RNA–Protein interactions for RNA: ENST00000563888.6

TCF4-221, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-221ENST00000563888 TNFRSF10AO00220 468 aa9.41□□□□□ -0.9
TCF4-221ENST00000563888 SIAH2O43255 324 aa9.41□□□□□ -0.9
TCF4-221ENST00000563888 GFRA3O60609 400 aa9.41□□□□□ -0.9
TCF4-221ENST00000563888 HSPA5P11021 654 aaKnown RBP9.41□□□□□ -0.9
TCF4-221ENST00000563888 GRM5P41594 1212 aa9.41□□□□□ -0.9
TCF4-221ENST00000563888 FOXC1Q12948 553 aa9.41□□□□□ -0.9
TCF4-221ENST00000563888 ZNF697Q5TEC3 545 aa9.41□□□□□ -0.9
TCF4-221ENST00000563888 Q6ZNB5 142 aa9.41□□□□□ -0.9
TCF4-221ENST00000563888 NECAB2Q7Z6G3 386 aa9.41□□□□□ -0.9
TCF4-221ENST00000563888 CCDC116Q8IYX3 515 aa9.41□□□□□ -0.9
TCF4-221ENST00000563888 SIX5Q8N196 739 aa9.41□□□□□ -0.9
TCF4-221ENST00000563888 DIS3LQ8TF46 1054 aaKnown RBP9.41□□□□□ -0.9
TCF4-221ENST00000563888 ZBED3Q96IU2 234 aaPredicted RBP9.41□□□□□ -0.9
TCF4-221ENST00000563888 HINFPQ9BQA5 517 aa9.41□□□□□ -0.9
TCF4-221ENST00000563888 GZF1Q9H116 711 aaPredicted RBP9.41□□□□□ -0.9
TCF4-221ENST00000563888 PCDHGA11Q9Y5H2 935 aa9.41□□□□□ -0.9
TCF4-221ENST00000563888 PPP2R3BQ9Y5P8 575 aa9.41□□□□□ -0.9
TCF4-221ENST00000563888 WASF2Q9Y6W5 498 aa9.41□□□□□ -0.9
TCF4-221ENST00000563888 KDM3BQ7LBC6 1761 aa9.41□□□□□ -0.9
TCF4-221ENST00000563888 LRRC37AA6NMS7 1700 aa9.4□□□□□ -0.9
TCF4-221ENST00000563888 F8W031 263 aaPredicted RBP9.4□□□□□ -0.9
TCF4-221ENST00000563888 MYO1BO43795 1136 aa9.4□□□□□ -0.9
TCF4-221ENST00000563888 PRKCZQ05513 592 aa9.4□□□□□ -0.9
TCF4-221ENST00000563888 RASA3Q14644 834 aa9.4□□□□□ -0.9
TCF4-221ENST00000563888 SWI5Q1ZZU3 235 aa9.4□□□□□ -0.9
TCF4-221ENST00000563888 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.4□□□□□ -0.9
TCF4-221ENST00000563888 ZNF598Q86UK7 904 aaKnown RBP9.4□□□□□ -0.9
TCF4-221ENST00000563888 EMID1Q96A84 441 aaPredicted RBP9.4□□□□□ -0.9
TCF4-221ENST00000563888 CDX2Q99626 313 aaPredicted RBP9.4□□□□□ -0.9
TCF4-221ENST00000563888 CYLDQ9NQC7 956 aa9.4□□□□□ -0.9
TCF4-221ENST00000563888 TMPRSS4Q9NRS4 437 aa9.4□□□□□ -0.9
TCF4-221ENST00000563888 PGPEP1Q9NXJ5 209 aa9.4□□□□□ -0.9
TCF4-221ENST00000563888 KIAA1024Q9UPX6 916 aa9.4□□□□□ -0.9
TCF4-221ENST00000563888 NUDCQ9Y266 331 aa9.4□□□□□ -0.9
TCF4-221ENST00000563888 LAMB2P55268 1798 aa9.4□□□□□ -0.91
TCF4-221ENST00000563888 ANKRD36CQ5JPF3 1778 aa9.4□□□□□ -0.91
TCF4-221ENST00000563888 SFI1A8K8P3 1242 aa9.39□□□□□ -0.91
TCF4-221ENST00000563888 CETPP11597 493 aa9.39□□□□□ -0.91
TCF4-221ENST00000563888 ELNP15502 786 aa9.39□□□□□ -0.91
TCF4-221ENST00000563888 MMP14P50281 582 aa9.39□□□□□ -0.91
TCF4-221ENST00000563888 MAP3K12Q12852 859 aa9.39□□□□□ -0.91
TCF4-221ENST00000563888 VGLL4Q14135 290 aa9.39□□□□□ -0.91
TCF4-221ENST00000563888 C17orf99Q6UX52 265 aa9.39□□□□□ -0.91
TCF4-221ENST00000563888 ANKRD18AQ8IVF6 992 aa9.39□□□□□ -0.91
TCF4-221ENST00000563888 JARID2Q92833 1246 aaPredicted RBP9.39□□□□□ -0.91
TCF4-221ENST00000563888 PRMT6Q96LA8 375 aaPredicted RBP9.39□□□□□ -0.91
TCF4-221ENST00000563888 CFAP53Q96M91 514 aa9.39□□□□□ -0.91
TCF4-221ENST00000563888 CSADQ9Y600 493 aa9.39□□□□□ -0.91
TCF4-221ENST00000563888 COL3A1P02461 1466 aaPredicted RBP9.39□□□□□ -0.91
TCF4-221ENST00000563888 ZNF804BA4D1E1 1349 aa9.38□□□□□ -0.91
TCF4-221ENST00000563888 AOX1Q06278 1338 aa9.38□□□□□ -0.91
TCF4-221ENST00000563888 ADCY3O60266 1144 aa9.38□□□□□ -0.91
TCF4-221ENST00000563888 INHAP05111 366 aa9.38□□□□□ -0.91
TCF4-221ENST00000563888 SCTRP47872 440 aa9.38□□□□□ -0.91
TCF4-221ENST00000563888 RBM5P52756 815 aaKnown RBP eCLIP9.38□□□□□ -0.91
TCF4-221ENST00000563888 ERVK-9P63128 1117 aa9.38□□□□□ -0.91
TCF4-221ENST00000563888 CFAP100Q494V2 611 aa9.38□□□□□ -0.91
TCF4-221ENST00000563888 CCDC152Q4G0S7 254 aa9.38□□□□□ -0.91
TCF4-221ENST00000563888 PPP1R26Q5T8A7 1209 aaPredicted RBP9.38□□□□□ -0.91
TCF4-221ENST00000563888 FAM109BQ6ICB4 259 aaPredicted RBP9.38□□□□□ -0.91
TCF4-221ENST00000563888 TXNRD3Q86VQ6 643 aa9.38□□□□□ -0.91
TCF4-221ENST00000563888 CLP1Q92989 425 aaKnown RBP9.38□□□□□ -0.91
TCF4-221ENST00000563888 ISCA1Q9BUE6 129 aa9.38□□□□□ -0.91
TCF4-221ENST00000563888 COA1Q9GZY4 146 aa9.38□□□□□ -0.91
TCF4-221ENST00000563888 TSPYL4Q9UJ04 414 aa9.38□□□□□ -0.91
TCF4-221ENST00000563888 GABRQQ9UN88 632 aa9.38□□□□□ -0.91
TCF4-221ENST00000563888 DDX60Q8IY21 1712 aaKnown RBP9.38□□□□□ -0.91
TCF4-221ENST00000563888 COL1A1P02452 1464 aaPredicted RBP9.38□□□□□ -0.91
TCF4-221ENST00000563888 CCER1Q8TC90 406 aaPredicted RBP9.37□□□□□ -0.91
TCF4-221ENST00000563888 MYLIPQ8WY64 445 aa9.37□□□□□ -0.91
TCF4-221ENST00000563888 ZSWIM8A7E2V4 1837 aa9.37□□□□□ -0.91
TCF4-221ENST00000563888 DNAH12Q6ZR08 3092 aa9.37□□□□□ -0.91
TCF4-221ENST00000563888 CDH23Q9H251 3354 aa9.36□□□□□ -0.91
TCF4-221ENST00000563888 TTC24A2A3L6 582 aaPredicted RBP9.36□□□□□ -0.91
TCF4-221ENST00000563888 NRG2O14511 850 aaPredicted RBP9.36□□□□□ -0.91
TCF4-221ENST00000563888 KLRK1P26718 216 aa9.36□□□□□ -0.91
TCF4-221ENST00000563888 CCT4P50991 539 aaKnown RBP9.36□□□□□ -0.91
TCF4-221ENST00000563888 FCGRTP55899 365 aa9.36□□□□□ -0.91
TCF4-221ENST00000563888 SNAPC2Q13487 334 aa9.36□□□□□ -0.91
TCF4-221ENST00000563888 MINPP1Q9UNW1 487 aa9.36□□□□□ -0.91
TCF4-221ENST00000563888 LAMB4A4D0S4 1761 aa9.36□□□□□ -0.91
TCF4-221ENST00000563888 MED23Q9ULK4 1368 aa9.36□□□□□ -0.91
TCF4-221ENST00000563888 PDHXO00330 501 aa9.35□□□□□ -0.91
TCF4-221ENST00000563888 BACH1O14867 736 aa9.35□□□□□ -0.91
TCF4-221ENST00000563888 TMCO4Q5TGY1 634 aa9.35□□□□□ -0.91
TCF4-221ENST00000563888 CYP2U1Q7Z449 544 aa9.35□□□□□ -0.91
TCF4-221ENST00000563888 CERS5Q8N5B7 392 aa9.35□□□□□ -0.91
TCF4-221ENST00000563888 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.35□□□□□ -0.91
TCF4-221ENST00000563888 PLBD2Q8NHP8 589 aa9.35□□□□□ -0.91
TCF4-221ENST00000563888 SNIP1Q8TAD8 396 aaKnown RBP9.35□□□□□ -0.91
TCF4-221ENST00000563888 ZKSCAN4Q969J2 545 aaPredicted RBP9.35□□□□□ -0.91
TCF4-221ENST00000563888 SEMA6BQ9H3T3 888 aa9.35□□□□□ -0.91
TCF4-221ENST00000563888 ZCCHC17Q9NP64 241 aaKnown RBP9.35□□□□□ -0.91
TCF4-221ENST00000563888 JAG2Q9Y219 1238 aa9.35□□□□□ -0.91
TCF4-221ENST00000563888 IVNS1ABPQ9Y6Y0 642 aa9.35□□□□□ -0.91
TCF4-221ENST00000563888 TCP10L2B9ZVM9 353 aa9.34□□□□□ -0.91
TCF4-221ENST00000563888 PRMT3O60678 531 aa9.34□□□□□ -0.91
TCF4-221ENST00000563888 NEFMP07197 916 aa9.34□□□□□ -0.91
TCF4-221ENST00000563888 HSP90B1P14625 803 aaKnown RBP9.34□□□□□ -0.91
TCF4-221ENST00000563888 FOSL2P15408 326 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms