RNA–Protein interactions for RNA: ENST00000564587.5

COMMD4-210, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 588 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-210ENST00000564587 IL17RBQ9NRM6 502 aa18.05■□□□□ 0.48
COMMD4-210ENST00000564587 PI4KBQ9UBF8 816 aa18.05■□□□□ 0.48
COMMD4-210ENST00000564587 CEP350Q5VT06 3117 aa18.05■□□□□ 0.48
COMMD4-210ENST00000564587 FIBPO43427 364 aa18.04■□□□□ 0.48
COMMD4-210ENST00000564587 RAD17O75943 681 aa18.04■□□□□ 0.48
COMMD4-210ENST00000564587 TOP1P11387 765 aaKnown RBP18.04■□□□□ 0.48
COMMD4-210ENST00000564587 RPS12P25398 132 aaKnown RBP18.04■□□□□ 0.48
COMMD4-210ENST00000564587 NOVP48745 357 aa18.04■□□□□ 0.48
COMMD4-210ENST00000564587 DLGAP5Q15398 846 aa18.04■□□□□ 0.48
COMMD4-210ENST00000564587 SAFBQ15424 915 aaKnown RBP eCLIP18.04■□□□□ 0.48
COMMD4-210ENST00000564587 TMTC3Q6ZXV5 915 aa18.04■□□□□ 0.48
COMMD4-210ENST00000564587 NBPF11Q86T75 865 aa18.04■□□□□ 0.48
COMMD4-210ENST00000564587 KLHL34Q8N239 644 aa18.04■□□□□ 0.48
COMMD4-210ENST00000564587 SLC44A5Q8NCS7 719 aa18.04■□□□□ 0.48
COMMD4-210ENST00000564587 PNMA1Q8ND90 353 aa18.04■□□□□ 0.48
COMMD4-210ENST00000564587 PHKBQ93100 1093 aa18.04■□□□□ 0.48
COMMD4-210ENST00000564587 BCS1LQ9Y276 419 aa18.04■□□□□ 0.48
COMMD4-210ENST00000564587 NMT2O60551 498 aa18.03■□□□□ 0.48
COMMD4-210ENST00000564587 FKBP1CQ5VVH2 108 aa18.03■□□□□ 0.48
COMMD4-210ENST00000564587 KRT40Q6A162 431 aa18.03■□□□□ 0.48
COMMD4-210ENST00000564587 TRIM34Q9BYJ4 488 aa18.03■□□□□ 0.48
COMMD4-210ENST00000564587 MYH8P13535 1937 aa18.03■□□□□ 0.48
COMMD4-210ENST00000564587 ARFGEF1Q9Y6D6 1849 aa18.02■□□□□ 0.48
COMMD4-210ENST00000564587 ADAMTSL1Q8N6G6 1762 aa18.02■□□□□ 0.48
COMMD4-210ENST00000564587 SPDYE2BA6NHP3 402 aa18.02■□□□□ 0.48
COMMD4-210ENST00000564587 SPDYE6P0CI01 402 aa18.02■□□□□ 0.48
COMMD4-210ENST00000564587 GRM4Q14833 912 aa18.02■□□□□ 0.48
COMMD4-210ENST00000564587 FAM177A1Q8N128 213 aaPredicted RBP18.02■□□□□ 0.48
COMMD4-210ENST00000564587 SPATA32Q96LK8 384 aa18.02■□□□□ 0.48
COMMD4-210ENST00000564587 STX8Q9UNK0 236 aa18.02■□□□□ 0.48
COMMD4-210ENST00000564587 ATRNL1Q5VV63 1379 aa18.02■□□□□ 0.47
COMMD4-210ENST00000564587 MYH15Q9Y2K3 1946 aa18.02■□□□□ 0.47
COMMD4-210ENST00000564587 NFKBIEO00221 500 aa18.01■□□□□ 0.47
COMMD4-210ENST00000564587 MYO1BO43795 1136 aa18.01■□□□□ 0.47
COMMD4-210ENST00000564587 SMARCA1P28370 1054 aa18.01■□□□□ 0.47
COMMD4-210ENST00000564587 FOSBP53539 338 aa18.01■□□□□ 0.47
COMMD4-210ENST00000564587 GUCY1B3Q02153 619 aa18.01■□□□□ 0.47
COMMD4-210ENST00000564587 CXCL9Q07325 125 aa18.01■□□□□ 0.47
COMMD4-210ENST00000564587 FUT2Q10981 343 aa18.01■□□□□ 0.47
COMMD4-210ENST00000564587 NFIAQ12857 509 aa18.01■□□□□ 0.47
COMMD4-210ENST00000564587 GNL2Q13823 731 aaKnown RBP18.01■□□□□ 0.47
COMMD4-210ENST00000564587 GPT2Q8TD30 523 aa18.01■□□□□ 0.47
COMMD4-210ENST00000564587 CHAMP1Q96JM3 812 aa18.01■□□□□ 0.47
COMMD4-210ENST00000564587 TMEM47Q9BQJ4 181 aa18.01■□□□□ 0.47
COMMD4-210ENST00000564587 GDPD2Q9HCC8 539 aa18.01■□□□□ 0.47
COMMD4-210ENST00000564587 FAM198AQ9UFP1 575 aa18.01■□□□□ 0.47
COMMD4-210ENST00000564587 MYH6P13533 1939 aa18.01■□□□□ 0.47
COMMD4-210ENST00000564587 GOLGA6L4A6NEF3 574 aa18■□□□□ 0.47
COMMD4-210ENST00000564587 PPFIA3O75145 1194 aa18■□□□□ 0.47
COMMD4-210ENST00000564587 KIF23Q02241 960 aaPredicted RBP18■□□□□ 0.47
COMMD4-210ENST00000564587 METTL16Q86W50 562 aaKnown RBP18■□□□□ 0.47
COMMD4-210ENST00000564587 ZSCAN29Q8IWY8 852 aaPredicted RBP18■□□□□ 0.47
COMMD4-210ENST00000564587 LEO1Q8WVC0 666 aaPredicted RBP18■□□□□ 0.47
COMMD4-210ENST00000564587 PRMT6Q96LA8 375 aaPredicted RBP18■□□□□ 0.47
COMMD4-210ENST00000564587 FHDC1Q9C0D6 1143 aaPredicted RBP18■□□□□ 0.47
COMMD4-210ENST00000564587 TDRD3Q9H7E2 651 aaKnown RBP18■□□□□ 0.47
COMMD4-210ENST00000564587 RCOR1Q9UKL0 485 aa18■□□□□ 0.47
COMMD4-210ENST00000564587 COL4A5P29400 1685 aa17.99■□□□□ 0.47
COMMD4-210ENST00000564587 IGKV6D-41A0A0C4DH26 115 aa17.99■□□□□ 0.47
COMMD4-210ENST00000564587 U2AF2P26368 475 aaKnown RBP eCLIP17.99■□□□□ 0.47
COMMD4-210ENST00000564587 SHMT1P34896 483 aa17.99■□□□□ 0.47
COMMD4-210ENST00000564587 EIF6P56537 245 aaKnown RBP17.99■□□□□ 0.47
COMMD4-210ENST00000564587 SYT17Q9BSW7 474 aa17.99■□□□□ 0.47
COMMD4-210ENST00000564587 GZF1Q9H116 711 aaPredicted RBP17.99■□□□□ 0.47
COMMD4-210ENST00000564587 FOXP1Q9H334 677 aaPredicted RBP17.99■□□□□ 0.47
COMMD4-210ENST00000564587 MTMR4Q9NYA4 1195 aa17.99■□□□□ 0.47
COMMD4-210ENST00000564587 RTEL1Q9NZ71 1219 aa17.99■□□□□ 0.47
COMMD4-210ENST00000564587 HERC5Q9UII4 1024 aaKnown RBP17.99■□□□□ 0.47
COMMD4-210ENST00000564587 LETM1O95202 739 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-210ENST00000564587 TTLL1O95922 423 aa17.98■□□□□ 0.47
COMMD4-210ENST00000564587 MMP1P03956 469 aa17.98■□□□□ 0.47
COMMD4-210ENST00000564587 TCP10Q12799 353 aa17.98■□□□□ 0.47
COMMD4-210ENST00000564587 SPDYE2Q495Y8 402 aa17.98■□□□□ 0.47
COMMD4-210ENST00000564587 MYSM1Q5VVJ2 828 aa17.98■□□□□ 0.47
COMMD4-210ENST00000564587 CAVIN1Q6NZI2 390 aaKnown RBP17.98■□□□□ 0.47
COMMD4-210ENST00000564587 FAM173BQ6P4H8 233 aa17.98■□□□□ 0.47
COMMD4-210ENST00000564587 FAM151AQ8WW52 585 aa17.98■□□□□ 0.47
COMMD4-210ENST00000564587 CEP95Q96GE4 821 aa17.98■□□□□ 0.47
COMMD4-210ENST00000564587 BRMS1Q9HCU9 246 aa17.98■□□□□ 0.47
COMMD4-210ENST00000564587 TFIP11Q9UBB9 837 aaKnown RBP17.98■□□□□ 0.47
COMMD4-210ENST00000564587 ZNF70Q9UC06 446 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-210ENST00000564587 CNTNAP5Q8WYK1 1306 aa17.98■□□□□ 0.47
COMMD4-210ENST00000564587 PALM3A6NDB9 673 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-210ENST00000564587 PLEKHA8P1O95397 391 aa17.97■□□□□ 0.47
COMMD4-210ENST00000564587 YEATS4O95619 227 aa17.97■□□□□ 0.47
COMMD4-210ENST00000564587 PARP1P09874 1014 aaKnown RBP17.97■□□□□ 0.47
COMMD4-210ENST00000564587 AKR1B1P15121 316 aa17.97■□□□□ 0.47
COMMD4-210ENST00000564587 OTUD7BQ6GQQ9 843 aa17.97■□□□□ 0.47
COMMD4-210ENST00000564587 TATDN1Q6P1N9 297 aa17.97■□□□□ 0.47
COMMD4-210ENST00000564587 FAM83AQ86UY5 434 aa17.97■□□□□ 0.47
COMMD4-210ENST00000564587 CCDC82Q8N4S0 544 aa17.97■□□□□ 0.47
COMMD4-210ENST00000564587 SRBD1Q8N5C6 995 aaKnown RBP17.97■□□□□ 0.47
COMMD4-210ENST00000564587 DPF2Q92785 391 aa17.97■□□□□ 0.47
COMMD4-210ENST00000564587 AIFM3Q96NN9 605 aa17.97■□□□□ 0.47
COMMD4-210ENST00000564587 SH3GLB2Q9NR46 395 aa17.97■□□□□ 0.47
COMMD4-210ENST00000564587 POLR3EQ9NVU0 708 aa17.97■□□□□ 0.47
COMMD4-210ENST00000564587 PCDHAC2Q9Y5I4 1007 aa17.97■□□□□ 0.47
COMMD4-210ENST00000564587 V9GY48 417 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-210ENST00000564587 DDTLA6NHG4 134 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-210ENST00000564587 GADD45BO75293 160 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms