RNA–Protein interactions for RNA: ENST00000561680.5

CMTM4-203, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 2

Gene CMTM4, Length 618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-203ENST00000561680 CABP5Q9NP86 173 aa14.88□□□□□ -0.03
CMTM4-203ENST00000561680 GPHNQ9NQX3 736 aaPredicted RBP14.88□□□□□ -0.03
CMTM4-203ENST00000561680 FZD1Q9UP38 647 aa14.88□□□□□ -0.03
CMTM4-203ENST00000561680 PPP1R12BO60237 982 aaPredicted RBP14.87□□□□□ -0.03
CMTM4-203ENST00000561680 ITGBL1O95965 494 aaPredicted RBP14.87□□□□□ -0.03
CMTM4-203ENST00000561680 ASNSP08243 561 aa14.87□□□□□ -0.03
CMTM4-203ENST00000561680 INPP5BP32019 993 aa14.87□□□□□ -0.03
CMTM4-203ENST00000561680 SEPT2Q15019 361 aa14.87□□□□□ -0.03
CMTM4-203ENST00000561680 MAP3K11Q16584 847 aa14.87□□□□□ -0.03
CMTM4-203ENST00000561680 PPP4R3BQ5MIZ7 849 aa14.87□□□□□ -0.03
CMTM4-203ENST00000561680 NOL9Q5SY16 702 aaKnown RBP14.87□□□□□ -0.03
CMTM4-203ENST00000561680 SGMS1Q86VZ5 419 aa14.87□□□□□ -0.03
CMTM4-203ENST00000561680 DGKHQ86XP1 1220 aa14.87□□□□□ -0.03
CMTM4-203ENST00000561680 ANKS1AQ92625 1134 aa14.87□□□□□ -0.03
CMTM4-203ENST00000561680 SENP2Q9HC62 589 aa14.87□□□□□ -0.03
CMTM4-203ENST00000561680 MTMR4Q9NYA4 1195 aa14.87□□□□□ -0.03
CMTM4-203ENST00000561680 ANP32AP39687 249 aaKnown RBP14.86□□□□□ -0.03
CMTM4-203ENST00000561680 IREB2P48200 963 aaKnown RBP14.86□□□□□ -0.03
CMTM4-203ENST00000561680 MCM2P49736 904 aa14.86□□□□□ -0.03
CMTM4-203ENST00000561680 EVCP57679 992 aa14.86□□□□□ -0.03
CMTM4-203ENST00000561680 FMR1Q06787 632 aaKnown RBP eCLIP14.86□□□□□ -0.03
CMTM4-203ENST00000561680 IFIT1BQ5T764 474 aaKnown RBP14.86□□□□□ -0.03
CMTM4-203ENST00000561680 CLEC10AQ8IUN9 316 aa14.86□□□□□ -0.03
CMTM4-203ENST00000561680 SCYL3Q8IZE3 742 aa14.86□□□□□ -0.03
CMTM4-203ENST00000561680 ZNF784Q8NCA9 323 aaPredicted RBP14.86□□□□□ -0.03
CMTM4-203ENST00000561680 KANSL2Q9H9L4 492 aa14.86□□□□□ -0.03
CMTM4-203ENST00000561680 COL11A1P12107 1806 aaPredicted RBP14.86□□□□□ -0.03
CMTM4-203ENST00000561680 RLFQ13129 1914 aa14.86□□□□□ -0.03
CMTM4-203ENST00000561680 TTLL1O95922 423 aa14.85□□□□□ -0.03
CMTM4-203ENST00000561680 ICA1Q05084 483 aa14.85□□□□□ -0.03
CMTM4-203ENST00000561680 APOBRQ0VD83 1088 aa14.85□□□□□ -0.03
CMTM4-203ENST00000561680 PRKG1Q13976 671 aa14.85□□□□□ -0.03
CMTM4-203ENST00000561680 RAB3GAP1Q15042 981 aa14.85□□□□□ -0.03
CMTM4-203ENST00000561680 TMTC2Q8N394 836 aa14.85□□□□□ -0.03
CMTM4-203ENST00000561680 NYAP2Q9P242 653 aa14.85□□□□□ -0.03
CMTM4-203ENST00000561680 BRPF3Q9ULD4 1205 aa14.85□□□□□ -0.03
CMTM4-203ENST00000561680 NID2Q14112 1375 aa14.85□□□□□ -0.03
CMTM4-203ENST00000561680 KLF18A0A0U1RQI7 1052 aa14.84□□□□□ -0.03
CMTM4-203ENST00000561680 CCDC69A6NI79 296 aa14.84□□□□□ -0.03
CMTM4-203ENST00000561680 TOP1P11387 765 aaKnown RBP14.84□□□□□ -0.03
CMTM4-203ENST00000561680 FKBP1BP68106 108 aa14.84□□□□□ -0.03
CMTM4-203ENST00000561680 MAP3K9P80192 1104 aa14.84□□□□□ -0.03
CMTM4-203ENST00000561680 APOA5Q6Q788 366 aa14.84□□□□□ -0.03
CMTM4-203ENST00000561680 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.84□□□□□ -0.03
CMTM4-203ENST00000561680 NOL8Q76FK4 1167 aaKnown RBP14.84□□□□□ -0.03
CMTM4-203ENST00000561680 ARMC9Q7Z3E5 817 aa14.84□□□□□ -0.03
CMTM4-203ENST00000561680 HSCBQ8IWL3 235 aa14.84□□□□□ -0.03
CMTM4-203ENST00000561680 SMC1BQ8NDV3 1235 aa14.84□□□□□ -0.03
CMTM4-203ENST00000561680 RBM46Q8TBY0 533 aaKnown RBP14.84□□□□□ -0.03
CMTM4-203ENST00000561680 ZKSCAN4Q969J2 545 aaPredicted RBP14.84□□□□□ -0.03
CMTM4-203ENST00000561680 TMEM47Q9BQJ4 181 aa14.84□□□□□ -0.03
CMTM4-203ENST00000561680 ZNF408Q9H9D4 720 aa14.84□□□□□ -0.03
CMTM4-203ENST00000561680 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.84□□□□□ -0.03
CMTM4-203ENST00000561680 TPCN1Q9ULQ1 816 aa14.84□□□□□ -0.03
CMTM4-203ENST00000561680 STX8Q9UNK0 236 aa14.84□□□□□ -0.03
CMTM4-203ENST00000561680 LIMCH1Q9UPQ0 1083 aa14.84□□□□□ -0.03
CMTM4-203ENST00000561680 SNCAIPQ9Y6H5 919 aa14.84□□□□□ -0.03
CMTM4-203ENST00000561680 PASKQ96RG2 1323 aa14.84□□□□□ -0.03
CMTM4-203ENST00000561680 K7ELQ4 463 aaPredicted RBP14.83□□□□□ -0.04
CMTM4-203ENST00000561680 TOMM70O94826 608 aa14.83□□□□□ -0.04
CMTM4-203ENST00000561680 CELF2O95319 508 aaKnown RBP14.83□□□□□ -0.04
CMTM4-203ENST00000561680 LARGE1O95461 756 aa14.83□□□□□ -0.04
CMTM4-203ENST00000561680 EEF2P13639 858 aaKnown RBP14.83□□□□□ -0.04
CMTM4-203ENST00000561680 RCAN1P53805 252 aa14.83□□□□□ -0.04
CMTM4-203ENST00000561680 VGLL4Q14135 290 aa14.83□□□□□ -0.04
CMTM4-203ENST00000561680 TTLL12Q14166 644 aaPredicted RBP14.83□□□□□ -0.04
CMTM4-203ENST00000561680 NFXL1Q6ZNB6 911 aa14.83□□□□□ -0.04
CMTM4-203ENST00000561680 MOB2Q70IA6 237 aa14.83□□□□□ -0.04
CMTM4-203ENST00000561680 SIAH1Q8IUQ4 282 aa14.83□□□□□ -0.04
CMTM4-203ENST00000561680 ANKRD13AQ8IZ07 590 aa14.83□□□□□ -0.04
CMTM4-203ENST00000561680 ZNF654Q8IZM8 581 aa14.83□□□□□ -0.04
CMTM4-203ENST00000561680 MKL1Q969V6 931 aa14.83□□□□□ -0.04
CMTM4-203ENST00000561680 ZNF274Q96GC6 653 aaPredicted RBP14.83□□□□□ -0.04
CMTM4-203ENST00000561680 LARP6Q9BRS8 491 aaKnown RBP14.83□□□□□ -0.04
CMTM4-203ENST00000561680 TBC1D2Q9BYX2 928 aa14.83□□□□□ -0.04
CMTM4-203ENST00000561680 KAT14Q9H8E8 782 aa14.83□□□□□ -0.04
CMTM4-203ENST00000561680 GBA2Q9HCG7 927 aaPredicted RBP14.83□□□□□ -0.04
CMTM4-203ENST00000561680 SH2B1Q9NRF2 756 aaPredicted RBP14.83□□□□□ -0.04
CMTM4-203ENST00000561680 SYNPO2Q9UMS6 1093 aa14.83□□□□□ -0.04
CMTM4-203ENST00000561680 CSADQ9Y600 493 aa14.83□□□□□ -0.04
CMTM4-203ENST00000561680 SMCHD1A6NHR9 2005 aa14.83□□□□□ -0.04
CMTM4-203ENST00000561680 UNCXA6NJT0 531 aa14.82□□□□□ -0.04
CMTM4-203ENST00000561680 GOLGA8BA8MQT2 603 aa14.82□□□□□ -0.04
CMTM4-203ENST00000561680 DDAH1O94760 285 aa14.82□□□□□ -0.04
CMTM4-203ENST00000561680 PTPRAP18433 802 aa14.82□□□□□ -0.04
CMTM4-203ENST00000561680 ME3Q16798 604 aa14.82□□□□□ -0.04
CMTM4-203ENST00000561680 LDLRAD1Q5T700 205 aa14.82□□□□□ -0.04
CMTM4-203ENST00000561680 PNMA1Q8ND90 353 aa14.82□□□□□ -0.04
CMTM4-203ENST00000561680 ZSCAN31Q96LW9 406 aaPredicted RBP14.82□□□□□ -0.04
CMTM4-203ENST00000561680 ARHGEF10LQ9HCE6 1279 aa14.82□□□□□ -0.04
CMTM4-203ENST00000561680 PICK1Q9NRD5 415 aa14.82□□□□□ -0.04
CMTM4-203ENST00000561680 CLIP2Q9UDT6 1046 aa14.82□□□□□ -0.04
CMTM4-203ENST00000561680 SLC12A7Q9Y666 1083 aa14.82□□□□□ -0.04
CMTM4-203ENST00000561680 USP17L5A8MUK1 530 aa14.81□□□□□ -0.04
CMTM4-203ENST00000561680 ZBTB43O43298 467 aa14.81□□□□□ -0.04
CMTM4-203ENST00000561680 PDIA3P30101 505 aaKnown RBP14.81□□□□□ -0.04
CMTM4-203ENST00000561680 ATP2B2Q01814 1243 aa14.81□□□□□ -0.04
CMTM4-203ENST00000561680 TROAPQ12815 778 aa14.81□□□□□ -0.04
CMTM4-203ENST00000561680 BECN1Q14457 450 aa14.81□□□□□ -0.04
CMTM4-203ENST00000561680 CST9Q5W186 159 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms