RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 SPDYE5A6NIY4 337 aa12.15□□□□□ -0.46
LRRC28-221ENST00000561276 KDM4AO75164 1064 aa12.15□□□□□ -0.46
LRRC28-221ENST00000561276 ZKSCAN1P17029 563 aaPredicted RBP12.15□□□□□ -0.46
LRRC28-221ENST00000561276 GJA5P36382 358 aa12.15□□□□□ -0.46
LRRC28-221ENST00000561276 MKRN3Q13064 507 aaKnown RBP12.15□□□□□ -0.46
LRRC28-221ENST00000561276 GRM1Q13255 1194 aa12.15□□□□□ -0.46
LRRC28-221ENST00000561276 SPRYD7Q5W111 196 aa12.15□□□□□ -0.46
LRRC28-221ENST00000561276 STOX1Q6ZVD7 989 aa12.15□□□□□ -0.46
LRRC28-221ENST00000561276 NEDD1Q8NHV4 660 aa12.15□□□□□ -0.46
LRRC28-221ENST00000561276 NCOA7Q8NI08 942 aa12.15□□□□□ -0.46
LRRC28-221ENST00000561276 ESR2Q92731 530 aa12.15□□□□□ -0.46
LRRC28-221ENST00000561276 KCNB2Q92953 911 aa12.15□□□□□ -0.46
LRRC28-221ENST00000561276 OTUD5Q96G74 571 aa12.15□□□□□ -0.46
LRRC28-221ENST00000561276 WNK4Q96J92 1243 aa12.15□□□□□ -0.46
LRRC28-221ENST00000561276 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.15□□□□□ -0.46
LRRC28-221ENST00000561276 KANSL2Q9H9L4 492 aa12.15□□□□□ -0.46
LRRC28-221ENST00000561276 IL17RBQ9NRM6 502 aa12.15□□□□□ -0.46
LRRC28-221ENST00000561276 AFG3L2Q9Y4W6 797 aa12.15□□□□□ -0.46
LRRC28-221ENST00000561276 PTPRFP10586 1907 aa12.14□□□□□ -0.47
LRRC28-221ENST00000561276 FAM155AB1AL88 458 aaPredicted RBP12.14□□□□□ -0.47
LRRC28-221ENST00000561276 IRF6O14896 467 aa12.14□□□□□ -0.47
LRRC28-221ENST00000561276 NMT2O60551 498 aa12.14□□□□□ -0.47
LRRC28-221ENST00000561276 MCCP23508 829 aa12.14□□□□□ -0.47
LRRC28-221ENST00000561276 SPP2Q13103 211 aa12.14□□□□□ -0.47
LRRC28-221ENST00000561276 RASAL3Q86YV0 1011 aa12.14□□□□□ -0.47
LRRC28-221ENST00000561276 SIAH1Q8IUQ4 282 aa12.14□□□□□ -0.47
LRRC28-221ENST00000561276 SPDYE1Q8NFV5 336 aaPredicted RBP12.14□□□□□ -0.47
LRRC28-221ENST00000561276 CAPNS2Q96L46 248 aa12.14□□□□□ -0.47
LRRC28-221ENST00000561276 ZKSCAN3Q9BRR0 538 aa12.14□□□□□ -0.47
LRRC28-221ENST00000561276 BACH2Q9BYV9 841 aa12.14□□□□□ -0.47
LRRC28-221ENST00000561276 AS3MTQ9HBK9 375 aa12.14□□□□□ -0.47
LRRC28-221ENST00000561276 SNX14Q9Y5W7 946 aa12.14□□□□□ -0.47
LRRC28-221ENST00000561276 IGKV6D-41A0A0C4DH26 115 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 TRIM75PA6NK02 468 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 USP17L10C9JJH3 530 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 SLC10A3P09131 477 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 ZBTB48P10074 688 aaPredicted RBP12.13□□□□□ -0.47
LRRC28-221ENST00000561276 EEF2P13639 858 aaKnown RBP12.13□□□□□ -0.47
LRRC28-221ENST00000561276 ECE1P42892 770 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 VEGFBP49765 207 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 PPIL2Q13356 520 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 KRT32Q14532 448 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 ADCK5Q3MIX3 580 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 CYB5R4Q7L1T6 521 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 RALYLQ86SE5 291 aaKnown RBP12.13□□□□□ -0.47
LRRC28-221ENST00000561276 CLEC10AQ8IUN9 316 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 ZNF280CQ8ND82 737 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 CEP95Q96GE4 821 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 NEK1Q96PY6 1258 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 WDR18Q9BV38 432 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 TBC1D2Q9BYX2 928 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 TCP11L1Q9NUJ3 509 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 MTMR4Q9NYA4 1195 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 CLIP2Q9UDT6 1046 aa12.13□□□□□ -0.47
LRRC28-221ENST00000561276 WDR33Q9C0J8 1336 aaKnown RBP12.12□□□□□ -0.47
LRRC28-221ENST00000561276 A0A1W2PRG0 241 aa12.12□□□□□ -0.47
LRRC28-221ENST00000561276 CXCL11O14625 94 aa12.12□□□□□ -0.47
LRRC28-221ENST00000561276 NT5C2P49902 561 aa12.12□□□□□ -0.47
LRRC28-221ENST00000561276 GTF2A2P52657 109 aa12.12□□□□□ -0.47
LRRC28-221ENST00000561276 ATP2B2Q01814 1243 aa12.12□□□□□ -0.47
LRRC28-221ENST00000561276 ICA1Q05084 483 aa12.12□□□□□ -0.47
LRRC28-221ENST00000561276 CHST3Q7LGC8 479 aa12.12□□□□□ -0.47
LRRC28-221ENST00000561276 IQCA1Q86XH1 822 aa12.12□□□□□ -0.47
LRRC28-221ENST00000561276 ACER1Q8TDN7 264 aa12.12□□□□□ -0.47
LRRC28-221ENST00000561276 MS4A4AQ96JQ5 239 aa12.12□□□□□ -0.47
LRRC28-221ENST00000561276 NYAP2Q9P242 653 aa12.12□□□□□ -0.47
LRRC28-221ENST00000561276 KCNH4Q9UQ05 1017 aa12.12□□□□□ -0.47
LRRC28-221ENST00000561276 PLIN4Q96Q06 1357 aa12.11□□□□□ -0.47
LRRC28-221ENST00000561276 C19orf81C9J6K1 198 aa12.11□□□□□ -0.47
LRRC28-221ENST00000561276 AOC2O75106 756 aa12.11□□□□□ -0.47
LRRC28-221ENST00000561276 TTLL1O95922 423 aa12.11□□□□□ -0.47
LRRC28-221ENST00000561276 MCM5P33992 734 aa12.11□□□□□ -0.47
LRRC28-221ENST00000561276 BACE1P56817 501 aa12.11□□□□□ -0.47
LRRC28-221ENST00000561276 NOGQ13253 232 aa12.11□□□□□ -0.47
LRRC28-221ENST00000561276 COL9A3Q14050 684 aaPredicted RBP12.11□□□□□ -0.47
LRRC28-221ENST00000561276 MB21D2Q8IYB1 491 aaPredicted RBP12.11□□□□□ -0.47
LRRC28-221ENST00000561276 DNAJC5GQ8N7S2 189 aa12.11□□□□□ -0.47
LRRC28-221ENST00000561276 MKL1Q969V6 931 aa12.11□□□□□ -0.47
LRRC28-221ENST00000561276 JAKMIP1Q96N16 626 aaKnown RBP12.11□□□□□ -0.47
LRRC28-221ENST00000561276 TTC14Q96N46 770 aa12.11□□□□□ -0.47
LRRC28-221ENST00000561276 ZSCAN10Q96SZ4 725 aaPredicted RBP12.11□□□□□ -0.47
LRRC28-221ENST00000561276 ZIC5Q96T25 663 aa12.11□□□□□ -0.47
LRRC28-221ENST00000561276 ARHGEF10LQ9HCE6 1279 aa12.11□□□□□ -0.47
LRRC28-221ENST00000561276 STX8Q9UNK0 236 aa12.11□□□□□ -0.47
LRRC28-221ENST00000561276 HMGB1P09429 215 aaKnown RBP12.1□□□□□ -0.47
LRRC28-221ENST00000561276 CETPP11597 493 aa12.1□□□□□ -0.47
LRRC28-221ENST00000561276 PSMA5P28066 241 aa12.1□□□□□ -0.47
LRRC28-221ENST00000561276 NOVP48745 357 aa12.1□□□□□ -0.47
LRRC28-221ENST00000561276 HMGCS2P54868 508 aa12.1□□□□□ -0.47
LRRC28-221ENST00000561276 INHBEP58166 350 aa12.1□□□□□ -0.47
LRRC28-221ENST00000561276 EXOSC10Q01780 885 aaKnown RBP12.1□□□□□ -0.47
LRRC28-221ENST00000561276 KIF23Q02241 960 aaPredicted RBP12.1□□□□□ -0.47
LRRC28-221ENST00000561276 SNAPC2Q13487 334 aa12.1□□□□□ -0.47
LRRC28-221ENST00000561276 MTMR2Q13614 643 aa12.1□□□□□ -0.47
LRRC28-221ENST00000561276 ZYXQ15942 572 aaKnown RBP12.1□□□□□ -0.47
LRRC28-221ENST00000561276 CCDC178Q5BJE1 867 aa12.1□□□□□ -0.47
LRRC28-221ENST00000561276 PPP4R3BQ5MIZ7 849 aa12.1□□□□□ -0.47
LRRC28-221ENST00000561276 RCSD1Q6JBY9 416 aa12.1□□□□□ -0.47
LRRC28-221ENST00000561276 DGKHQ86XP1 1220 aa12.1□□□□□ -0.47
LRRC28-221ENST00000561276 UBAC1Q9BSL1 405 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms