RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 USP17L10C9JJH3 530 aa9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 CNGA1P29973 690 aa9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 ADORA1P30542 326 aa9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 MECOMQ03112 1051 aa9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 ADGRE1Q14246 886 aa9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 GRB14Q14449 540 aa9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 CCDC102BQ68D86 513 aa9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 SLF2Q8IX21 1173 aa9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 GTF3C2Q8WUA4 911 aaPredicted RBP9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 USP44Q9H0E7 712 aa9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 EMILIN3Q9NT22 766 aa9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 GNL3LQ9NVN8 582 aaKnown RBP9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 TMOD4Q9NZQ9 345 aa9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 HERC5Q9UII4 1024 aaKnown RBP9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 NDUFB9Q9Y6M9 179 aa9.63□□□□□ -0.87
HERPUD1-206ENST00000563343 KIAA0355O15063 1070 aa9.62□□□□□ -0.87
HERPUD1-206ENST00000563343 MAP4K4O95819 1239 aaPredicted RBP9.62□□□□□ -0.87
HERPUD1-206ENST00000563343 ASNSP08243 561 aa9.62□□□□□ -0.87
HERPUD1-206ENST00000563343 MRPS5P82675 430 aaKnown RBP9.62□□□□□ -0.87
HERPUD1-206ENST00000563343 TLE2Q04725 743 aa9.62□□□□□ -0.87
HERPUD1-206ENST00000563343 CCDC184Q52MB2 194 aa9.62□□□□□ -0.87
HERPUD1-206ENST00000563343 ANO1Q5XXA6 986 aa9.62□□□□□ -0.87
HERPUD1-206ENST00000563343 METTL16Q86W50 562 aaKnown RBP9.62□□□□□ -0.87
HERPUD1-206ENST00000563343 ARRDC4Q8NCT1 418 aa9.62□□□□□ -0.87
HERPUD1-206ENST00000563343 C12orf42Q96LP6 360 aa9.62□□□□□ -0.87
HERPUD1-206ENST00000563343 NECAB3Q96P71 396 aaPredicted RBP9.62□□□□□ -0.87
HERPUD1-206ENST00000563343 ABCF2Q9UG63 623 aa9.62□□□□□ -0.87
HERPUD1-206ENST00000563343 FBXO3Q9UK99 471 aa9.62□□□□□ -0.87
HERPUD1-206ENST00000563343 RABGAP1Q9Y3P9 1069 aa9.62□□□□□ -0.87
HERPUD1-206ENST00000563343 PIEZO1Q92508 2521 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 CIAO1O76071 339 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 BMP1P13497 986 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 PBX2P40425 430 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 ADCYAP1R1P41586 468 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 ATP2B2Q01814 1243 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 LRRC41Q15345 812 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 POTEHQ6S545 545 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 LBX2Q6XYB7 198 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 WDR63Q8IWG1 891 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 CCAR1Q8IX12 1150 aaKnown RBP9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 PPM1EQ8WY54 764 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 NSUN4Q96CB9 384 aaKnown RBP9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 TIFAQ96CG3 184 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 PRDM12Q9H4Q4 367 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 BTBD7Q9P203 1132 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 PI4KBQ9UBF8 816 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 TACC3Q9Y6A5 838 aa9.61□□□□□ -0.87
HERPUD1-206ENST00000563343 KBTBD13C9JR72 458 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 SEPT4O43236 478 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 GLRX3O76003 335 aaKnown RBP9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 CLTBP09497 229 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 RASIP1Q5U651 963 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 OLFML2BQ68BL8 750 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 SPTY2D1Q68D10 685 aaPredicted RBP9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 USP17L2Q6R6M4 530 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 FERMT2Q96AC1 680 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 GAS2L1Q99501 681 aaPredicted RBP9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 LRFN3Q9BTN0 628 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 C1QTNF1Q9BXJ1 281 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 PBX4Q9BYU1 374 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 SIL1Q9H173 461 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 GINM1Q9NU53 330 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 CEP126Q9P2H0 1117 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 ZBTB21Q9ULJ3 1066 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 PHF24Q9UPV7 400 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 MUC6Q6W4X9 2439 aa9.6□□□□□ -0.87
HERPUD1-206ENST00000563343 GRXCR1A8MXD5 290 aa9.59□□□□□ -0.87
HERPUD1-206ENST00000563343 GDF11O95390 407 aa9.59□□□□□ -0.87
HERPUD1-206ENST00000563343 CCNA1P78396 465 aa9.59□□□□□ -0.87
HERPUD1-206ENST00000563343 FPGSQ05932 587 aa9.59□□□□□ -0.87
HERPUD1-206ENST00000563343 FAM47AQ5JRC9 791 aa9.59□□□□□ -0.87
HERPUD1-206ENST00000563343 CATSPERGQ6ZRH7 1159 aa9.59□□□□□ -0.87
HERPUD1-206ENST00000563343 ERICH6Q7L0X2 663 aa9.59□□□□□ -0.87
HERPUD1-206ENST00000563343 C16orf59Q7L2K0 433 aa9.59□□□□□ -0.87
HERPUD1-206ENST00000563343 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.59□□□□□ -0.872e-9■■□□□ 13.7
HERPUD1-206ENST00000563343 EPHX3Q9H6B9 360 aa9.59□□□□□ -0.87
HERPUD1-206ENST00000563343 MYH8P13535 1937 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 SPDYE16A6NNV3 312 aaPredicted RBP9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 USP17L15C9J2P7 530 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 USP17L13C9JLJ4 530 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 USP17L11C9JVI0 530 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 USP17L18D6R9N7 530 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 USP17L22D6RA61 530 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 USP17L17D6RBQ6 530 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 USP17L19D6RCP7 530 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 USP17L20D6RJB6 530 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 COBLO75128 1261 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 RAG1P15918 1043 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 TIMM10P62072 90 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 FAAP100Q0VG06 881 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 USP17L24Q0WX57 530 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 PRAMEF19Q5SWL8 479 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 TEX11Q8IYF3 940 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 SH3RF3Q8TEJ3 882 aaPredicted RBP9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 DHX36Q9H2U1 1008 aaKnown RBP9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 CXXC1Q9P0U4 656 aaPredicted RBP9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 HMG20BQ9P0W2 317 aa9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.58□□□□□ -0.88
HERPUD1-206ENST00000563343 MCM3APO60318 1980 aa9.57□□□□□ -0.88
HERPUD1-206ENST00000563343 LDHCP07864 332 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms