RNA–Protein interactions for RNA: ENST00000562424.1

FANCA-209, Transcript of FA complementation group A, humanhuman

TSL 2

Gene FANCA, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-209ENST00000562424 PROCA1Q8NCQ7 364 aaPredicted RBP13.84□□□□□ -0.19
FANCA-209ENST00000562424 APPBP2Q92624 585 aa13.84□□□□□ -0.19
FANCA-209ENST00000562424 PARK7Q99497 189 aaKnown RBP13.84□□□□□ -0.19
FANCA-209ENST00000562424 MFRPQ9BY79 579 aa13.84□□□□□ -0.19
FANCA-209ENST00000562424 STAP2Q9UGK3 403 aa13.84□□□□□ -0.19
FANCA-209ENST00000562424 ZBTB21Q9ULJ3 1066 aa13.84□□□□□ -0.19
FANCA-209ENST00000562424 MGAMO43451 1857 aa13.84□□□□□ -0.19
FANCA-209ENST00000562424 IGHDP01880 384 aa13.83□□□□□ -0.2
FANCA-209ENST00000562424 SHMT1P34896 483 aa13.83□□□□□ -0.2
FANCA-209ENST00000562424 PDE1AP54750 535 aa13.83□□□□□ -0.2
FANCA-209ENST00000562424 CAP1Q01518 475 aa13.83□□□□□ -0.2
FANCA-209ENST00000562424 LRRFIP1Q32MZ4 808 aaKnown RBP13.83□□□□□ -0.2
FANCA-209ENST00000562424 SH3D19Q5HYK7 790 aa13.83□□□□□ -0.2
FANCA-209ENST00000562424 OSBP2Q969R2 916 aa13.83□□□□□ -0.2
FANCA-209ENST00000562424 AGTPBP1Q9UPW5 1226 aa13.83□□□□□ -0.2
FANCA-209ENST00000562424 TRIM17Q9Y577 477 aa13.83□□□□□ -0.2
FANCA-209ENST00000562424 GH2P01242 217 aa13.82□□□□□ -0.2
FANCA-209ENST00000562424 CYP2C8P10632 490 aa13.82□□□□□ -0.2
FANCA-209ENST00000562424 CYP2D6P10635 497 aa13.82□□□□□ -0.2
FANCA-209ENST00000562424 HMGCS2P54868 508 aa13.82□□□□□ -0.2
FANCA-209ENST00000562424 BACE1P56817 501 aa13.82□□□□□ -0.2
FANCA-209ENST00000562424 CERKLQ49MI3 558 aaPredicted RBP13.82□□□□□ -0.2
FANCA-209ENST00000562424 DDRGK1Q96HY6 314 aa13.82□□□□□ -0.2
FANCA-209ENST00000562424 STRBPQ96SI9 672 aaKnown RBP13.82□□□□□ -0.2
FANCA-209ENST00000562424 LNPKQ9C0E8 428 aa13.82□□□□□ -0.2
FANCA-209ENST00000562424 EFCC1Q9HA90 598 aa13.82□□□□□ -0.2
FANCA-209ENST00000562424 CPA4Q9UI42 421 aa13.82□□□□□ -0.2
FANCA-209ENST00000562424 SLC4A4Q9Y6R1 1079 aa13.82□□□□□ -0.2
FANCA-209ENST00000562424 HTTP42858 3142 aa13.81□□□□□ -0.2
FANCA-209ENST00000562424 C19orf81C9J6K1 198 aa13.81□□□□□ -0.2
FANCA-209ENST00000562424 LACTBP83111 547 aaPredicted RBP13.81□□□□□ -0.2
FANCA-209ENST00000562424 MTMR2Q13614 643 aa13.81□□□□□ -0.2
FANCA-209ENST00000562424 ARHGEF6Q15052 776 aa13.81□□□□□ -0.2
FANCA-209ENST00000562424 ABCB5Q2M3G0 1257 aa13.81□□□□□ -0.2
FANCA-209ENST00000562424 TREML2Q5T2D2 321 aa13.81□□□□□ -0.2
FANCA-209ENST00000562424 FSD1Q9BTV5 496 aa13.81□□□□□ -0.2
FANCA-209ENST00000562424 TSHZ2Q9NRE2 1034 aa13.81□□□□□ -0.2
FANCA-209ENST00000562424 SWAP70Q9UH65 585 aa13.81□□□□□ -0.2
FANCA-209ENST00000562424 DOCK3Q8IZD9 2030 aa13.81□□□□□ -0.2
FANCA-209ENST00000562424 USP17L10C9JJH3 530 aa13.8□□□□□ -0.2
FANCA-209ENST00000562424 USP17L12C9JPN9 530 aa13.8□□□□□ -0.2
FANCA-209ENST00000562424 USP17L21D6R901 530 aa13.8□□□□□ -0.2
FANCA-209ENST00000562424 GPAA1O43292 621 aa13.8□□□□□ -0.2
FANCA-209ENST00000562424 BCRP11274 1271 aa13.8□□□□□ -0.2
FANCA-209ENST00000562424 NUCB1Q02818 461 aa13.8□□□□□ -0.2
FANCA-209ENST00000562424 KIF22Q14807 665 aa13.8□□□□□ -0.2
FANCA-209ENST00000562424 C12orf60Q5U649 245 aa13.8□□□□□ -0.2
FANCA-209ENST00000562424 B4GALNT3Q6L9W6 998 aa13.8□□□□□ -0.2
FANCA-209ENST00000562424 GIMAP6Q6P9H5 292 aa13.8□□□□□ -0.2
FANCA-209ENST00000562424 CHD1LQ86WJ1 897 aa13.8□□□□□ -0.2
FANCA-209ENST00000562424 AMOTL1Q8IY63 956 aa13.8□□□□□ -0.2
FANCA-209ENST00000562424 CABP5Q9NP86 173 aa13.8□□□□□ -0.2
FANCA-209ENST00000562424 PNMA3Q9UL41 463 aa13.8□□□□□ -0.2
FANCA-209ENST00000562424 CYP2D7A0A087X1C5 515 aa13.79□□□□□ -0.2
FANCA-209ENST00000562424 GSG1L2A8MUP6 293 aa13.79□□□□□ -0.2
FANCA-209ENST00000562424 M0R2C6 588 aa13.79□□□□□ -0.2
FANCA-209ENST00000562424 GNAT2P19087 354 aa13.79□□□□□ -0.2
FANCA-209ENST00000562424 IRX6P78412 446 aaPredicted RBP13.79□□□□□ -0.2
FANCA-209ENST00000562424 PABPC4Q13310 644 aaKnown RBP eCLIP13.79□□□□□ -0.26e-8■□□□□ 9.5
FANCA-209ENST00000562424 ZMYM1Q5SVZ6 1142 aa13.79□□□□□ -0.2
FANCA-209ENST00000562424 CTR9Q6PD62 1173 aa13.79□□□□□ -0.2
FANCA-209ENST00000562424 SLC44A5Q8NCS7 719 aa13.79□□□□□ -0.2
FANCA-209ENST00000562424 DYNLL2Q96FJ2 89 aa13.79□□□□□ -0.2
FANCA-209ENST00000562424 ARHGAP39Q9C0H5 1083 aa13.79□□□□□ -0.2
FANCA-209ENST00000562424 TMOD4Q9NZQ9 345 aa13.79□□□□□ -0.2
FANCA-209ENST00000562424 ARPP21Q9UBL0 812 aaPredicted RBP13.79□□□□□ -0.2
FANCA-209ENST00000562424 PTPN22Q9Y2R2 807 aa13.79□□□□□ -0.2
FANCA-209ENST00000562424 KIAA0100Q14667 2235 aaKnown RBP13.78□□□□□ -0.2
FANCA-209ENST00000562424 SMIM22K7EJ46 135 aa13.78□□□□□ -0.2
FANCA-209ENST00000562424 ATMINO43313 823 aaPredicted RBP13.78□□□□□ -0.2
FANCA-209ENST00000562424 GNRH1P01148 92 aa13.78□□□□□ -0.2
FANCA-209ENST00000562424 GUCY1A2P33402 732 aa13.78□□□□□ -0.2
FANCA-209ENST00000562424 RAB3GAP1Q15042 981 aa13.78□□□□□ -0.2
FANCA-209ENST00000562424 SBK1Q52WX2 424 aa13.78□□□□□ -0.2
FANCA-209ENST00000562424 C16orf86Q6ZW13 317 aa13.78□□□□□ -0.2
FANCA-209ENST00000562424 SMCR8Q8TEV9 937 aaPredicted RBP13.78□□□□□ -0.2
FANCA-209ENST00000562424 EVI5LQ96CN4 794 aa13.78□□□□□ -0.2
FANCA-209ENST00000562424 SEC62Q99442 399 aaKnown RBP13.78□□□□□ -0.2
FANCA-209ENST00000562424 ASCC2Q9H1I8 757 aaPredicted RBP13.78□□□□□ -0.2
FANCA-209ENST00000562424 POTEFA5A3E0 1075 aa13.77□□□□□ -0.21
FANCA-209ENST00000562424 OSBPP22059 807 aa13.77□□□□□ -0.21
FANCA-209ENST00000562424 CTGFP29279 349 aa13.77□□□□□ -0.21
FANCA-209ENST00000562424 HOXA7P31268 230 aaPredicted RBP13.77□□□□□ -0.21
FANCA-209ENST00000562424 PSMC4P43686 418 aa13.77□□□□□ -0.21
FANCA-209ENST00000562424 CDK8P49336 464 aa13.77□□□□□ -0.21
FANCA-209ENST00000562424 ATN1P54259 1190 aaPredicted RBP13.77□□□□□ -0.21
FANCA-209ENST00000562424 SEPT2Q15019 361 aa13.77□□□□□ -0.21
FANCA-209ENST00000562424 USP17L2Q6R6M4 530 aa13.77□□□□□ -0.21
FANCA-209ENST00000562424 TICAM2Q86XR7 235 aa13.77□□□□□ -0.21
FANCA-209ENST00000562424 PLEKHM2Q8IWE5 1019 aa13.77□□□□□ -0.21
FANCA-209ENST00000562424 FBXO22Q8NEZ5 403 aa13.77□□□□□ -0.21
FANCA-209ENST00000562424 SP7Q8TDD2 431 aaPredicted RBP13.77□□□□□ -0.21
FANCA-209ENST00000562424 C12orf42Q96LP6 360 aa13.77□□□□□ -0.21
FANCA-209ENST00000562424 FEZ1Q99689 392 aa13.77□□□□□ -0.21
FANCA-209ENST00000562424 GREB1LQ9C091 1923 aaPredicted RBP13.77□□□□□ -0.21
FANCA-209ENST00000562424 KIAA1683Q9H0B3 1180 aa13.77□□□□□ -0.21
FANCA-209ENST00000562424 OSBPL3Q9H4L5 887 aa13.77□□□□□ -0.21
FANCA-209ENST00000562424 EPB41L4AQ9HCS5 686 aaPredicted RBP13.77□□□□□ -0.21
FANCA-209ENST00000562424 EMILIN3Q9NT22 766 aa13.77□□□□□ -0.21
FANCA-209ENST00000562424 ROBO3Q96MS0 1386 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms