RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 SLC44A5Q8NCS7 719 aa8.42□□□□□ -1.06
HERC1-208ENST00000560462 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.42□□□□□ -1.06
HERC1-208ENST00000560462 FERMT2Q96AC1 680 aa8.42□□□□□ -1.06
HERC1-208ENST00000560462 TRAIPQ9BWF2 469 aa8.42□□□□□ -1.06
HERC1-208ENST00000560462 UBE2ZQ9H832 354 aaPredicted RBP8.42□□□□□ -1.06
HERC1-208ENST00000560462 CD209Q9NNX6 404 aa8.42□□□□□ -1.06
HERC1-208ENST00000560462 TLR9Q9NR96 1032 aa8.42□□□□□ -1.06
HERC1-208ENST00000560462 LEMD3Q9Y2U8 911 aa8.42□□□□□ -1.06
HERC1-208ENST00000560462 AK9Q5TCS8 1911 aa8.42□□□□□ -1.06
HERC1-208ENST00000560462 PQBP1O60828 265 aaKnown RBP8.41□□□□□ -1.06
HERC1-208ENST00000560462 HSP90B1P14625 803 aaKnown RBP8.41□□□□□ -1.06
HERC1-208ENST00000560462 PLCG2P16885 1265 aa8.41□□□□□ -1.06
HERC1-208ENST00000560462 IRS1P35568 1242 aa8.41□□□□□ -1.06
HERC1-208ENST00000560462 RGS2P41220 211 aa8.41□□□□□ -1.06
HERC1-208ENST00000560462 NOL9Q5SY16 702 aaKnown RBP8.41□□□□□ -1.06
HERC1-208ENST00000560462 ZNF365Q70YC5 407 aa8.41□□□□□ -1.06
HERC1-208ENST00000560462 BANK1Q8NDB2 785 aa8.41□□□□□ -1.06
HERC1-208ENST00000560462 CCDC85AQ96PX6 553 aaPredicted RBP8.41□□□□□ -1.06
HERC1-208ENST00000560462 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.41□□□□□ -1.06
HERC1-208ENST00000560462 MTIF3Q9H2K0 278 aaKnown RBP8.41□□□□□ -1.06
HERC1-208ENST00000560462 AGTPBP1Q9UPW5 1226 aa8.41□□□□□ -1.06
HERC1-208ENST00000560462 ZHX2Q9Y6X8 837 aa8.41□□□□□ -1.06
HERC1-208ENST00000560462 PLXNB2O15031 1838 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 UTYO14607 1347 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 ZNF536O15090 1300 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 TMEM221A6NGB7 291 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 M0R296 226 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 ATMINO43313 823 aaPredicted RBP8.4□□□□□ -1.06
HERC1-208ENST00000560462 TIMP1P01033 207 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 ANXA1P04083 346 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 KCNA5P22460 613 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 NBL1P41271 181 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 RABGGTBP53611 331 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 CACNB3P54284 484 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 EIF4A1P60842 406 aaKnown RBP8.4□□□□□ -1.06
HERC1-208ENST00000560462 DCTN1Q14203 1278 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 MFSD14CQ5VZR4 134 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 MFSD5Q6N075 450 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 FBXL6Q8N531 539 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 XAGE3Q8WTP9 111 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 EDAQ92838 391 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 NKD2Q969F2 451 aaPredicted RBP8.4□□□□□ -1.06
HERC1-208ENST00000560462 CCDC97Q96F63 343 aaPredicted RBP8.4□□□□□ -1.06
HERC1-208ENST00000560462 PHACTR3Q96KR7 559 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 APBA2Q99767 749 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 FAM217BQ9NTX9 383 aaPredicted RBP8.4□□□□□ -1.06
HERC1-208ENST00000560462 ZNF112Q9UJU3 913 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 JAG2Q9Y219 1238 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 PCDHA11Q9Y5I1 949 aa8.4□□□□□ -1.06
HERC1-208ENST00000560462 GCN1Q92616 2671 aaKnown RBP8.39□□□□□ -1.07
HERC1-208ENST00000560462 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.39□□□□□ -1.07
HERC1-208ENST00000560462 U2SURPO15042 1029 aaKnown RBP8.39□□□□□ -1.07
HERC1-208ENST00000560462 OATP04181 439 aa8.39□□□□□ -1.07
HERC1-208ENST00000560462 ACRP10323 421 aa8.39□□□□□ -1.07
HERC1-208ENST00000560462 MYOGP15173 224 aa8.39□□□□□ -1.07
HERC1-208ENST00000560462 EIF4G2P78344 907 aaKnown RBP eCLIP8.39□□□□□ -1.074e-7■■■■■ 27
HERC1-208ENST00000560462 ZP2Q05996 745 aa8.39□□□□□ -1.07
HERC1-208ENST00000560462 DIXDC1Q155Q3 683 aa8.39□□□□□ -1.07
HERC1-208ENST00000560462 PUS10Q3MIT2 529 aaKnown RBP8.39□□□□□ -1.07
HERC1-208ENST00000560462 HERC4Q5GLZ8 1057 aaPredicted RBP8.39□□□□□ -1.07
HERC1-208ENST00000560462 FAM83AQ86UY5 434 aa8.39□□□□□ -1.07
HERC1-208ENST00000560462 KCTD17Q8N5Z5 321 aa8.39□□□□□ -1.07
HERC1-208ENST00000560462 CDC5LQ99459 802 aaKnown RBP8.39□□□□□ -1.07
HERC1-208ENST00000560462 CERS4Q9HA82 394 aa8.39□□□□□ -1.07
HERC1-208ENST00000560462 CDHR5Q9HBB8 845 aa8.39□□□□□ -1.07
HERC1-208ENST00000560462 MUTYHQ9UIF7 546 aa8.39□□□□□ -1.07
HERC1-208ENST00000560462 EPOPA6NHQ4 379 aa8.38□□□□□ -1.07
HERC1-208ENST00000560462 ATP5J2-PTCD1G3V325 749 aa8.38□□□□□ -1.07
HERC1-208ENST00000560462 MAP3K7O43318 606 aa8.38□□□□□ -1.07
HERC1-208ENST00000560462 KDM4AO75164 1064 aa8.38□□□□□ -1.07
HERC1-208ENST00000560462 CSF2RAP15509 400 aa8.38□□□□□ -1.07
HERC1-208ENST00000560462 FAAP100Q0VG06 881 aa8.38□□□□□ -1.07
HERC1-208ENST00000560462 TREML2Q5T2D2 321 aa8.38□□□□□ -1.07
HERC1-208ENST00000560462 TRIM67Q6ZTA4 783 aa8.38□□□□□ -1.07
HERC1-208ENST00000560462 TMEM199Q8N511 208 aa8.38□□□□□ -1.07
HERC1-208ENST00000560462 PNISRQ8TF01 805 aaKnown RBP8.38□□□□□ -1.07
HERC1-208ENST00000560462 USP6NLQ92738 828 aa8.38□□□□□ -1.07
HERC1-208ENST00000560462 CHAMP1Q96JM3 812 aa8.38□□□□□ -1.07
HERC1-208ENST00000560462 ISCA1Q9BUE6 129 aa8.38□□□□□ -1.07
HERC1-208ENST00000560462 TMOD2Q9NZR1 351 aa8.38□□□□□ -1.07
HERC1-208ENST00000560462 PRKAG3Q9UGI9 489 aa8.38□□□□□ -1.07
HERC1-208ENST00000560462 TTF2Q9UNY4 1162 aaKnown RBP8.38□□□□□ -1.07
HERC1-208ENST00000560462 AFG3L2Q9Y4W6 797 aa8.38□□□□□ -1.07
HERC1-208ENST00000560462 TECTAO75443 2155 aa8.37□□□□□ -1.07
HERC1-208ENST00000560462 SOBPA7XYQ1 873 aa8.37□□□□□ -1.07
HERC1-208ENST00000560462 DCDC2CA8MYV0 355 aa8.37□□□□□ -1.07
HERC1-208ENST00000560462 EIF2S2P20042 333 aaKnown RBP8.37□□□□□ -1.07
HERC1-208ENST00000560462 CRKP46108 304 aa8.37□□□□□ -1.07
HERC1-208ENST00000560462 KCNJ4P48050 445 aa8.37□□□□□ -1.07
HERC1-208ENST00000560462 METTL3Q86U44 580 aaKnown RBP8.37□□□□□ -1.07
HERC1-208ENST00000560462 PROCA1Q8NCQ7 364 aaPredicted RBP8.37□□□□□ -1.07
HERC1-208ENST00000560462 TDRD7Q8NHU6 1098 aaKnown RBP8.37□□□□□ -1.07
HERC1-208ENST00000560462 ARNTL2Q8WYA1 636 aa8.37□□□□□ -1.07
HERC1-208ENST00000560462 POM121Q96HA1 1249 aa8.37□□□□□ -1.07
HERC1-208ENST00000560462 PICK1Q9NRD5 415 aa8.37□□□□□ -1.07
HERC1-208ENST00000560462 MORF4L1Q9UBU8 362 aa8.37□□□□□ -1.07
HERC1-208ENST00000560462 BRWD1Q9NSI6 2320 aa8.37□□□□□ -1.07
HERC1-208ENST00000560462 TRIM75PA6NK02 468 aa8.36□□□□□ -1.07
HERC1-208ENST00000560462 CA3P07451 260 aa8.36□□□□□ -1.07
HERC1-208ENST00000560462 PTPRAP18433 802 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms