RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 PORCNQ9H237 461 aa21.68■■□□□ 1.06
RPL28-210ENST00000560583 PARP14Q460N5 1801 aa21.68■■□□□ 1.06
RPL28-210ENST00000560583 CYP2D6P10635 497 aa21.67■■□□□ 1.06
RPL28-210ENST00000560583 ERVK-9P63128 1117 aa21.67■■□□□ 1.06
RPL28-210ENST00000560583 ERVK-24P63145 666 aa21.67■■□□□ 1.06
RPL28-210ENST00000560583 Q3C1V9 767 aa21.67■■□□□ 1.06
RPL28-210ENST00000560583 GPRC5AQ8NFJ5 357 aa21.67■■□□□ 1.06
RPL28-210ENST00000560583 FEZ1Q99689 392 aa21.67■■□□□ 1.06
RPL28-210ENST00000560583 KIAA1683Q9H0B3 1180 aa21.67■■□□□ 1.06
RPL28-210ENST00000560583 BOLA2Q9H3K6 86 aa21.67■■□□□ 1.06
RPL28-210ENST00000560583 DCP1AQ9NPI6 582 aaPredicted RBP21.67■■□□□ 1.06
RPL28-210ENST00000560583 PAG1Q9NWQ8 432 aa21.67■■□□□ 1.06
RPL28-210ENST00000560583 CNMDO75829 334 aa21.66■■□□□ 1.06
RPL28-210ENST00000560583 ATP5JP18859 108 aa21.66■■□□□ 1.06
RPL28-210ENST00000560583 VCAM1P19320 739 aa21.66■■□□□ 1.06
RPL28-210ENST00000560583 ADD2P35612 726 aa21.66■■□□□ 1.06
RPL28-210ENST00000560583 PAGR1Q9BTK6 254 aa21.66■■□□□ 1.06
RPL28-210ENST00000560583 ARMT1Q9H993 441 aa21.66■■□□□ 1.06
RPL28-210ENST00000560583 MCM9Q9NXL9 1143 aa21.66■■□□□ 1.06
RPL28-210ENST00000560583 POLR3DP05423 398 aaPredicted RBP21.65■■□□□ 1.06
RPL28-210ENST00000560583 CYP2B6P20813 491 aa21.65■■□□□ 1.06
RPL28-210ENST00000560583 FXR1P51114 621 aaKnown RBP eCLIP21.65■■□□□ 1.06
RPL28-210ENST00000560583 PDE3AQ14432 1141 aa21.65■■□□□ 1.06
RPL28-210ENST00000560583 SLC44A5Q8NCS7 719 aa21.65■■□□□ 1.06
RPL28-210ENST00000560583 GTF3C2Q8WUA4 911 aaPredicted RBP21.65■■□□□ 1.06
RPL28-210ENST00000560583 DPF3Q92784 378 aa21.65■■□□□ 1.06
RPL28-210ENST00000560583 HAUS7Q99871 368 aa21.65■■□□□ 1.06
RPL28-210ENST00000560583 RANBP2P49792 3224 aaKnown RBP21.65■■□□□ 1.06
RPL28-210ENST00000560583 PRKAB2O43741 272 aa21.64■■□□□ 1.05
RPL28-210ENST00000560583 SMARCA5O60264 1052 aaPredicted RBP21.64■■□□□ 1.05
RPL28-210ENST00000560583 MBD4O95243 580 aa21.64■■□□□ 1.05
RPL28-210ENST00000560583 SEPT2Q15019 361 aa21.64■■□□□ 1.05
RPL28-210ENST00000560583 DIS3LQ8TF46 1054 aaKnown RBP21.64■■□□□ 1.05
RPL28-210ENST00000560583 SOCS4Q8WXH5 440 aa21.64■■□□□ 1.05
RPL28-210ENST00000560583 USP6NLQ92738 828 aa21.64■■□□□ 1.05
RPL28-210ENST00000560583 HTATIP2Q9BUP3 242 aa21.64■■□□□ 1.05
RPL28-210ENST00000560583 CHMP4BQ9H444 224 aaKnown RBP21.64■■□□□ 1.05
RPL28-210ENST00000560583 A0A1W2PRG0 241 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 USP17L15C9J2P7 530 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 USP17L13C9JLJ4 530 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 USP17L11C9JVI0 530 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 USP17L18D6R9N7 530 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 USP17L22D6RA61 530 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 USP17L17D6RBQ6 530 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 USP17L19D6RCP7 530 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 USP17L20D6RJB6 530 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 SMIM22K7EJ46 135 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 TFRCP02786 760 aaKnown RBP21.63■■□□□ 1.05
RPL28-210ENST00000560583 MAPK4P31152 587 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 USP14P54578 494 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 USP17L24Q0WX57 530 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 MAP3K21Q5TCX8 1036 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 CATSPERGQ6ZRH7 1159 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 GPR142Q7Z601 462 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 CABP5Q9NP86 173 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 PCDH10Q9P2E7 1040 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 ZNF236Q9UL36 1845 aa21.63■■□□□ 1.05
RPL28-210ENST00000560583 GREB1LQ9C091 1923 aaPredicted RBP21.63■■□□□ 1.05
RPL28-210ENST00000560583 RPTORQ8N122 1335 aa21.62■■□□□ 1.05
RPL28-210ENST00000560583 MORN1Q5T089 497 aa21.62■■□□□ 1.05
RPL28-210ENST00000560583 CHRDL2Q6WN34 429 aa21.62■■□□□ 1.05
RPL28-210ENST00000560583 NUDT12Q9BQG2 462 aa21.62■■□□□ 1.05
RPL28-210ENST00000560583 LRRCC1Q9C099 1032 aa21.62■■□□□ 1.05
RPL28-210ENST00000560583 RABGAP1Q9Y3P9 1069 aa21.62■■□□□ 1.05
RPL28-210ENST00000560583 SPDYE16A6NNV3 312 aaPredicted RBP21.61■■□□□ 1.05
RPL28-210ENST00000560583 XRCC5P13010 732 aaKnown RBP21.61■■□□□ 1.05
RPL28-210ENST00000560583 MNX1P50219 401 aaPredicted RBP21.61■■□□□ 1.05
RPL28-210ENST00000560583 LBX2Q6XYB7 198 aa21.61■■□□□ 1.05
RPL28-210ENST00000560583 DYNLL2Q96FJ2 89 aa21.61■■□□□ 1.05
RPL28-210ENST00000560583 RPAP3Q9H6T3 665 aaPredicted RBP21.61■■□□□ 1.05
RPL28-210ENST00000560583 PRKAR2AP13861 404 aaKnown RBP21.6■■□□□ 1.05
RPL28-210ENST00000560583 CAPN2P17655 700 aa21.6■■□□□ 1.05
RPL28-210ENST00000560583 CCL14Q16627 93 aa21.6■■□□□ 1.05
RPL28-210ENST00000560583 PLEKHH3Q7Z736 793 aa21.6■■□□□ 1.05
RPL28-210ENST00000560583 CLEC10AQ8IUN9 316 aa21.6■■□□□ 1.05
RPL28-210ENST00000560583 PAWRQ96IZ0 340 aaKnown RBP21.6■■□□□ 1.05
RPL28-210ENST00000560583 PRO3102Q9H379 93 aa21.6■■□□□ 1.05
RPL28-210ENST00000560583 HMX1Q9NP08 348 aaPredicted RBP21.6■■□□□ 1.05
RPL28-210ENST00000560583 BTBD7Q9P203 1132 aa21.6■■□□□ 1.05
RPL28-210ENST00000560583 CYP2D7A0A087X1C5 515 aa21.59■■□□□ 1.05
RPL28-210ENST00000560583 UBE3CQ15386 1083 aa21.59■■□□□ 1.05
RPL28-210ENST00000560583 KIAA1755Q5JYT7 1200 aa21.59■■□□□ 1.05
RPL28-210ENST00000560583 APBA2Q99767 749 aa21.59■■□□□ 1.05
RPL28-210ENST00000560583 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.59■■□□□ 1.05
RPL28-210ENST00000560583 COL11A1P12107 1806 aaPredicted RBP21.59■■□□□ 1.05
RPL28-210ENST00000560583 MPHOSPH10O00566 681 aaKnown RBP21.58■■□□□ 1.05
RPL28-210ENST00000560583 AKR1B1P15121 316 aa21.58■■□□□ 1.05
RPL28-210ENST00000560583 ZKSCAN1P17029 563 aaPredicted RBP21.58■■□□□ 1.05
RPL28-210ENST00000560583 RGS2P41220 211 aa21.58■■□□□ 1.05
RPL28-210ENST00000560583 YTHDC1Q96MU7 727 aaKnown RBP21.58■■□□□ 1.05
RPL28-210ENST00000560583 ATP8A2Q9NTI2 1148 aa21.58■■□□□ 1.05
RPL28-210ENST00000560583 RBM27Q9P2N5 1060 aaKnown RBP21.58■■□□□ 1.05
RPL28-210ENST00000560583 SWAP70Q9UH65 585 aa21.58■■□□□ 1.05
RPL28-210ENST00000560583 CACNB2Q08289 660 aaPredicted RBP21.57■■□□□ 1.04
RPL28-210ENST00000560583 C12orf60Q5U649 245 aa21.57■■□□□ 1.04
RPL28-210ENST00000560583 TMEM179Q6ZVK1 233 aa21.57■■□□□ 1.04
RPL28-210ENST00000560583 SIAH1Q8IUQ4 282 aa21.57■■□□□ 1.04
RPL28-210ENST00000560583 ANKLE1Q8NAG6 615 aa21.57■■□□□ 1.04
RPL28-210ENST00000560583 PUS7LQ9H0K6 701 aaKnown RBP21.57■■□□□ 1.04
RPL28-210ENST00000560583 OGDHLQ9ULD0 1010 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms