RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 DNM1LO00429 736 aa22.72■■□□□ 1.23
TPM1-226ENST00000560959 CATSPERGQ6ZRH7 1159 aa22.72■■□□□ 1.23
TPM1-226ENST00000560959 ADGRA1Q86SQ6 560 aa22.72■■□□□ 1.23
TPM1-226ENST00000560959 SIPA1L1O43166 1804 aa22.72■■□□□ 1.23
TPM1-226ENST00000560959 GH2P01242 217 aa22.71■■□□□ 1.23
TPM1-226ENST00000560959 IGHA2P01877 340 aa22.71■■□□□ 1.23
TPM1-226ENST00000560959 CYP2E1P05181 493 aaPredicted RBP22.71■■□□□ 1.23
TPM1-226ENST00000560959 TTC39AQ5SRH9 613 aa22.71■■□□□ 1.23
TPM1-226ENST00000560959 KIAA1683Q9H0B3 1180 aa22.71■■□□□ 1.23
TPM1-226ENST00000560959 FLRT1Q9NZU1 646 aa22.71■■□□□ 1.23
TPM1-226ENST00000560959 PRKAG2Q9UGJ0 569 aa22.71■■□□□ 1.23
TPM1-226ENST00000560959 ATP2B2Q01814 1243 aa22.7■■□□□ 1.22
TPM1-226ENST00000560959 GRB14Q14449 540 aa22.7■■□□□ 1.22
TPM1-226ENST00000560959 SNRKQ9NRH2 765 aa22.7■■□□□ 1.22
TPM1-226ENST00000560959 IVNS1ABPQ9Y6Y0 642 aa22.7■■□□□ 1.22
TPM1-226ENST00000560959 PNMA6EA0A0J9YXQ4 647 aa22.69■■□□□ 1.22
TPM1-226ENST00000560959 ZNF697Q5TEC3 545 aa22.69■■□□□ 1.22
TPM1-226ENST00000560959 TMED8Q6PL24 325 aaPredicted RBP22.69■■□□□ 1.22
TPM1-226ENST00000560959 EHD4Q9H223 541 aa22.69■■□□□ 1.22
TPM1-226ENST00000560959 IPO8O15397 1037 aaKnown RBP22.68■■□□□ 1.22
TPM1-226ENST00000560959 TNNI3KQ59H18 835 aa22.68■■□□□ 1.22
TPM1-226ENST00000560959 ARRDC4Q8NCT1 418 aa22.68■■□□□ 1.22
TPM1-226ENST00000560959 FEZ1Q99689 392 aa22.68■■□□□ 1.22
TPM1-226ENST00000560959 SAP30BPQ9UHR5 308 aaKnown RBP22.68■■□□□ 1.22
TPM1-226ENST00000560959 SERPINB13Q9UIV8 391 aa22.68■■□□□ 1.22
TPM1-226ENST00000560959 FPGT-TNNI3KV9GXZ4 949 aa22.68■■□□□ 1.22
TPM1-226ENST00000560959 VCANP13611 3396 aa22.67■■□□□ 1.22
TPM1-226ENST00000560959 STRNO43815 780 aa22.66■■□□□ 1.22
TPM1-226ENST00000560959 VCAM1P19320 739 aa22.66■■□□□ 1.22
TPM1-226ENST00000560959 CNGA1P29973 690 aa22.66■■□□□ 1.22
TPM1-226ENST00000560959 ATN1P54259 1190 aaPredicted RBP22.66■■□□□ 1.22
TPM1-226ENST00000560959 RTP1P59025 263 aa22.66■■□□□ 1.22
TPM1-226ENST00000560959 WDR78Q5VTH9 848 aa22.66■■□□□ 1.22
TPM1-226ENST00000560959 OLFML2BQ68BL8 750 aa22.66■■□□□ 1.22
TPM1-226ENST00000560959 NPLOC4Q8TAT6 608 aa22.66■■□□□ 1.22
TPM1-226ENST00000560959 DBNDD2Q9BQY9 259 aa22.66■■□□□ 1.22
TPM1-226ENST00000560959 BTBD7Q9P203 1132 aa22.66■■□□□ 1.22
TPM1-226ENST00000560959 CYBAP13498 195 aa22.65■■□□□ 1.22
TPM1-226ENST00000560959 ZAP70P43403 619 aa22.65■■□□□ 1.22
TPM1-226ENST00000560959 POLA2Q14181 598 aa22.65■■□□□ 1.22
TPM1-226ENST00000560959 CERKLQ49MI3 558 aaPredicted RBP22.65■■□□□ 1.22
TPM1-226ENST00000560959 SLC39A5Q6ZMH5 540 aa22.65■■□□□ 1.22
TPM1-226ENST00000560959 TTC6Q86TZ1 520 aa22.65■■□□□ 1.22
TPM1-226ENST00000560959 SEMA6BQ9H3T3 888 aa22.65■■□□□ 1.22
TPM1-226ENST00000560959 NDUFB9Q9Y6M9 179 aa22.65■■□□□ 1.22
TPM1-226ENST00000560959 SPDYE16A6NNV3 312 aaPredicted RBP22.64■■□□□ 1.21
TPM1-226ENST00000560959 CYP7A1P22680 504 aa22.64■■□□□ 1.21
TPM1-226ENST00000560959 CYP2C19P33261 490 aa22.64■■□□□ 1.21
TPM1-226ENST00000560959 DYNLL1P63167 89 aaKnown RBP22.64■■□□□ 1.21
TPM1-226ENST00000560959 RAB3GAP1Q15042 981 aa22.64■■□□□ 1.21
TPM1-226ENST00000560959 ZYXQ15942 572 aaKnown RBP22.64■■□□□ 1.21
TPM1-226ENST00000560959 ABCB5Q2M3G0 1257 aa22.64■■□□□ 1.21
TPM1-226ENST00000560959 TRPV1Q8NER1 839 aa22.64■■□□□ 1.21
TPM1-226ENST00000560959 FAM161BQ96MY7 647 aa22.64■■□□□ 1.21
TPM1-226ENST00000560959 CDX2Q99626 313 aaPredicted RBP22.64■■□□□ 1.21
TPM1-226ENST00000560959 CABP5Q9NP86 173 aa22.64■■□□□ 1.21
TPM1-226ENST00000560959 PIH1D3Q9NQM4 214 aaKnown RBP22.64■■□□□ 1.21
TPM1-226ENST00000560959 HOXC10Q9NYD6 342 aa22.64■■□□□ 1.21
TPM1-226ENST00000560959 FOCADQ5VW36 1801 aa22.64■■□□□ 1.21
TPM1-226ENST00000560959 MAST2Q6P0Q8 1798 aa22.63■■□□□ 1.21
TPM1-226ENST00000560959 TRIM27P14373 513 aa22.63■■□□□ 1.21
TPM1-226ENST00000560959 USP5P45974 858 aa22.63■■□□□ 1.21
TPM1-226ENST00000560959 SMAD3P84022 425 aaKnown RBP22.63■■□□□ 1.21
TPM1-226ENST00000560959 SNX17Q15036 470 aa22.63■■□□□ 1.21
TPM1-226ENST00000560959 C1orf53Q5VUE5 145 aa22.63■■□□□ 1.21
TPM1-226ENST00000560959 SHHQ15465 462 aa22.62■■□□□ 1.21
TPM1-226ENST00000560959 DPP9Q86TI2 863 aa22.62■■□□□ 1.21
TPM1-226ENST00000560959 ACER1Q8TDN7 264 aa22.62■■□□□ 1.21
TPM1-226ENST00000560959 SSH3Q8TE77 659 aa22.62■■□□□ 1.21
TPM1-226ENST00000560959 RPAP3Q9H6T3 665 aaPredicted RBP22.62■■□□□ 1.21
TPM1-226ENST00000560959 ATP11BQ9Y2G3 1177 aa22.62■■□□□ 1.21
TPM1-226ENST00000560959 EYSQ5T1H1 3165 aa22.61■■□□□ 1.21
TPM1-226ENST00000560959 KBTBD13C9JR72 458 aa22.61■■□□□ 1.21
TPM1-226ENST00000560959 SEPT4O43236 478 aa22.61■■□□□ 1.21
TPM1-226ENST00000560959 COG2Q14746 738 aa22.61■■□□□ 1.21
TPM1-226ENST00000560959 GJC2Q5T442 439 aaPredicted RBP22.61■■□□□ 1.21
TPM1-226ENST00000560959 SHCBP1Q8NEM2 672 aa22.61■■□□□ 1.21
TPM1-226ENST00000560959 SLC5A4Q9NY91 659 aa22.61■■□□□ 1.21
TPM1-226ENST00000560959 CDK5RAP2Q96SN8 1893 aa22.6■■□□□ 1.21
TPM1-226ENST00000560959 FRMPD3Q5JV73 1810 aa22.6■■□□□ 1.21
TPM1-226ENST00000560959 ADORA2AP29274 412 aa22.6■■□□□ 1.21
TPM1-226ENST00000560959 ATP8B2P98198 1209 aa22.6■■□□□ 1.21
TPM1-226ENST00000560959 SHMT1P34896 483 aa22.59■■□□□ 1.21
TPM1-226ENST00000560959 OS9Q13438 667 aaPredicted RBP22.59■■□□□ 1.21
TPM1-226ENST00000560959 ABRAQ8N0Z2 381 aa22.59■■□□□ 1.21
TPM1-226ENST00000560959 MIGA1Q8NAN2 632 aa22.59■■□□□ 1.21
TPM1-226ENST00000560959 MAFAQ8NHW3 353 aaPredicted RBP22.59■■□□□ 1.21
TPM1-226ENST00000560959 MOV10L1Q9BXT6 1211 aaKnown RBP22.59■■□□□ 1.21
TPM1-226ENST00000560959 NOP58Q9Y2X3 529 aaKnown RBP22.59■■□□□ 1.21
TPM1-226ENST00000560959 SPTBN5Q9NRC6 3674 aaKnown RBP22.59■■□□□ 1.21
TPM1-226ENST00000560959 SURF6O75683 361 aaKnown RBP22.58■■□□□ 1.21
TPM1-226ENST00000560959 IDH1O75874 414 aaKnown RBP22.58■■□□□ 1.21
TPM1-226ENST00000560959 GUCY1A2P33402 732 aa22.58■■□□□ 1.21
TPM1-226ENST00000560959 C9orf50Q5SZB4 431 aa22.58■■□□□ 1.21
TPM1-226ENST00000560959 MB21D1Q8N884 522 aa22.58■■□□□ 1.21
TPM1-226ENST00000560959 BADQ92934 168 aa22.58■■□□□ 1.21
TPM1-226ENST00000560959 SPATC1LQ9H0A9 340 aa22.58■■□□□ 1.21
TPM1-226ENST00000560959 DBNLQ9UJU6 430 aaKnown RBP22.58■■□□□ 1.21
TPM1-226ENST00000560959 TMEM265A0A087WTH1 108 aa22.57■■□□□ 1.2
TPM1-226ENST00000560959 GABPAQ06546 454 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms