RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 MAPK4P31152 587 aa22.87■■□□□ 1.25
NME3-207ENST00000564628 MAP3K12Q12852 859 aa22.87■■□□□ 1.25
NME3-207ENST00000564628 DNAJC2Q99543 621 aaKnown RBP22.87■■□□□ 1.25
NME3-207ENST00000564628 RWDD1Q9H446 243 aaPredicted RBP22.87■■□□□ 1.25
NME3-207ENST00000564628 TXNRD2Q9NNW7 524 aa22.87■■□□□ 1.25
NME3-207ENST00000564628 PALD1Q9ULE6 856 aa22.87■■□□□ 1.25
NME3-207ENST00000564628 DDX60LQ5H9U9 1706 aaKnown RBP22.86■■□□□ 1.25
NME3-207ENST00000564628 SOX1O00570 391 aaPredicted RBP22.86■■□□□ 1.25
NME3-207ENST00000564628 HLA-DOAP06340 250 aa22.86■■□□□ 1.25
NME3-207ENST00000564628 IRX6P78412 446 aaPredicted RBP22.86■■□□□ 1.25
NME3-207ENST00000564628 C7orf61Q8IZ16 206 aa22.86■■□□□ 1.25
NME3-207ENST00000564628 MAGEB6Q8N7X4 407 aa22.86■■□□□ 1.25
NME3-207ENST00000564628 EDC3Q96F86 508 aaKnown RBP22.86■■□□□ 1.25
NME3-207ENST00000564628 C11orf49Q9H6J7 331 aa22.86■■□□□ 1.25
NME3-207ENST00000564628 PAG1Q9NWQ8 432 aa22.86■■□□□ 1.25
NME3-207ENST00000564628 RBPJLQ9UBG7 517 aa22.86■■□□□ 1.25
NME3-207ENST00000564628 GDF11O95390 407 aa22.85■■□□□ 1.25
NME3-207ENST00000564628 IGHDP01880 384 aa22.85■■□□□ 1.25
NME3-207ENST00000564628 PRKAR2AP13861 404 aaKnown RBP22.85■■□□□ 1.25
NME3-207ENST00000564628 CYP7A1P22680 504 aa22.85■■□□□ 1.25
NME3-207ENST00000564628 CERS3Q8IU89 383 aa22.85■■□□□ 1.25
NME3-207ENST00000564628 OTUD7AQ8TE49 926 aaPredicted RBP22.85■■□□□ 1.25
NME3-207ENST00000564628 GPATCH3Q96I76 525 aa22.85■■□□□ 1.25
NME3-207ENST00000564628 TTC41PQ6P2S7 1318 aa22.84■■□□□ 1.25
NME3-207ENST00000564628 LAMA3Q16787 3333 aa22.84■■□□□ 1.25
NME3-207ENST00000564628 PDE6AP16499 860 aa22.84■■□□□ 1.25
NME3-207ENST00000564628 ERVK-9P63128 1117 aa22.84■■□□□ 1.25
NME3-207ENST00000564628 ERVK-24P63145 666 aa22.84■■□□□ 1.25
NME3-207ENST00000564628 SHROOM1Q2M3G4 852 aaPredicted RBP22.84■■□□□ 1.25
NME3-207ENST00000564628 USP6NLQ92738 828 aa22.84■■□□□ 1.25
NME3-207ENST00000564628 ZKSCAN1P17029 563 aaPredicted RBP22.83■■□□□ 1.25
NME3-207ENST00000564628 ANKRD45Q5TZF3 282 aa22.83■■□□□ 1.25
NME3-207ENST00000564628 GPR153Q6NV75 609 aa22.83■■□□□ 1.25
NME3-207ENST00000564628 USP17L2Q6R6M4 530 aa22.83■■□□□ 1.25
NME3-207ENST00000564628 LRCH3Q96II8 777 aa22.83■■□□□ 1.25
NME3-207ENST00000564628 EMILIN3Q9NT22 766 aa22.83■■□□□ 1.25
NME3-207ENST00000564628 TCRBV5S4A2TA0A5A2 114 aa22.82■■□□□ 1.24
NME3-207ENST00000564628 PEX10O60683 326 aa22.82■■□□□ 1.24
NME3-207ENST00000564628 RGS2P41220 211 aa22.82■■□□□ 1.24
NME3-207ENST00000564628 Q3C1V9 767 aa22.82■■□□□ 1.24
NME3-207ENST00000564628 MORN1Q5T089 497 aa22.82■■□□□ 1.24
NME3-207ENST00000564628 TSHZ3Q63HK5 1081 aa22.82■■□□□ 1.24
NME3-207ENST00000564628 GPR142Q7Z601 462 aa22.82■■□□□ 1.24
NME3-207ENST00000564628 CCAR1Q8IX12 1150 aaKnown RBP22.82■■□□□ 1.24
NME3-207ENST00000564628 PI4K2BQ8TCG2 481 aa22.82■■□□□ 1.24
NME3-207ENST00000564628 C12orf42Q96LP6 360 aa22.82■■□□□ 1.24
NME3-207ENST00000564628 SAP30BPQ9UHR5 308 aaKnown RBP22.82■■□□□ 1.24
NME3-207ENST00000564628 ZMYND8Q9ULU4 1186 aaPredicted RBP22.82■■□□□ 1.24
NME3-207ENST00000564628 MYH1P12882 1939 aa22.82■■□□□ 1.24
NME3-207ENST00000564628 MX1P20591 662 aa22.81■■□□□ 1.24
NME3-207ENST00000564628 DYNLL1P63167 89 aaKnown RBP22.81■■□□□ 1.24
NME3-207ENST00000564628 SLC9C2Q5TAH2 1124 aa22.81■■□□□ 1.24
NME3-207ENST00000564628 TATDN1Q6P1N9 297 aa22.81■■□□□ 1.24
NME3-207ENST00000564628 PLEKHH3Q7Z736 793 aa22.81■■□□□ 1.24
NME3-207ENST00000564628 EHD4Q9H223 541 aa22.81■■□□□ 1.24
NME3-207ENST00000564628 PORCNQ9H237 461 aa22.81■■□□□ 1.24
NME3-207ENST00000564628 NAV1Q8NEY1 1877 aa22.8■■□□□ 1.24
NME3-207ENST00000564628 GH2P01242 217 aa22.8■■□□□ 1.24
NME3-207ENST00000564628 COL6A1P12109 1028 aa22.8■■□□□ 1.24
NME3-207ENST00000564628 CACNB2Q08289 660 aaPredicted RBP22.8■■□□□ 1.24
NME3-207ENST00000564628 POTEEQ6S8J3 1075 aa22.8■■□□□ 1.24
NME3-207ENST00000564628 APBA2Q99767 749 aa22.8■■□□□ 1.24
NME3-207ENST00000564628 RIOK1Q9BRS2 568 aaKnown RBP22.8■■□□□ 1.24
NME3-207ENST00000564628 PAGR1Q9BTK6 254 aa22.8■■□□□ 1.24
NME3-207ENST00000564628 RABGAP1Q9Y3P9 1069 aa22.8■■□□□ 1.24
NME3-207ENST00000564628 PFASO15067 1338 aa22.8■■□□□ 1.24
NME3-207ENST00000564628 ZNF532Q9HCE3 1301 aa22.8■■□□□ 1.24
NME3-207ENST00000564628 ADD2P35612 726 aa22.79■■□□□ 1.24
NME3-207ENST00000564628 MIGA1Q8NAN2 632 aa22.79■■□□□ 1.24
NME3-207ENST00000564628 SERPINB13Q9UIV8 391 aa22.79■■□□□ 1.24
NME3-207ENST00000564628 USP17L15C9J2P7 530 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 USP17L13C9JLJ4 530 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 USP17L11C9JVI0 530 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 USP17L18D6R9N7 530 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 USP17L22D6RA61 530 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 USP17L17D6RBQ6 530 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 USP17L19D6RCP7 530 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 USP17L20D6RJB6 530 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 ERC2O15083 957 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 GLRX3O76003 335 aaKnown RBP22.78■■□□□ 1.24
NME3-207ENST00000564628 MAGEA10P43363 369 aaPredicted RBP22.78■■□□□ 1.24
NME3-207ENST00000564628 USP14P54578 494 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 CCNA1P78396 465 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 USP17L24Q0WX57 530 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 LRIT3Q3SXY7 679 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 LHX8Q68G74 356 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 SLC17A8Q8NDX2 589 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.78■■□□□ 1.245e-32■■■■□ 24.1
NME3-207ENST00000564628 ZBTB47Q9UFB7 747 aaPredicted RBP22.78■■□□□ 1.24
NME3-207ENST00000564628 GTF3C3Q9Y5Q9 886 aa22.78■■□□□ 1.24
NME3-207ENST00000564628 SYN1P17600 705 aa22.77■■□□□ 1.24
NME3-207ENST00000564628 USP5P45974 858 aa22.77■■□□□ 1.24
NME3-207ENST00000564628 NUCB1Q02818 461 aa22.77■■□□□ 1.24
NME3-207ENST00000564628 UBE3CQ15386 1083 aa22.77■■□□□ 1.24
NME3-207ENST00000564628 CCL14Q16627 93 aa22.77■■□□□ 1.24
NME3-207ENST00000564628 TDHQ8IZJ6 230 aa22.77■■□□□ 1.24
NME3-207ENST00000564628 KBTBD3Q8NAB2 608 aa22.77■■□□□ 1.24
NME3-207ENST00000564628 FEZ1Q99689 392 aa22.77■■□□□ 1.24
NME3-207ENST00000564628 KIAA1683Q9H0B3 1180 aa22.77■■□□□ 1.24
NME3-207ENST00000564628 CCND3P30281 292 aaPredicted RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms