RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 HMGCS2P54868 508 aa12.61□□□□□ -0.39
TPM1-229ENST00000561242 GABPAQ06546 454 aa12.61□□□□□ -0.39
TPM1-229ENST00000561242 FAM47AQ5JRC9 791 aa12.61□□□□□ -0.39
TPM1-229ENST00000561242 NFXL1Q6ZNB6 911 aa12.61□□□□□ -0.39
TPM1-229ENST00000561242 ANKRD23Q86SG2 305 aa12.61□□□□□ -0.39
TPM1-229ENST00000561242 SKAP1Q86WV1 359 aa12.61□□□□□ -0.39
TPM1-229ENST00000561242 STAG1Q8WVM7 1258 aa12.61□□□□□ -0.39
TPM1-229ENST00000561242 LPAR1Q92633 364 aa12.61□□□□□ -0.39
TPM1-229ENST00000561242 TANGO6Q9C0B7 1094 aa12.61□□□□□ -0.39
TPM1-229ENST00000561242 KAT14Q9H8E8 782 aa12.61□□□□□ -0.39
TPM1-229ENST00000561242 ZCCHC17Q9NP64 241 aaKnown RBP12.61□□□□□ -0.39
TPM1-229ENST00000561242 SAGE1Q9NXZ1 904 aa12.61□□□□□ -0.39
TPM1-229ENST00000561242 FAM155AB1AL88 458 aaPredicted RBP12.6□□□□□ -0.39
TPM1-229ENST00000561242 USP17L15C9J2P7 530 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 USP17L13C9JLJ4 530 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 USP17L11C9JVI0 530 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 USP17L18D6R9N7 530 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 USP17L22D6RA61 530 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 USP17L17D6RBQ6 530 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 USP17L19D6RCP7 530 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 USP17L20D6RJB6 530 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 PDHXO00330 501 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 ORC4O43929 436 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 USP17L24Q0WX57 530 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 TMTC2Q8N394 836 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 DNAJC5GQ8N7S2 189 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 NEDD1Q8NHV4 660 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 MAP4K1Q92918 833 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 TTC14Q96N46 770 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 HOXC10Q9NYD6 342 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 AGTPBP1Q9UPW5 1226 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 KCNH4Q9UQ05 1017 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 MTMR7Q9Y216 660 aa12.6□□□□□ -0.39
TPM1-229ENST00000561242 ADAMTSL1Q8N6G6 1762 aa12.59□□□□□ -0.39
TPM1-229ENST00000561242 A0A0G2JLL6 359 aaPredicted RBP12.59□□□□□ -0.39
TPM1-229ENST00000561242 IFIT3O14879 490 aaKnown RBP12.59□□□□□ -0.39
TPM1-229ENST00000561242 KDM4AO75164 1064 aa12.59□□□□□ -0.39
TPM1-229ENST00000561242 HSPA1AP0DMV8 641 aaKnown RBP12.59□□□□□ -0.39
TPM1-229ENST00000561242 HSPA1BP0DMV9 641 aaKnown RBP12.59□□□□□ -0.39
TPM1-229ENST00000561242 EEF2P13639 858 aaKnown RBP12.59□□□□□ -0.39
TPM1-229ENST00000561242 RASA1P20936 1047 aa12.59□□□□□ -0.39
TPM1-229ENST00000561242 HOXD10P28358 340 aa12.59□□□□□ -0.39
TPM1-229ENST00000561242 CCDC96Q2M329 555 aa12.59□□□□□ -0.39
TPM1-229ENST00000561242 IFIT1BQ5T764 474 aaKnown RBP12.59□□□□□ -0.39
TPM1-229ENST00000561242 PRRT2Q7Z6L0 340 aaPredicted RBP12.59□□□□□ -0.39
TPM1-229ENST00000561242 CNKSR2Q8WXI2 1034 aa12.59□□□□□ -0.39
TPM1-229ENST00000561242 KIAA1683Q9H0B3 1180 aa12.59□□□□□ -0.39
TPM1-229ENST00000561242 RNF186Q9NXI6 227 aa12.59□□□□□ -0.39
TPM1-229ENST00000561242 NYAP2Q9P242 653 aa12.59□□□□□ -0.39
TPM1-229ENST00000561242 NAP1L2Q9ULW6 460 aaPredicted RBP12.59□□□□□ -0.39
TPM1-229ENST00000561242 GOLGB1Q14789 3259 aaKnown RBP12.59□□□□□ -0.39
TPM1-229ENST00000561242 MAST2Q6P0Q8 1798 aa12.58□□□□□ -0.39
TPM1-229ENST00000561242 CCDC69A6NI79 296 aa12.58□□□□□ -0.4
TPM1-229ENST00000561242 EPB41L2O43491 1005 aaKnown RBP12.58□□□□□ -0.4
TPM1-229ENST00000561242 DHX16O60231 1041 aaKnown RBP12.58□□□□□ -0.4
TPM1-229ENST00000561242 TOP1P11387 765 aaKnown RBP12.58□□□□□ -0.4
TPM1-229ENST00000561242 MCM5P33992 734 aa12.58□□□□□ -0.4
TPM1-229ENST00000561242 SLC1A4P43007 532 aa12.58□□□□□ -0.4
TPM1-229ENST00000561242 GCLCP48506 637 aaPredicted RBP12.58□□□□□ -0.4
TPM1-229ENST00000561242 CCNA1P78396 465 aa12.58□□□□□ -0.4
TPM1-229ENST00000561242 PTH1RQ03431 593 aa12.58□□□□□ -0.4
TPM1-229ENST00000561242 CREB3L3Q68CJ9 461 aa12.58□□□□□ -0.4
TPM1-229ENST00000561242 JMYQ8N9B5 988 aa12.58□□□□□ -0.4
TPM1-229ENST00000561242 CHURC1Q8WUH1 139 aa12.58□□□□□ -0.4
TPM1-229ENST00000561242 DNAJC18Q9H819 358 aa12.58□□□□□ -0.4
TPM1-229ENST00000561242 WBP1LQ9NX94 342 aa12.58□□□□□ -0.4
TPM1-229ENST00000561242 SYNPO2Q9UMS6 1093 aa12.58□□□□□ -0.4
TPM1-229ENST00000561242 SLC45A1Q9Y2W3 748 aa12.58□□□□□ -0.4
TPM1-229ENST00000561242 AK9Q5TCS8 1911 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 TESPA1A2RU30 521 aaPredicted RBP12.57□□□□□ -0.4
TPM1-229ENST00000561242 B4E1Z4 1266 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 BTBD19C9JJ37 291 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 FKTNO75072 461 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 ZBED4O75132 1171 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 TBC1D8O95759 1140 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 SLURP2P0DP57 97 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 WTAPQ15007 396 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 SH3D19Q5HYK7 790 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 WDR78Q5VTH9 848 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 SLFN13Q68D06 897 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 CATIPQ7Z7H3 387 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 CCDC84Q86UT8 332 aaPredicted RBP12.57□□□□□ -0.4
TPM1-229ENST00000561242 DGKHQ86XP1 1220 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 BRI3BPQ8WY22 251 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 CEP95Q96GE4 821 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 ERO1AQ96HE7 468 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 NEK1Q96PY6 1258 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 ZSCAN10Q96SZ4 725 aaPredicted RBP12.57□□□□□ -0.4
TPM1-229ENST00000561242 RPAP3Q9H6T3 665 aaPredicted RBP12.57□□□□□ -0.4
TPM1-229ENST00000561242 VCPKMTQ9H867 229 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 MTMR4Q9NYA4 1195 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 TMX2Q9Y320 296 aa12.57□□□□□ -0.4
TPM1-229ENST00000561242 ROBO3Q96MS0 1386 aa12.56□□□□□ -0.4
TPM1-229ENST00000561242 AKAP11Q9UKA4 1901 aa12.56□□□□□ -0.4
TPM1-229ENST00000561242 E7EWF7 191 aa12.56□□□□□ -0.4
TPM1-229ENST00000561242 F5H6K3 240 aa12.56□□□□□ -0.4
TPM1-229ENST00000561242 WDR46O15213 610 aaKnown RBP12.56□□□□□ -0.4
TPM1-229ENST00000561242 FLOT1O75955 427 aa12.56□□□□□ -0.4
TPM1-229ENST00000561242 FMNL1O95466 1100 aaPredicted RBP12.56□□□□□ -0.4
TPM1-229ENST00000561242 KLRC3Q07444 240 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms