RNA–Protein interactions for RNA: ENST00000561425.5

TPM1-232, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-232ENST00000561425 GNAT2P19087 354 aa24.8■■□□□ 1.56
TPM1-232ENST00000561425 USP14P54578 494 aa24.8■■□□□ 1.56
TPM1-232ENST00000561425 SIAH1Q8IUQ4 282 aa24.8■■□□□ 1.56
TPM1-232ENST00000561425 ANKRD13CQ8N6S4 541 aa24.8■■□□□ 1.56
TPM1-232ENST00000561425 ZNF333Q96JL9 665 aa24.8■■□□□ 1.56
TPM1-232ENST00000561425 P2RX7Q99572 595 aaKnown RBP24.8■■□□□ 1.56
TPM1-232ENST00000561425 ARPP21Q9UBL0 812 aaPredicted RBP24.8■■□□□ 1.56
TPM1-232ENST00000561425 NUCB1Q02818 461 aa24.79■■□□□ 1.56
TPM1-232ENST00000561425 MLLT1Q03111 559 aaPredicted RBP24.79■■□□□ 1.56
TPM1-232ENST00000561425 POTEEQ6S8J3 1075 aa24.79■■□□□ 1.56
TPM1-232ENST00000561425 TMEM179Q6ZVK1 233 aa24.79■■□□□ 1.56
TPM1-232ENST00000561425 AMOTL1Q8IY63 956 aa24.79■■□□□ 1.56
TPM1-232ENST00000561425 EVI5LQ96CN4 794 aa24.79■■□□□ 1.56
TPM1-232ENST00000561425 A0A1W2PRG0 241 aa24.78■■□□□ 1.56
TPM1-232ENST00000561425 PATL2C9JE40 543 aaKnown RBP24.78■■□□□ 1.56
TPM1-232ENST00000561425 SEC62Q99442 399 aaKnown RBP24.78■■□□□ 1.56
TPM1-232ENST00000561425 FSD1Q9BTV5 496 aa24.78■■□□□ 1.56
TPM1-232ENST00000561425 LNPKQ9C0E8 428 aa24.78■■□□□ 1.56
TPM1-232ENST00000561425 EPB41L4AQ9HCS5 686 aaPredicted RBP24.78■■□□□ 1.56
TPM1-232ENST00000561425 AKR1B1P15121 316 aa24.77■■□□□ 1.56
TPM1-232ENST00000561425 NBPF11Q86T75 865 aa24.77■■□□□ 1.56
TPM1-232ENST00000561425 CHD1LQ86WJ1 897 aa24.77■■□□□ 1.56
TPM1-232ENST00000561425 OSBPL3Q9H4L5 887 aa24.77■■□□□ 1.56
TPM1-232ENST00000561425 HERVK_113P62684 666 aa24.76■■□□□ 1.55
TPM1-232ENST00000561425 IRX3P78415 501 aaPredicted RBP24.76■■□□□ 1.55
TPM1-232ENST00000561425 SLC9C1Q4G0N8 1177 aa24.76■■□□□ 1.55
TPM1-232ENST00000561425 CATSPERGQ6ZRH7 1159 aa24.76■■□□□ 1.55
TPM1-232ENST00000561425 RBPJLQ9UBG7 517 aa24.76■■□□□ 1.55
TPM1-232ENST00000561425 MYPNQ86TC9 1320 aa24.76■■□□□ 1.55
TPM1-232ENST00000561425 ROBO3Q96MS0 1386 aa24.76■■□□□ 1.55
TPM1-232ENST00000561425 BAZ2AQ9UIF9 1905 aaKnown RBP24.75■■□□□ 1.55
TPM1-232ENST00000561425 USP17L15C9J2P7 530 aa24.75■■□□□ 1.55
TPM1-232ENST00000561425 USP17L13C9JLJ4 530 aa24.75■■□□□ 1.55
TPM1-232ENST00000561425 USP17L11C9JVI0 530 aa24.75■■□□□ 1.55
TPM1-232ENST00000561425 USP17L18D6R9N7 530 aa24.75■■□□□ 1.55
TPM1-232ENST00000561425 USP17L22D6RA61 530 aa24.75■■□□□ 1.55
TPM1-232ENST00000561425 USP17L17D6RBQ6 530 aa24.75■■□□□ 1.55
TPM1-232ENST00000561425 USP17L19D6RCP7 530 aa24.75■■□□□ 1.55
TPM1-232ENST00000561425 USP17L20D6RJB6 530 aa24.75■■□□□ 1.55
TPM1-232ENST00000561425 PRKCZQ05513 592 aa24.75■■□□□ 1.55
TPM1-232ENST00000561425 USP17L24Q0WX57 530 aa24.75■■□□□ 1.55
TPM1-232ENST00000561425 IFNL3Q8IZI9 196 aa24.75■■□□□ 1.55
TPM1-232ENST00000561425 TXNRD2Q9NNW7 524 aa24.75■■□□□ 1.55
TPM1-232ENST00000561425 GABRQQ9UN88 632 aa24.75■■□□□ 1.55
TPM1-232ENST00000561425 MPHOSPH10O00566 681 aaKnown RBP24.74■■□□□ 1.55
TPM1-232ENST00000561425 VCAM1P19320 739 aa24.74■■□□□ 1.55
TPM1-232ENST00000561425 IRF5Q13568 498 aa24.74■■□□□ 1.55
TPM1-232ENST00000561425 B4GALNT3Q6L9W6 998 aa24.74■■□□□ 1.55
TPM1-232ENST00000561425 LBX2Q6XYB7 198 aa24.74■■□□□ 1.55
TPM1-232ENST00000561425 PLEKHM2Q8IWE5 1019 aa24.74■■□□□ 1.55
TPM1-232ENST00000561425 GTF3C2Q8WUA4 911 aaPredicted RBP24.74■■□□□ 1.55
TPM1-232ENST00000561425 FEZ1Q99689 392 aa24.74■■□□□ 1.55
TPM1-232ENST00000561425 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.74■■□□□ 1.55
TPM1-232ENST00000561425 POTEFA5A3E0 1075 aa24.73■■□□□ 1.55
TPM1-232ENST00000561425 TNPO2O14787 897 aaKnown RBP24.73■■□□□ 1.55
TPM1-232ENST00000561425 FOXP2O15409 715 aa24.73■■□□□ 1.55
TPM1-232ENST00000561425 ECM2O94769 699 aaPredicted RBP24.73■■□□□ 1.55
TPM1-232ENST00000561425 GJD2Q9UKL4 321 aa24.73■■□□□ 1.55
TPM1-232ENST00000561425 TMX2Q9Y320 296 aa24.73■■□□□ 1.55
TPM1-232ENST00000561425 GRK4P32298 578 aa24.72■■□□□ 1.55
TPM1-232ENST00000561425 FLT3LGP49771 235 aa24.72■■□□□ 1.55
TPM1-232ENST00000561425 ZYXQ15942 572 aaKnown RBP24.72■■□□□ 1.55
TPM1-232ENST00000561425 RAET1EQ8TD07 263 aa24.72■■□□□ 1.55
TPM1-232ENST00000561425 SH3TC2Q8TF17 1288 aa24.72■■□□□ 1.55
TPM1-232ENST00000561425 MGAMO43451 1857 aa24.71■■□□□ 1.55
TPM1-232ENST00000561425 RASA1P20936 1047 aa24.71■■□□□ 1.55
TPM1-232ENST00000561425 Q3C1V9 767 aa24.71■■□□□ 1.55
TPM1-232ENST00000561425 KIAA1755Q5JYT7 1200 aa24.71■■□□□ 1.55
TPM1-232ENST00000561425 GPRC5AQ8NFJ5 357 aa24.71■■□□□ 1.55
TPM1-232ENST00000561425 PXYLP1Q8TE99 480 aa24.71■■□□□ 1.55
TPM1-232ENST00000561425 KANSL2Q9H9L4 492 aa24.71■■□□□ 1.55
TPM1-232ENST00000561425 HELLSQ9NRZ9 838 aa24.71■■□□□ 1.55
TPM1-232ENST00000561425 COA7Q96BR5 231 aa24.7■■□□□ 1.54
TPM1-232ENST00000561425 RABGAP1Q9Y3P9 1069 aa24.7■■□□□ 1.54
TPM1-232ENST00000561425 MINDY4BA8MYZ0 360 aa24.69■■□□□ 1.54
TPM1-232ENST00000561425 PEX10O60683 326 aa24.69■■□□□ 1.54
TPM1-232ENST00000561425 CNMDO75829 334 aa24.69■■□□□ 1.54
TPM1-232ENST00000561425 ICA1Q05084 483 aa24.69■■□□□ 1.54
TPM1-232ENST00000561425 CLEC10AQ8IUN9 316 aa24.69■■□□□ 1.54
TPM1-232ENST00000561425 SLAIN1Q8ND83 568 aa24.69■■□□□ 1.54
TPM1-232ENST00000561425 LPAR1Q92633 364 aa24.69■■□□□ 1.54
TPM1-232ENST00000561425 NACAP1Q9BZK3 213 aa24.69■■□□□ 1.54
TPM1-232ENST00000561425 RPAP3Q9H6T3 665 aaPredicted RBP24.69■■□□□ 1.54
TPM1-232ENST00000561425 APPP05067 770 aa24.68■■□□□ 1.54
TPM1-232ENST00000561425 TDO2P48775 406 aa24.68■■□□□ 1.54
TPM1-232ENST00000561425 ERVK-9P63128 1117 aa24.68■■□□□ 1.54
TPM1-232ENST00000561425 ERVK-24P63145 666 aa24.68■■□□□ 1.54
TPM1-232ENST00000561425 VCPKMTQ9H867 229 aa24.68■■□□□ 1.54
TPM1-232ENST00000561425 ARHGEF10LQ9HCE6 1279 aa24.68■■□□□ 1.54
TPM1-232ENST00000561425 IGKV6D-41A0A0C4DH26 115 aa24.67■■□□□ 1.54
TPM1-232ENST00000561425 ADCY3O60266 1144 aa24.67■■□□□ 1.54
TPM1-232ENST00000561425 EEF2P13639 858 aaKnown RBP24.67■■□□□ 1.54
TPM1-232ENST00000561425 CCDC129Q6ZRS4 1044 aa24.67■■□□□ 1.54
TPM1-232ENST00000561425 TMEM106CQ9BVX2 250 aa24.67■■□□□ 1.54
TPM1-232ENST00000561425 SH2D4AQ9H788 454 aa24.67■■□□□ 1.54
TPM1-232ENST00000561425 RBBP6Q7Z6E9 1792 aaKnown RBP24.67■■□□□ 1.54
TPM1-232ENST00000561425 SPDYE16A6NNV3 312 aaPredicted RBP24.66■■□□□ 1.54
TPM1-232ENST00000561425 COG2Q14746 738 aa24.66■■□□□ 1.54
TPM1-232ENST00000561425 MTFR1Q15390 333 aa24.66■■□□□ 1.54
TPM1-232ENST00000561425 ALX1Q15699 326 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms