RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 GBP1P32455 592 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 CRKP46108 304 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 GJA8P48165 433 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 TNNI2P48788 182 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 RNF4P78317 190 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 PAK2Q13177 524 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 INTS3Q68E01 1043 aaKnown RBP4.82□□□□□ -1.64
CHD9-207ENST00000562806 GK5Q6ZS86 529 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 UBE3DQ7Z6J8 389 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 THAP5Q7Z6K1 395 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 SHISA5Q8N114 240 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 Q8N3U1 123 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 OR6P1Q8NGX9 317 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 ASB11Q8WXH4 323 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 HRASLS5Q96KN8 279 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 FERD3LQ96RJ6 166 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 CRBNQ96SW2 442 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 ASPNQ9BXN1 380 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 TNKS2Q9H2K2 1166 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 ZC3H7BQ9UGR2 993 aaKnown RBP4.82□□□□□ -1.64
CHD9-207ENST00000562806 KLHL3Q9UH77 587 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 INPP5FQ9Y2H2 1132 aa4.82□□□□□ -1.64
CHD9-207ENST00000562806 RGS13O14921 159 aa4.81□□□□□ -1.64
CHD9-207ENST00000562806 HOXA10P31260 410 aaPredicted RBP4.81□□□□□ -1.64
CHD9-207ENST00000562806 NLRC3Q7RTR2 1065 aa4.81□□□□□ -1.64
CHD9-207ENST00000562806 MFSD4AQ8N468 514 aa4.81□□□□□ -1.64
CHD9-207ENST00000562806 TAB3Q8N5C8 712 aaPredicted RBP4.81□□□□□ -1.64
CHD9-207ENST00000562806 RBBP8NLQ8NC74 664 aaPredicted RBP4.81□□□□□ -1.64
CHD9-207ENST00000562806 XAGE3Q8WTP9 111 aa4.81□□□□□ -1.64
CHD9-207ENST00000562806 RNF141Q8WVD5 230 aa4.81□□□□□ -1.64
CHD9-207ENST00000562806 TMEM40Q8WWA1 233 aa4.81□□□□□ -1.64
CHD9-207ENST00000562806 DHRS1Q96LJ7 313 aa4.81□□□□□ -1.64
CHD9-207ENST00000562806 HEXIM2Q96MH2 286 aaKnown RBP4.81□□□□□ -1.64
CHD9-207ENST00000562806 TM9SF2Q99805 663 aa4.81□□□□□ -1.64
CHD9-207ENST00000562806 TRIT1Q9H3H1 467 aaKnown RBP4.81□□□□□ -1.64
CHD9-207ENST00000562806 CNNM2Q9H8M5 875 aa4.81□□□□□ -1.64
CHD9-207ENST00000562806 ZNRF3Q9ULT6 936 aa4.81□□□□□ -1.64
CHD9-207ENST00000562806 CHURC1-FNTBB4DL54 471 aa4.8□□□□□ -1.64
CHD9-207ENST00000562806 SOX9P48436 509 aa4.8□□□□□ -1.64
CHD9-207ENST00000562806 CLCQ05315 142 aa4.8□□□□□ -1.64
CHD9-207ENST00000562806 DNAJB8Q8NHS0 232 aa4.8□□□□□ -1.64
CHD9-207ENST00000562806 DPH2Q9BQC3 489 aaPredicted RBP4.8□□□□□ -1.64
CHD9-207ENST00000562806 CAPN10Q9HC96 672 aa4.8□□□□□ -1.64
CHD9-207ENST00000562806 CCDC39Q9UFE4 941 aa4.8□□□□□ -1.64
CHD9-207ENST00000562806 SLC12A7Q9Y666 1083 aa4.8□□□□□ -1.64
CHD9-207ENST00000562806 UPK3BL1B0FP48 263 aa4.79□□□□□ -1.64
CHD9-207ENST00000562806 UPK3BL2E5RIL1 263 aa4.79□□□□□ -1.64
CHD9-207ENST00000562806 TNFRSF10CO14798 259 aa4.79□□□□□ -1.64
CHD9-207ENST00000562806 MED26O95402 600 aa4.79□□□□□ -1.64
CHD9-207ENST00000562806 NME1P15531 152 aaKnown RBP4.79□□□□□ -1.64
CHD9-207ENST00000562806 ITIH2P19823 946 aa4.79□□□□□ -1.64
CHD9-207ENST00000562806 ARSHQ5FYA8 562 aa4.79□□□□□ -1.64
CHD9-207ENST00000562806 C9orf131Q5VYM1 1079 aa4.79□□□□□ -1.64
CHD9-207ENST00000562806 CDH24Q86UP0 819 aa4.79□□□□□ -1.64
CHD9-207ENST00000562806 PLD6Q8N2A8 252 aaKnown RBP4.79□□□□□ -1.64
CHD9-207ENST00000562806 FAM181AQ8N9Y4 354 aa4.79□□□□□ -1.64
CHD9-207ENST00000562806 PPP1R13LQ8WUF5 828 aa4.79□□□□□ -1.64
CHD9-207ENST00000562806 BCL7CQ8WUZ0 217 aaPredicted RBP4.79□□□□□ -1.64
CHD9-207ENST00000562806 ATG4CQ96DT6 458 aa4.79□□□□□ -1.64
CHD9-207ENST00000562806 CCDC120Q96HB5 630 aa4.79□□□□□ -1.64
CHD9-207ENST00000562806 ASCC2Q9H1I8 757 aaPredicted RBP4.79□□□□□ -1.64
CHD9-207ENST00000562806 LMCD1Q9NZU5 365 aa4.79□□□□□ -1.64
CHD9-207ENST00000562806 CAPN6Q9Y6Q1 641 aa4.79□□□□□ -1.64
CHD9-207ENST00000562806 CLEC3AO75596 197 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 EIF6P56537 245 aaKnown RBP4.78□□□□□ -1.64
CHD9-207ENST00000562806 AOC3Q16853 763 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 NKPD1Q17RQ9 610 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 BBS9Q3SYG4 887 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 ANGEL2Q5VTE6 544 aaKnown RBP4.78□□□□□ -1.64
CHD9-207ENST00000562806 OVOS1Q6IE37 1185 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 TMPRSS7Q7RTY8 843 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 SPACA3Q8IXA5 215 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 TP53INP2Q8IXH6 220 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 FLCNQ8NFG4 579 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 RIN3Q8TB24 985 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 ENOX1Q8TC92 643 aaKnown RBP4.78□□□□□ -1.64
CHD9-207ENST00000562806 CPLX3Q8WVH0 158 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 SMARCC1Q92922 1105 aaPredicted RBP4.78□□□□□ -1.64
CHD9-207ENST00000562806 KREMEN1Q96MU8 473 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 KIF2CQ99661 725 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 GPATCH2Q9NW75 528 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 PLAGL2Q9UPG8 496 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 EFR3BQ9Y2G0 817 aa4.78□□□□□ -1.64
CHD9-207ENST00000562806 CBX7O95931 251 aa4.77□□□□□ -1.65
CHD9-207ENST00000562806 GP2P55259 537 aaKnown RBP4.77□□□□□ -1.65
CHD9-207ENST00000562806 FBXW10Q5XX13 1052 aa4.77□□□□□ -1.65
CHD9-207ENST00000562806 C19orf47Q8N9M1 422 aaKnown RBP4.77□□□□□ -1.65
CHD9-207ENST00000562806 SLC43A3Q8NBI5 491 aa4.77□□□□□ -1.65
CHD9-207ENST00000562806 BAHD1Q8TBE0 780 aaPredicted RBP4.77□□□□□ -1.65
CHD9-207ENST00000562806 ZNF428Q96B54 188 aa4.77□□□□□ -1.65
CHD9-207ENST00000562806 SRRTQ9BXP5 876 aaKnown RBP4.77□□□□□ -1.65
CHD9-207ENST00000562806 GPR62Q9BZJ7 368 aa4.77□□□□□ -1.65
CHD9-207ENST00000562806 ACBD3Q9H3P7 528 aa4.77□□□□□ -1.65
CHD9-207ENST00000562806 IGSF5Q9NSI5 407 aa4.77□□□□□ -1.65
CHD9-207ENST00000562806 GINM1Q9NU53 330 aa4.77□□□□□ -1.65
CHD9-207ENST00000562806 PITPNM2Q9BZ72 1349 aa4.76□□□□□ -1.65
CHD9-207ENST00000562806 GUCY2CP25092 1073 aa4.76□□□□□ -1.65
CHD9-207ENST00000562806 GIPRP48546 466 aa4.76□□□□□ -1.65
CHD9-207ENST00000562806 SYTL4Q96C24 671 aaPredicted RBP4.76□□□□□ -1.65
CHD9-207ENST00000562806 PRR13Q9NZ81 148 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms