RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 PRKAR2BP31323 418 aa13.96□□□□□ -0.17
HDGFL3-204ENST00000563790 MFSD14BQ5SR56 506 aa13.96□□□□□ -0.17
HDGFL3-204ENST00000563790 NEK9Q8TD19 979 aa13.96□□□□□ -0.17
HDGFL3-204ENST00000563790 ARNTL2Q8WYA1 636 aa13.96□□□□□ -0.17
HDGFL3-204ENST00000563790 ANKRD2Q9GZV1 360 aa13.96□□□□□ -0.17
HDGFL3-204ENST00000563790 TEP1Q99973 2627 aaKnown RBP13.96□□□□□ -0.17
HDGFL3-204ENST00000563790 LOC400499M0QZD8 3231 aa13.96□□□□□ -0.18
HDGFL3-204ENST00000563790 PTPRSQ13332 1948 aa13.96□□□□□ -0.18
HDGFL3-204ENST00000563790 TRIM75PA6NK02 468 aa13.95□□□□□ -0.18
HDGFL3-204ENST00000563790 GALR2O43603 387 aaPredicted RBP13.95□□□□□ -0.18
HDGFL3-204ENST00000563790 FGBP02675 491 aa13.95□□□□□ -0.18
HDGFL3-204ENST00000563790 MYCNP04198 464 aaPredicted RBP13.95□□□□□ -0.18
HDGFL3-204ENST00000563790 PABPC4Q13310 644 aaKnown RBP eCLIP13.95□□□□□ -0.18
HDGFL3-204ENST00000563790 TMEM67Q5HYA8 995 aa13.95□□□□□ -0.18
HDGFL3-204ENST00000563790 GPR142Q7Z601 462 aa13.95□□□□□ -0.18
HDGFL3-204ENST00000563790 FRMD5Q7Z6J6 570 aa13.95□□□□□ -0.18
HDGFL3-204ENST00000563790 FAM50BQ9Y247 325 aa13.95□□□□□ -0.18
HDGFL3-204ENST00000563790 RALGAPA2Q2PPJ7 1873 aa13.95□□□□□ -0.18
HDGFL3-204ENST00000563790 ZNF462Q96JM2 2506 aa13.94□□□□□ -0.18
HDGFL3-204ENST00000563790 KDM4AO75164 1064 aa13.94□□□□□ -0.18
HDGFL3-204ENST00000563790 IGHA2P01877 340 aa13.94□□□□□ -0.18
HDGFL3-204ENST00000563790 NBPF20Q3BBV1 942 aa13.94□□□□□ -0.18
HDGFL3-204ENST00000563790 ZNF804AQ7Z570 1209 aa13.94□□□□□ -0.18
HDGFL3-204ENST00000563790 RNF135Q8IUD6 432 aa13.94□□□□□ -0.18
HDGFL3-204ENST00000563790 EDC3Q96F86 508 aaKnown RBP13.94□□□□□ -0.18
HDGFL3-204ENST00000563790 RSPH6AQ9H0K4 717 aa13.94□□□□□ -0.18
HDGFL3-204ENST00000563790 SLC4A7Q9Y6M7 1214 aa13.94□□□□□ -0.18
HDGFL3-204ENST00000563790 PHF20L1A8MW92 1017 aa13.93□□□□□ -0.18
HDGFL3-204ENST00000563790 APBB1O00213 710 aa13.93□□□□□ -0.18
HDGFL3-204ENST00000563790 CYP2C19P33261 490 aa13.93□□□□□ -0.18
HDGFL3-204ENST00000563790 KCNJ4P48050 445 aa13.93□□□□□ -0.18
HDGFL3-204ENST00000563790 HDLBPQ00341 1268 aaKnown RBP13.93□□□□□ -0.18
HDGFL3-204ENST00000563790 ANO1Q5XXA6 986 aa13.93□□□□□ -0.18
HDGFL3-204ENST00000563790 PLEKHH3Q7Z736 793 aa13.93□□□□□ -0.18
HDGFL3-204ENST00000563790 GPRC5AQ8NFJ5 357 aa13.93□□□□□ -0.18
HDGFL3-204ENST00000563790 PANK3Q9H999 370 aa13.93□□□□□ -0.18
HDGFL3-204ENST00000563790 IGSF10Q6WRI0 2623 aa13.93□□□□□ -0.18
HDGFL3-204ENST00000563790 A0A1W2PQ45 241 aaPredicted RBP13.92□□□□□ -0.18
HDGFL3-204ENST00000563790 A0A1W2PQY0 241 aa13.92□□□□□ -0.18
HDGFL3-204ENST00000563790 TAP1Q03518 808 aa13.92□□□□□ -0.18
HDGFL3-204ENST00000563790 OTOP2Q7RTS6 562 aa13.92□□□□□ -0.18
HDGFL3-204ENST00000563790 FAM151AQ8WW52 585 aa13.92□□□□□ -0.18
HDGFL3-204ENST00000563790 CHAMP1Q96JM3 812 aa13.92□□□□□ -0.18
HDGFL3-204ENST00000563790 PORCNQ9H237 461 aa13.92□□□□□ -0.18
HDGFL3-204ENST00000563790 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.92□□□□□ -0.18
HDGFL3-204ENST00000563790 DBF4Q9UBU7 674 aaPredicted RBP13.92□□□□□ -0.18
HDGFL3-204ENST00000563790 FANCMQ8IYD8 2048 aa13.91□□□□□ -0.18
HDGFL3-204ENST00000563790 SEPT4O43236 478 aa13.91□□□□□ -0.18
HDGFL3-204ENST00000563790 HOXC6P09630 235 aa13.91□□□□□ -0.18
HDGFL3-204ENST00000563790 ATP2A2P16615 1042 aaKnown RBP13.91□□□□□ -0.18
HDGFL3-204ENST00000563790 ATP2B2Q01814 1243 aa13.91□□□□□ -0.18
HDGFL3-204ENST00000563790 TXNRD2Q9NNW7 524 aa13.91□□□□□ -0.18
HDGFL3-204ENST00000563790 SCN5AQ14524 2016 aa13.91□□□□□ -0.18
HDGFL3-204ENST00000563790 PEX10O60683 326 aa13.9□□□□□ -0.18
HDGFL3-204ENST00000563790 PCCAP05165 728 aaPredicted RBP13.9□□□□□ -0.18
HDGFL3-204ENST00000563790 LURAP1LQ8IV03 231 aa13.9□□□□□ -0.18
HDGFL3-204ENST00000563790 KIAA2013Q8IYS2 634 aa13.9□□□□□ -0.18
HDGFL3-204ENST00000563790 POP1Q99575 1024 aaKnown RBP13.9□□□□□ -0.18
HDGFL3-204ENST00000563790 MYO10Q9HD67 2058 aa13.89□□□□□ -0.19
HDGFL3-204ENST00000563790 ARHGEF15O94989 841 aa13.89□□□□□ -0.19
HDGFL3-204ENST00000563790 CTSWP56202 376 aa13.89□□□□□ -0.19
HDGFL3-204ENST00000563790 ZXDAP98168 799 aa13.89□□□□□ -0.19
HDGFL3-204ENST00000563790 FAM47AQ5JRC9 791 aa13.89□□□□□ -0.19
HDGFL3-204ENST00000563790 CCAR1Q8IX12 1150 aaKnown RBP13.89□□□□□ -0.19
HDGFL3-204ENST00000563790 ZDHHC15Q96MV8 337 aa13.89□□□□□ -0.19
HDGFL3-204ENST00000563790 GREM2Q9H772 168 aa13.89□□□□□ -0.19
HDGFL3-204ENST00000563790 CDK5RAP2Q96SN8 1893 aa13.89□□□□□ -0.19
HDGFL3-204ENST00000563790 H3BQ06 376 aaPredicted RBP13.88□□□□□ -0.19
HDGFL3-204ENST00000563790 SNAP23O00161 211 aa13.88□□□□□ -0.19
HDGFL3-204ENST00000563790 APOBEC3HQ6NTF7 200 aaKnown RBP13.88□□□□□ -0.19
HDGFL3-204ENST00000563790 TTLL11Q8NHH1 800 aa13.88□□□□□ -0.19
HDGFL3-204ENST00000563790 TEKT1Q969V4 418 aa13.88□□□□□ -0.19
HDGFL3-204ENST00000563790 ATG2AQ2TAZ0 1938 aa13.88□□□□□ -0.19
HDGFL3-204ENST00000563790 TENM4Q6N022 2769 aa13.88□□□□□ -0.19
HDGFL3-204ENST00000563790 TET1Q8NFU7 2136 aa13.87□□□□□ -0.19
HDGFL3-204ENST00000563790 DMXL2Q8TDJ6 3036 aa13.87□□□□□ -0.19
HDGFL3-204ENST00000563790 ZIC2O95409 532 aaPredicted RBP13.87□□□□□ -0.19
HDGFL3-204ENST00000563790 IGHMBP2P38935 993 aaKnown RBP13.87□□□□□ -0.19
HDGFL3-204ENST00000563790 ERVK-9P63128 1117 aa13.87□□□□□ -0.19
HDGFL3-204ENST00000563790 ERVK-24P63145 666 aa13.87□□□□□ -0.19
HDGFL3-204ENST00000563790 RBPJLQ9UBG7 517 aa13.87□□□□□ -0.19
HDGFL3-204ENST00000563790 MYH13Q9UKX3 1938 aa13.87□□□□□ -0.19
HDGFL3-204ENST00000563790 MROH7Q68CQ1 1323 aa13.87□□□□□ -0.19
HDGFL3-204ENST00000563790 CHRNDQ07001 517 aa13.86□□□□□ -0.19
HDGFL3-204ENST00000563790 Q3C1V9 767 aa13.86□□□□□ -0.19
HDGFL3-204ENST00000563790 GDPD5Q8WTR4 605 aa13.86□□□□□ -0.19
HDGFL3-204ENST00000563790 ASIC4Q96FT7 647 aa13.86□□□□□ -0.19
HDGFL3-204ENST00000563790 PPP1R12CQ9BZL4 782 aa13.86□□□□□ -0.19
HDGFL3-204ENST00000563790 PTPN13Q12923 2485 aa13.86□□□□□ -0.19
HDGFL3-204ENST00000563790 GLRX3O76003 335 aaKnown RBP13.85□□□□□ -0.19
HDGFL3-204ENST00000563790 HERVK_113P62684 666 aa13.85□□□□□ -0.19
HDGFL3-204ENST00000563790 SIGLEC14Q08ET2 396 aa13.85□□□□□ -0.19
HDGFL3-204ENST00000563790 GRIK5Q16478 980 aa13.85□□□□□ -0.19
HDGFL3-204ENST00000563790 KIAA0319Q5VV43 1072 aa13.85□□□□□ -0.19
HDGFL3-204ENST00000563790 RNF180Q86T96 592 aa13.85□□□□□ -0.19
HDGFL3-204ENST00000563790 NPLOC4Q8TAT6 608 aa13.85□□□□□ -0.19
HDGFL3-204ENST00000563790 MRIQ9BWK5 157 aa13.85□□□□□ -0.19
HDGFL3-204ENST00000563790 SLC15A5A6NIM6 579 aa13.84□□□□□ -0.19
HDGFL3-204ENST00000563790 CTNND1O60716 968 aaKnown RBP13.84□□□□□ -0.19
HDGFL3-204ENST00000563790 CYP2C18P33260 490 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms