RNA–Protein interactions for RNA: ENST00000562599.5

POLR2C-202, Transcript of RNA polymerase II subunit C, humanhuman

TSL 5

Gene POLR2C, Length 748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2C-202ENST00000562599 CDC27P30260 824 aa13.12□□□□□ -0.31
POLR2C-202ENST00000562599 RCSD1Q6JBY9 416 aa13.12□□□□□ -0.31
POLR2C-202ENST00000562599 CTCFLQ8NI51 663 aaPredicted RBP13.12□□□□□ -0.31
POLR2C-202ENST00000562599 TNPO1Q92973 898 aaKnown RBP13.12□□□□□ -0.31
POLR2C-202ENST00000562599 CEP95Q96GE4 821 aa13.12□□□□□ -0.31
POLR2C-202ENST00000562599 TMEM39BQ9GZU3 492 aa13.12□□□□□ -0.31
POLR2C-202ENST00000562599 RBM28Q9NW13 759 aaKnown RBP13.12□□□□□ -0.31
POLR2C-202ENST00000562599 HACL1Q9UJ83 578 aa13.12□□□□□ -0.31
POLR2C-202ENST00000562599 NID2Q14112 1375 aa13.11□□□□□ -0.31
POLR2C-202ENST00000562599 PLIN4Q96Q06 1357 aa13.11□□□□□ -0.31
POLR2C-202ENST00000562599 VPS37CA5D8V6 355 aaPredicted RBP13.11□□□□□ -0.31
POLR2C-202ENST00000562599 H3BQV1 296 aa13.11□□□□□ -0.31
POLR2C-202ENST00000562599 KIF5BP33176 963 aa13.11□□□□□ -0.31
POLR2C-202ENST00000562599 EPS15P42566 896 aa13.11□□□□□ -0.31
POLR2C-202ENST00000562599 SSRP1Q08945 709 aaKnown RBP13.11□□□□□ -0.31
POLR2C-202ENST00000562599 PKP1Q13835 747 aa13.11□□□□□ -0.31
POLR2C-202ENST00000562599 RASA3Q14644 834 aa13.11□□□□□ -0.31
POLR2C-202ENST00000562599 IFFO2Q5TF58 517 aa13.11□□□□□ -0.31
POLR2C-202ENST00000562599 TATDN1Q6P1N9 297 aa13.11□□□□□ -0.31
POLR2C-202ENST00000562599 METTL16Q86W50 562 aaKnown RBP13.11□□□□□ -0.31
POLR2C-202ENST00000562599 APOBEC3FQ8IUX4 373 aaKnown RBP13.11□□□□□ -0.31
POLR2C-202ENST00000562599 PNMA1Q8ND90 353 aa13.11□□□□□ -0.31
POLR2C-202ENST00000562599 TMEM47Q9BQJ4 181 aa13.11□□□□□ -0.31
POLR2C-202ENST00000562599 DNAJC18Q9H819 358 aa13.11□□□□□ -0.31
POLR2C-202ENST00000562599 CABP5Q9NP86 173 aa13.11□□□□□ -0.31
POLR2C-202ENST00000562599 ORC3Q9UBD5 711 aaPredicted RBP13.11□□□□□ -0.31
POLR2C-202ENST00000562599 SIPA1L1O43166 1804 aa13.11□□□□□ -0.31
POLR2C-202ENST00000562599 PPFIA3O75145 1194 aa13.1□□□□□ -0.31
POLR2C-202ENST00000562599 BRD1O95696 1058 aa13.1□□□□□ -0.31
POLR2C-202ENST00000562599 SLURP2P0DP57 97 aa13.1□□□□□ -0.31
POLR2C-202ENST00000562599 ZSCAN22P10073 491 aaPredicted RBP13.1□□□□□ -0.31
POLR2C-202ENST00000562599 ATP2B2Q01814 1243 aa13.1□□□□□ -0.31
POLR2C-202ENST00000562599 AKAP17AQ02040 695 aaKnown RBP13.1□□□□□ -0.31
POLR2C-202ENST00000562599 TROAPQ12815 778 aa13.1□□□□□ -0.31
POLR2C-202ENST00000562599 ABCB5Q2M3G0 1257 aa13.1□□□□□ -0.31
POLR2C-202ENST00000562599 ANGEL2Q5VTE6 544 aaKnown RBP13.1□□□□□ -0.31
POLR2C-202ENST00000562599 TRIM22Q8IYM9 498 aa13.1□□□□□ -0.31
POLR2C-202ENST00000562599 TRPM4Q8TD43 1214 aa13.1□□□□□ -0.31
POLR2C-202ENST00000562599 GBP4Q96PP9 640 aa13.1□□□□□ -0.31
POLR2C-202ENST00000562599 ADARB2Q9NS39 739 aaKnown RBP13.1□□□□□ -0.31
POLR2C-202ENST00000562599 FAM217BQ9NTX9 383 aaPredicted RBP13.1□□□□□ -0.31
POLR2C-202ENST00000562599 MTMR4Q9NYA4 1195 aa13.1□□□□□ -0.31
POLR2C-202ENST00000562599 MTMR7Q9Y216 660 aa13.1□□□□□ -0.31
POLR2C-202ENST00000562599 IGKV6D-41A0A0C4DH26 115 aa13.09□□□□□ -0.31
POLR2C-202ENST00000562599 TBC1D12O60347 775 aa13.09□□□□□ -0.31
POLR2C-202ENST00000562599 GDF11O95390 407 aa13.09□□□□□ -0.31
POLR2C-202ENST00000562599 TTLL1O95922 423 aa13.09□□□□□ -0.31
POLR2C-202ENST00000562599 IFNAR1P17181 557 aa13.09□□□□□ -0.31
POLR2C-202ENST00000562599 GNAQP50148 359 aa13.09□□□□□ -0.31
POLR2C-202ENST00000562599 FOSBP53539 338 aa13.09□□□□□ -0.31
POLR2C-202ENST00000562599 TMEM179Q6ZVK1 233 aa13.09□□□□□ -0.31
POLR2C-202ENST00000562599 WASF1Q92558 559 aa13.09□□□□□ -0.31
POLR2C-202ENST00000562599 PHKBQ93100 1093 aa13.09□□□□□ -0.31
POLR2C-202ENST00000562599 HOOK2Q96ED9 719 aa13.09□□□□□ -0.31
POLR2C-202ENST00000562599 MAP3K14Q99558 947 aa13.09□□□□□ -0.31
POLR2C-202ENST00000562599 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.09□□□□□ -0.31
POLR2C-202ENST00000562599 SLC26A6Q9BXS9 759 aa13.09□□□□□ -0.31
POLR2C-202ENST00000562599 CLIP2Q9UDT6 1046 aa13.09□□□□□ -0.31
POLR2C-202ENST00000562599 SCAF8Q9UPN6 1271 aaKnown RBP13.09□□□□□ -0.31
POLR2C-202ENST00000562599 ZDHHC9Q9Y397 364 aa13.09□□□□□ -0.31
POLR2C-202ENST00000562599 ASTN2O75129 1339 aaPredicted RBP13.09□□□□□ -0.31
POLR2C-202ENST00000562599 ZC3H4Q9UPT8 1303 aaKnown RBP13.09□□□□□ -0.31
POLR2C-202ENST00000562599 FMNL1O95466 1100 aaPredicted RBP13.08□□□□□ -0.32
POLR2C-202ENST00000562599 FDPSP14324 419 aaKnown RBP13.08□□□□□ -0.32
POLR2C-202ENST00000562599 GRM4Q14833 912 aa13.08□□□□□ -0.32
POLR2C-202ENST00000562599 NTRK3Q16288 839 aa13.08□□□□□ -0.32
POLR2C-202ENST00000562599 MIGA2Q7L4E1 593 aa13.08□□□□□ -0.32
POLR2C-202ENST00000562599 CCDC82Q8N4S0 544 aa13.08□□□□□ -0.32
POLR2C-202ENST00000562599 DEFB129Q9H1M3 183 aa13.08□□□□□ -0.32
POLR2C-202ENST00000562599 KANSL2Q9H9L4 492 aa13.08□□□□□ -0.32
POLR2C-202ENST00000562599 GGA3Q9NZ52 723 aa13.08□□□□□ -0.32
POLR2C-202ENST00000562599 MTMR6Q9Y217 621 aa13.08□□□□□ -0.32
POLR2C-202ENST00000562599 ATP6V1DQ9Y5K8 247 aa13.08□□□□□ -0.32
POLR2C-202ENST00000562599 STK36Q9NRP7 1315 aa13.08□□□□□ -0.32
POLR2C-202ENST00000562599 F13A1P00488 732 aa13.07□□□□□ -0.32
POLR2C-202ENST00000562599 GH2P01242 217 aa13.07□□□□□ -0.32
POLR2C-202ENST00000562599 PARP1P09874 1014 aaKnown RBP13.07□□□□□ -0.32
POLR2C-202ENST00000562599 NOVP48745 357 aa13.07□□□□□ -0.32
POLR2C-202ENST00000562599 HIRAP54198 1017 aaPredicted RBP13.07□□□□□ -0.32
POLR2C-202ENST00000562599 TRIM29Q14134 588 aa13.07□□□□□ -0.32
POLR2C-202ENST00000562599 SEPT2Q15019 361 aa13.07□□□□□ -0.32
POLR2C-202ENST00000562599 NFKBIBQ15653 356 aa13.07□□□□□ -0.32
POLR2C-202ENST00000562599 TMTC3Q6ZXV5 915 aa13.07□□□□□ -0.32
POLR2C-202ENST00000562599 CDAN1Q8IWY9 1227 aa13.07□□□□□ -0.32
POLR2C-202ENST00000562599 CMTR1Q8N1G2 835 aaKnown RBP13.07□□□□□ -0.32
POLR2C-202ENST00000562599 LRRC47Q8N1G4 583 aaKnown RBP13.07□□□□□ -0.32
POLR2C-202ENST00000562599 C8orf76Q96K31 380 aa13.07□□□□□ -0.32
POLR2C-202ENST00000562599 LZTS2Q9BRK4 669 aa13.07□□□□□ -0.32
POLR2C-202ENST00000562599 ALG1Q9BT22 464 aa13.07□□□□□ -0.32
POLR2C-202ENST00000562599 NYAP2Q9P242 653 aa13.07□□□□□ -0.32
POLR2C-202ENST00000562599 PGAP2Q9UHJ9 254 aa13.07□□□□□ -0.32
POLR2C-202ENST00000562599 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
POLR2C-202ENST00000562599 GLTPD2A6NH11 291 aa13.06□□□□□ -0.32
POLR2C-202ENST00000562599 GOLGA6L22H0YM25 854 aa13.06□□□□□ -0.32
POLR2C-202ENST00000562599 PLEKHA8P1O95397 391 aa13.06□□□□□ -0.32
POLR2C-202ENST00000562599 DEXIO95424 95 aa13.06□□□□□ -0.32
POLR2C-202ENST00000562599 EEF2P13639 858 aaKnown RBP13.06□□□□□ -0.32
POLR2C-202ENST00000562599 ICA1Q05084 483 aa13.06□□□□□ -0.32
POLR2C-202ENST00000562599 DCAF15Q66K64 600 aa13.06□□□□□ -0.32
POLR2C-202ENST00000562599 CLEC10AQ8IUN9 316 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms