RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 GRIN3BO60391 1043 aa25.61■■□□□ 1.69
LINC01960-201ENST00000563759 DDNO94850 711 aaPredicted RBP25.61■■□□□ 1.69
LINC01960-201ENST00000563759 LARP1BQ659C4 914 aaKnown RBP25.61■■□□□ 1.69
LINC01960-201ENST00000563759 FANCBQ8NB91 859 aa25.61■■□□□ 1.69
LINC01960-201ENST00000563759 CEP95Q96GE4 821 aa25.61■■□□□ 1.69
LINC01960-201ENST00000563759 FOXD4L5Q5VV16 416 aaPredicted RBP25.6■■□□□ 1.69
LINC01960-201ENST00000563759 FOXD4L4Q8WXT5 416 aaPredicted RBP25.6■■□□□ 1.69
LINC01960-201ENST00000563759 CCDC17Q96LX7 622 aa25.6■■□□□ 1.69
LINC01960-201ENST00000563759 HERC5Q9UII4 1024 aaKnown RBP25.6■■□□□ 1.69
LINC01960-201ENST00000563759 BRD1O95696 1058 aa25.6■■□□□ 1.69
LINC01960-201ENST00000563759 LMOD1P29536 600 aaPredicted RBP25.6■■□□□ 1.69
LINC01960-201ENST00000563759 TROAPQ12815 778 aa25.6■■□□□ 1.69
LINC01960-201ENST00000563759 PPP2R5BQ15173 497 aa25.6■■□□□ 1.69
LINC01960-201ENST00000563759 CERKLQ49MI3 558 aaPredicted RBP25.6■■□□□ 1.69
LINC01960-201ENST00000563759 METTL16Q86W50 562 aaKnown RBP25.6■■□□□ 1.69
LINC01960-201ENST00000563759 PNMA1Q8ND90 353 aa25.6■■□□□ 1.69
LINC01960-201ENST00000563759 ANKS1AQ92625 1134 aa25.6■■□□□ 1.69
LINC01960-201ENST00000563759 ZDHHC9Q9Y397 364 aa25.6■■□□□ 1.69
LINC01960-201ENST00000563759 POLR2AP24928 1970 aaKnown RBP25.59■■□□□ 1.69
LINC01960-201ENST00000563759 VPS37CA5D8V6 355 aaPredicted RBP25.59■■□□□ 1.69
LINC01960-201ENST00000563759 XPO5Q9HAV4 1204 aaKnown RBP eCLIP25.59■■□□□ 1.69
LINC01960-201ENST00000563759 FAM217BQ9NTX9 383 aaPredicted RBP25.59■■□□□ 1.69
LINC01960-201ENST00000563759 HACL1Q9UJ83 578 aa25.59■■□□□ 1.69
LINC01960-201ENST00000563759 PDIA4P13667 645 aaKnown RBP25.58■■□□□ 1.69
LINC01960-201ENST00000563759 TATDN1Q6P1N9 297 aa25.58■■□□□ 1.69
LINC01960-201ENST00000563759 CTCFLQ8NI51 663 aaPredicted RBP25.58■■□□□ 1.69
LINC01960-201ENST00000563759 ASTN2O75129 1339 aaPredicted RBP25.58■■□□□ 1.69
LINC01960-201ENST00000563759 EPS15P42566 896 aa25.57■■□□□ 1.68
LINC01960-201ENST00000563759 RASA3Q14644 834 aa25.57■■□□□ 1.68
LINC01960-201ENST00000563759 TRPM4Q8TD43 1214 aa25.57■■□□□ 1.68
LINC01960-201ENST00000563759 TMEM47Q9BQJ4 181 aa25.57■■□□□ 1.68
LINC01960-201ENST00000563759 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.57■■□□□ 1.68
LINC01960-201ENST00000563759 RBM28Q9NW13 759 aaKnown RBP25.57■■□□□ 1.68
LINC01960-201ENST00000563759 ORC3Q9UBD5 711 aaPredicted RBP25.57■■□□□ 1.68
LINC01960-201ENST00000563759 SCAF8Q9UPN6 1271 aaKnown RBP25.57■■□□□ 1.68
LINC01960-201ENST00000563759 ATAD5Q96QE3 1844 aa25.57■■□□□ 1.68
LINC01960-201ENST00000563759 TCHHQ07283 1943 aa25.56■■□□□ 1.68
LINC01960-201ENST00000563759 CDAN1Q8IWY9 1227 aa25.56■■□□□ 1.68
LINC01960-201ENST00000563759 PHKBQ93100 1093 aa25.56■■□□□ 1.68
LINC01960-201ENST00000563759 MTMR4Q9NYA4 1195 aa25.56■■□□□ 1.68
LINC01960-201ENST00000563759 BAZ2BQ9UIF8 2168 aaKnown RBP25.56■■□□□ 1.68
LINC01960-201ENST00000563759 IGKV6D-41A0A0C4DH26 115 aa25.55■■□□□ 1.68
LINC01960-201ENST00000563759 ZSCAN22P10073 491 aaPredicted RBP25.55■■□□□ 1.68
LINC01960-201ENST00000563759 TOP1P11387 765 aaKnown RBP25.55■■□□□ 1.68
LINC01960-201ENST00000563759 IFNAR1P17181 557 aa25.55■■□□□ 1.68
LINC01960-201ENST00000563759 NTRK3Q16288 839 aa25.55■■□□□ 1.68
LINC01960-201ENST00000563759 DPY19L2Q6NUT2 758 aa25.55■■□□□ 1.68
LINC01960-201ENST00000563759 GBP4Q96PP9 640 aa25.55■■□□□ 1.68
LINC01960-201ENST00000563759 H3BQV1 296 aa25.55■■□□□ 1.68
LINC01960-201ENST00000563759 GDF11O95390 407 aa25.55■■□□□ 1.68
LINC01960-201ENST00000563759 FDPSP14324 419 aaKnown RBP25.55■■□□□ 1.68
LINC01960-201ENST00000563759 KIF5BP33176 963 aa25.55■■□□□ 1.68
LINC01960-201ENST00000563759 PPP4R3BQ5MIZ7 849 aa25.55■■□□□ 1.68
LINC01960-201ENST00000563759 IFFO2Q5TF58 517 aa25.55■■□□□ 1.68
LINC01960-201ENST00000563759 MTMR6Q9Y217 621 aa25.55■■□□□ 1.68
LINC01960-201ENST00000563759 TTLL1O95922 423 aa25.54■■□□□ 1.68
LINC01960-201ENST00000563759 ABCB5Q2M3G0 1257 aa25.54■■□□□ 1.68
LINC01960-201ENST00000563759 ANGEL2Q5VTE6 544 aaKnown RBP25.54■■□□□ 1.68
LINC01960-201ENST00000563759 CLEC10AQ8IUN9 316 aa25.54■■□□□ 1.68
LINC01960-201ENST00000563759 APOBEC3FQ8IUX4 373 aaKnown RBP25.54■■□□□ 1.68
LINC01960-201ENST00000563759 TRIM22Q8IYM9 498 aa25.54■■□□□ 1.68
LINC01960-201ENST00000563759 SLC26A6Q9BXS9 759 aa25.54■■□□□ 1.68
LINC01960-201ENST00000563759 MTMR7Q9Y216 660 aa25.54■■□□□ 1.68
LINC01960-201ENST00000563759 ZC3H4Q9UPT8 1303 aaKnown RBP25.54■■□□□ 1.68
LINC01960-201ENST00000563759 MYH15Q9Y2K3 1946 aa25.54■■□□□ 1.68
LINC01960-201ENST00000563759 NOVP48745 357 aa25.53■■□□□ 1.68
LINC01960-201ENST00000563759 FOSBP53539 338 aa25.53■■□□□ 1.68
LINC01960-201ENST00000563759 SSRP1Q08945 709 aaKnown RBP25.53■■□□□ 1.68
LINC01960-201ENST00000563759 NFKBIBQ15653 356 aa25.53■■□□□ 1.68
LINC01960-201ENST00000563759 STK36Q9NRP7 1315 aa25.53■■□□□ 1.68
LINC01960-201ENST00000563759 TMEM179Q6ZVK1 233 aa25.53■■□□□ 1.68
LINC01960-201ENST00000563759 CDC37L1Q7L3B6 337 aa25.53■■□□□ 1.68
LINC01960-201ENST00000563759 CMTR1Q8N1G2 835 aaKnown RBP25.53■■□□□ 1.68
LINC01960-201ENST00000563759 CCDC82Q8N4S0 544 aa25.53■■□□□ 1.68
LINC01960-201ENST00000563759 GGA3Q9NZ52 723 aa25.53■■□□□ 1.68
LINC01960-201ENST00000563759 MAP3K14Q99558 947 aa25.52■■□□□ 1.68
LINC01960-201ENST00000563759 DEFB129Q9H1M3 183 aa25.52■■□□□ 1.68
LINC01960-201ENST00000563759 ADARB2Q9NS39 739 aaKnown RBP25.52■■□□□ 1.68
LINC01960-201ENST00000563759 TBC1D12O60347 775 aa25.51■■□□□ 1.67
LINC01960-201ENST00000563759 FMNL1O95466 1100 aaPredicted RBP25.51■■□□□ 1.67
LINC01960-201ENST00000563759 F13A1P00488 732 aa25.51■■□□□ 1.67
LINC01960-201ENST00000563759 ATP2B2Q01814 1243 aa25.51■■□□□ 1.67
LINC01960-201ENST00000563759 TMTC3Q6ZXV5 915 aa25.51■■□□□ 1.67
LINC01960-201ENST00000563759 LRRC47Q8N1G4 583 aaKnown RBP25.51■■□□□ 1.67
LINC01960-201ENST00000563759 CABP5Q9NP86 173 aa25.51■■□□□ 1.67
LINC01960-201ENST00000563759 CLIP2Q9UDT6 1046 aa25.51■■□□□ 1.67
LINC01960-201ENST00000563759 PGAP2Q9UHJ9 254 aa25.51■■□□□ 1.67
LINC01960-201ENST00000563759 SCN4AP35499 1836 aa25.51■■□□□ 1.67
LINC01960-201ENST00000563759 PLEKHA8P1O95397 391 aa25.51■■□□□ 1.67
LINC01960-201ENST00000563759 GRM4Q14833 912 aa25.51■■□□□ 1.67
LINC01960-201ENST00000563759 SHROOM1Q2M3G4 852 aaPredicted RBP25.51■■□□□ 1.67
LINC01960-201ENST00000563759 MIGA2Q7L4E1 593 aa25.51■■□□□ 1.67
LINC01960-201ENST00000563759 KANSL2Q9H9L4 492 aa25.51■■□□□ 1.67
LINC01960-201ENST00000563759 C8orf76Q96K31 380 aa25.5■■□□□ 1.67
LINC01960-201ENST00000563759 TEPSINQ96N21 525 aa25.5■■□□□ 1.67
LINC01960-201ENST00000563759 GH2P01242 217 aa25.49■■□□□ 1.67
LINC01960-201ENST00000563759 HIRAP54198 1017 aaPredicted RBP25.49■■□□□ 1.67
LINC01960-201ENST00000563759 ICA1Q05084 483 aa25.49■■□□□ 1.67
LINC01960-201ENST00000563759 SEPT2Q15019 361 aa25.49■■□□□ 1.67
LINC01960-201ENST00000563759 NBPF11Q86T75 865 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms