RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 ZNF711Q9Y462 761 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 SUPT6HQ7KZ85 1726 aaKnown RBP6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 STXBP3O00186 592 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 TTI1O43156 1089 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 SKIP12755 728 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 RPL13P26373 211 aaKnown RBP6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 TCEAL1Q15170 157 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 ODR4Q5SWX8 454 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 NBPF14Q5TI25 921 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 LRRC31Q6UY01 552 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 TXNDC2Q86VQ3 553 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 ASIC4Q96FT7 647 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 TMEM87BQ96K49 555 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 SPO11Q9Y5K1 396 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 KIAA1107Q9UPP5 1409 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 EPS15P42566 896 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 GCLCP48506 637 aaPredicted RBP6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 PABPC4Q13310 644 aaKnown RBP eCLIP6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 FAM117BQ6P1L5 589 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 GALNT6Q8NCL4 622 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 BRSK1Q8TDC3 778 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 ZNF75CPQ92670 426 aaPredicted RBP6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 CARD11Q9BXL7 1154 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 EIF2AQ9BY44 585 aaKnown RBP6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 PDRG1Q9NUG6 133 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 TRPC6Q9Y210 931 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 ZC3H13Q5T200 1668 aaKnown RBP6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 A0A0B4J203 849 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 ATP5DP30049 168 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 TCF7P36402 384 aaPredicted RBP6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 SKOR1P84550 965 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 FIP1L1Q6UN15 594 aaKnown RBP6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 CFAP36Q96G28 342 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 POM121Q96HA1 1249 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 PARD6BQ9BYG5 372 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 PCDH12Q9NPG4 1184 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 CLIC5Q9NZA1 410 aa6.64□□□□□ -1.35
TUBGCP4-207ENST00000563963 EIF3AQ14152 1382 aaKnown RBP6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 M0R2C6 588 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 TBX3O15119 743 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 MBD4O95243 580 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 FESP07332 822 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 GPTP24298 496 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 GEMIN4P57678 1058 aaKnown RBP6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 LBRQ14739 615 aaKnown RBP6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 CWF19L1Q69YN2 538 aaKnown RBP6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 GAS2L3Q86XJ1 694 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 SPATA17Q96L03 361 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 MRPL46Q9H2W6 279 aaKnown RBP6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 PLSCR2Q9NRY7 297 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 TPCN1Q9ULQ1 816 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 DAAM1Q9Y4D1 1078 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 DEPDC5O75140 1603 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 PDLIM1O00151 329 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 ZBED4O75132 1171 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 GYS1P13807 737 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 PSMA3P25788 255 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 CCT6AP40227 531 aaKnown RBP6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 CCT8P50990 548 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 TMCO3Q6UWJ1 677 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 RNF10Q8N5U6 811 aaKnown RBP6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 ARHGAP45Q92619 1136 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 NR1H4Q96RI1 486 aaPredicted RBP6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 CCT7Q99832 543 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 CCDC113Q9H0I3 377 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 FANCFQ9NPI8 374 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 KDRP35968 1356 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 MYO3AQ8NEV4 1616 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 COL6A1P12109 1028 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 ACAP1Q15027 740 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 WHAMMP3Q1A5X7 153 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 SPDYCQ5MJ68 293 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 TRIML2Q8N7C3 387 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 SPOCK2Q92563 424 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 TSC22D3Q99576 134 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 DDX56Q9NY93 547 aaKnown RBP6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 SQORQ9Y6N5 450 aa6.63□□□□□ -1.35
TUBGCP4-207ENST00000563963 ABCA6Q8N139 1617 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 TSPAN7P41732 249 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 PPM1FP49593 454 aaPredicted RBP6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 SCNN1BP51168 640 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 SMUG1Q53HV7 270 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 RASGRP2Q7LDG7 609 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 TCF7L2Q9NQB0 619 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 PRKAB1Q9Y478 270 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 SLC30A1Q9Y6M5 507 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 CYTH3O43739 400 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 ONECUT3O60422 494 aaPredicted RBP6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 ENDOUP21128 410 aaKnown RBP6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 RFX1P22670 979 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 CHMLP26374 656 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 HOXD11P31277 338 aaPredicted RBP6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 MXI1P50539 228 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 TNNI3KQ59H18 835 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 UNC5DQ6UXZ4 953 aa6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.62□□□□□ -1.35
TUBGCP4-207ENST00000563963 ATPIF1Q9UII2 106 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms