29-204ENST00000564791 GRM4Q14833 912 aa13.09□□□□□ -0.31
SNX29-204ENST00000564791 IFFO2Q5TF58 517 aa13.09□□□□□ -0.31
SNX29-204ENST00000564791 CCDC82Q8N4S0 544 aa13.09□□□□□ -0.31
SNX29-204ENST00000564791 MAP3K14Q99558 947 aa13.09□□□□□ -0.31
SNX29-204ENST00000564791 MTMR7Q9Y216 660 aa13.09□□□□□ -0.31
SNX29-204ENST00000564791 ATAD5Q96QE3 1844 aa13.08□□□□□ -0.31
SNX29-204ENST00000564791 UBE2Q2LH0YL09 131 aa13.08□□□□□ -0.32
SNX29-204ENST00000564791 TTLL1O95922 423 aa13.08□□□□□ -0.32
SNX29-204ENST00000564791 GUCY1B3Q02153 619 aa13.08□□□□□ -0.32
SNX29-204ENST00000564791 FUT2Q10981 343 aa13.08□□□□□ -0.32
SNX29-204ENST00000564791 RRP1BQ14684 758 aaKnown RBP13.08□□□□□ -0.32
SNX29-204ENST00000564791 RASGRP2Q7LDG7 609 aa13.08□□□□□ -0.32
SNX29-204ENST00000564791 FERMT3Q86UX7 667 aa13.08□□□□□ -0.32
SNX29-204ENST00000564791 LRRC47Q8N1G4 583 aaKnown RBP13.08□□□□□ -0.32
SNX29-204ENST00000564791 C8orf76Q96K31 380 aa13.08□□□□□ -0.32
SNX29-204ENST00000564791 TEPSINQ96N21 525 aa13.08□□□□□ -0.32
SNX29-204ENST00000564791 AIFM3Q96NN9 605 aa13.08□□□□□ -0.32
SNX29-204ENST00000564791 ALG1Q9BT22 464 aa13.08□□□□□ -0.32
SNX29-204ENST00000564791 POLR2AP24928 1970 aaKnown RBP13.08□□□□□ -0.32
SNX29-204ENST00000564791 CNTNAP5Q8WYK1 1306 aa13.08□□□□□ -0.32
SNX29-204ENST00000564791 KIF5BP33176 963 aa13.07□□□□□ -0.32
SNX29-204ENST00000564791 GUCY1A2P33402 732 aa13.07□□□□□ -0.32
SNX29-204ENST00000564791 JAG1P78504 1218 aa13.07□□□□□ -0.32
SNX29-204ENST00000564791 SEPT2Q15019 361 aa13.07□□□□□ -0.32
SNX29-204ENST00000564791 ABCB5Q2M3G0 1257 aa13.07□□□□□ -0.32
SNX29-204ENST00000564791 FOXD4L6Q3SYB3 417 aaPredicted RBP13.07□□□□□ -0.32
SNX29-204ENST00000564791 OTUD7BQ6GQQ9 843 aa13.07□□□□□ -0.32
SNX29-204ENST00000564791 FOXD4L3Q6VB84 417 aaPredicted RBP13.07□□□□□ -0.32
SNX29-204ENST00000564791 TMEM179Q6ZVK1 233 aa13.07□□□□□ -0.32
SNX29-204ENST00000564791 TRIM22Q8IYM9 498 aa13.07□□□□□ -0.32
SNX29-204ENST00000564791 SRBD1Q8N5C6 995 aaKnown RBP13.07□□□□□ -0.32
SNX29-204ENST00000564791 CLIP2Q9UDT6 1046 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms