RNA–Protein interactions for RNA: ENST00000562028.1

DENND4A-204, Transcript of DENN domain containing 4A, humanhuman

TSL 3

Gene DENND4A, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-204ENST00000562028 PPP1R13LQ8WUF5 828 aa8.76□□□□□ -1.01
DENND4A-204ENST00000562028 KIF2CQ99661 725 aa8.76□□□□□ -1.01
DENND4A-204ENST00000562028 FAM170BA6NMN3 283 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 EOMESO95936 686 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 ACRP10323 421 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 GBP1P32455 592 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 ETFBP38117 255 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 CASP7P55210 303 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 TNNI3KQ59H18 835 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 RUFY4Q6ZNE9 571 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 ZNF765Q7L2R6 523 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 FAM169BQ8N8A8 192 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 DNAJB8Q8NHS0 232 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 RIN3Q8TB24 985 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 SHKBP1Q8TBC3 707 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 BAHD1Q8TBE0 780 aaPredicted RBP8.75□□□□□ -1.01
DENND4A-204ENST00000562028 SLC9A7Q96T83 725 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 ATG3Q9NT62 314 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 PRKAG3Q9UGI9 489 aa8.75□□□□□ -1.01
DENND4A-204ENST00000562028 WDR64B1ANS9 1081 aa8.74□□□□□ -1.01
DENND4A-204ENST00000562028 STK10O94804 968 aaKnown RBP8.74□□□□□ -1.01
DENND4A-204ENST00000562028 ETV3P41162 512 aa8.74□□□□□ -1.01
DENND4A-204ENST00000562028 FAM214BQ7L5A3 538 aa8.74□□□□□ -1.01
DENND4A-204ENST00000562028 COX4I2Q96KJ9 171 aa8.74□□□□□ -1.01
DENND4A-204ENST00000562028 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.74□□□□□ -1.01
DENND4A-204ENST00000562028 SLC12A7Q9Y666 1083 aa8.74□□□□□ -1.01
DENND4A-204ENST00000562028 UBOX5O94941 541 aa8.73□□□□□ -1.01
DENND4A-204ENST00000562028 CYP7A1P22680 504 aa8.73□□□□□ -1.01
DENND4A-204ENST00000562028 POLR2BP30876 1174 aaKnown RBP8.73□□□□□ -1.01
DENND4A-204ENST00000562028 GTF2F1P35269 517 aaKnown RBP eCLIP8.73□□□□□ -1.01
DENND4A-204ENST00000562028 CDH24Q86UP0 819 aa8.73□□□□□ -1.01
DENND4A-204ENST00000562028 OSBPL1AQ9BXW6 950 aa8.73□□□□□ -1.01
DENND4A-204ENST00000562028 SEMA6BQ9H3T3 888 aa8.73□□□□□ -1.01
DENND4A-204ENST00000562028 GTF2IRD1Q9UHL9 959 aa8.73□□□□□ -1.01
DENND4A-204ENST00000562028 A0A1W2PQH9 124 aa8.72□□□□□ -1.01
DENND4A-204ENST00000562028 IGF2BP3O00425 579 aaKnown RBP eCLIP8.72□□□□□ -1.01
DENND4A-204ENST00000562028 SMAD7O15105 426 aaKnown RBP8.72□□□□□ -1.01
DENND4A-204ENST00000562028 PRSS36Q5K4E3 855 aa8.72□□□□□ -1.01
DENND4A-204ENST00000562028 UNC5AQ6ZN44 842 aa8.72□□□□□ -1.01
DENND4A-204ENST00000562028 TTC6Q86TZ1 520 aa8.72□□□□□ -1.01
DENND4A-204ENST00000562028 ZDHHC13Q8IUH4 622 aa8.72□□□□□ -1.01
DENND4A-204ENST00000562028 HIRIP3Q9BW71 556 aaPredicted RBP8.72□□□□□ -1.01
DENND4A-204ENST00000562028 PRDM5Q9NQX1 630 aaPredicted RBP8.72□□□□□ -1.01
DENND4A-204ENST00000562028 TPX2Q9ULW0 747 aaKnown RBP8.72□□□□□ -1.01
DENND4A-204ENST00000562028 MAPK8IP1Q9UQF2 711 aa8.72□□□□□ -1.01
DENND4A-204ENST00000562028 RBL2Q08999 1139 aa8.71□□□□□ -1.02
DENND4A-204ENST00000562028 UBXN4Q92575 508 aa8.71□□□□□ -1.02
DENND4A-204ENST00000562028 DHX38Q92620 1227 aaKnown RBP8.71□□□□□ -1.02
DENND4A-204ENST00000562028 DHRS1Q96LJ7 313 aa8.71□□□□□ -1.02
DENND4A-204ENST00000562028 HEXIM2Q96MH2 286 aaKnown RBP8.71□□□□□ -1.02
DENND4A-204ENST00000562028 COL17A1Q9UMD9 1497 aaPredicted RBP8.7□□□□□ -1.02
DENND4A-204ENST00000562028 CHMP4BP1P59074 171 aa8.7□□□□□ -1.02
DENND4A-204ENST00000562028 ZYXQ15942 572 aaKnown RBP8.7□□□□□ -1.02
DENND4A-204ENST00000562028 PPP2R5EQ16537 467 aa8.7□□□□□ -1.02
DENND4A-204ENST00000562028 SFRP5Q5T4F7 317 aa8.7□□□□□ -1.02
DENND4A-204ENST00000562028 C22orf34Q6ZV56 151 aa8.7□□□□□ -1.02
DENND4A-204ENST00000562028 ANKS3Q6ZW76 656 aa8.7□□□□□ -1.02
DENND4A-204ENST00000562028 TMEM192Q8IY95 271 aa8.7□□□□□ -1.02
DENND4A-204ENST00000562028 RNF141Q8WVD5 230 aa8.7□□□□□ -1.02
DENND4A-204ENST00000562028 KREMEN1Q96MU8 473 aa8.7□□□□□ -1.02
DENND4A-204ENST00000562028 MKNK2Q9HBH9 465 aa8.7□□□□□ -1.02
DENND4A-204ENST00000562028 PPP1R1BQ9UD71 204 aaPredicted RBP8.7□□□□□ -1.02
DENND4A-204ENST00000562028 LEMD3Q9Y2U8 911 aa8.7□□□□□ -1.02
DENND4A-204ENST00000562028 PRR19A6NJB7 356 aa8.69□□□□□ -1.02
DENND4A-204ENST00000562028 CLEC3AO75596 197 aa8.69□□□□□ -1.02
DENND4A-204ENST00000562028 CKAP2LQ8IYA6 745 aa8.69□□□□□ -1.02
DENND4A-204ENST00000562028 VWCEQ96DN2 955 aa8.69□□□□□ -1.02
DENND4A-204ENST00000562028 FBXL18Q96ME1 805 aa8.69□□□□□ -1.02
DENND4A-204ENST00000562028 SLC6A18Q96N87 628 aa8.69□□□□□ -1.02
DENND4A-204ENST00000562028 ASPNQ9BXN1 380 aa8.69□□□□□ -1.02
DENND4A-204ENST00000562028 TNKS2Q9H2K2 1166 aa8.69□□□□□ -1.02
DENND4A-204ENST00000562028 PHAXQ9H814 394 aaKnown RBP8.69□□□□□ -1.02
DENND4A-204ENST00000562028 ACTR10Q9NZ32 417 aa8.69□□□□□ -1.02
DENND4A-204ENST00000562028 PIM2Q9P1W9 311 aa8.69□□□□□ -1.02
DENND4A-204ENST00000562028 R3HCC1Q9Y3T6 440 aaKnown RBP8.69□□□□□ -1.02
DENND4A-204ENST00000562028 K7ELQ4 463 aaPredicted RBP8.68□□□□□ -1.02
DENND4A-204ENST00000562028 KLF4O43474 513 aa8.68□□□□□ -1.02
DENND4A-204ENST00000562028 KIR3DL1P43629 444 aa8.68□□□□□ -1.02
DENND4A-204ENST00000562028 RNF4P78317 190 aa8.68□□□□□ -1.02
DENND4A-204ENST00000562028 SOGA3Q5TF21 947 aa8.68□□□□□ -1.02
DENND4A-204ENST00000562028 NBPF6Q5VWK0 638 aa8.68□□□□□ -1.02
DENND4A-204ENST00000562028 NBPF4Q96M43 638 aa8.68□□□□□ -1.02
DENND4A-204ENST00000562028 SUCOQ9UBS9 1254 aaKnown RBP8.68□□□□□ -1.02
DENND4A-204ENST00000562028 ZNF214Q9UL59 606 aaPredicted RBP8.68□□□□□ -1.02
DENND4A-204ENST00000562028 CNTNAP4Q9C0A0 1308 aa8.68□□□□□ -1.02
DENND4A-204ENST00000562028 LTBP3Q9NS15 1303 aa8.68□□□□□ -1.02
DENND4A-204ENST00000562028 CYP26A1O43174 497 aa8.67□□□□□ -1.02
DENND4A-204ENST00000562028 ZNF865P0CJ78 1059 aaPredicted RBP8.67□□□□□ -1.02
DENND4A-204ENST00000562028 PMS1P54277 932 aaKnown RBP8.67□□□□□ -1.02
DENND4A-204ENST00000562028 BBS9Q3SYG4 887 aa8.67□□□□□ -1.02
DENND4A-204ENST00000562028 NBPF12Q5TAG4 269 aaPredicted RBP8.67□□□□□ -1.02
DENND4A-204ENST00000562028 FAM86C2PA6NEL3 165 aa8.66□□□□□ -1.02
DENND4A-204ENST00000562028 GNAT3A8MTJ3 354 aa8.66□□□□□ -1.02
DENND4A-204ENST00000562028 FOSL1P15407 271 aa8.66□□□□□ -1.02
DENND4A-204ENST00000562028 OXCT1P55809 520 aa8.66□□□□□ -1.02
DENND4A-204ENST00000562028 HNRNPLLQ8WVV9 542 aaKnown RBP8.66□□□□□ -1.02
DENND4A-204ENST00000562028 RAB33AQ14088 237 aa8.65□□□□□ -1.02
DENND4A-204ENST00000562028 FXNQ16595 210 aa8.65□□□□□ -1.02
DENND4A-204ENST00000562028 ARHGAP27Q6ZUM4 889 aa8.65□□□□□ -1.02
DENND4A-204ENST00000562028 SMARCC1Q92922 1105 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms