RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 GREB1LQ9C091 1923 aaPredicted RBP15.85■□□□□ 0.13
SMAD3-213ENST00000560175 ROBO3Q96MS0 1386 aa15.85■□□□□ 0.13
SMAD3-213ENST00000560175 GCLCP48506 637 aaPredicted RBP15.84■□□□□ 0.13
SMAD3-213ENST00000560175 USP14P54578 494 aa15.84■□□□□ 0.13
SMAD3-213ENST00000560175 KIF22Q14807 665 aa15.84■□□□□ 0.13
SMAD3-213ENST00000560175 SEPT2Q15019 361 aa15.84■□□□□ 0.13
SMAD3-213ENST00000560175 TMEM179Q6ZVK1 233 aa15.84■□□□□ 0.13
SMAD3-213ENST00000560175 AMOTL1Q8IY63 956 aa15.84■□□□□ 0.13
SMAD3-213ENST00000560175 IFNL3Q8IZI9 196 aa15.84■□□□□ 0.13
SMAD3-213ENST00000560175 ACER1Q8TDN7 264 aa15.84■□□□□ 0.13
SMAD3-213ENST00000560175 TRIM47Q96LD4 638 aa15.84■□□□□ 0.13
SMAD3-213ENST00000560175 TMOD4Q9NZQ9 345 aa15.84■□□□□ 0.13
SMAD3-213ENST00000560175 A0A1W2PRG0 241 aa15.83■□□□□ 0.12
SMAD3-213ENST00000560175 FOXP2O15409 715 aa15.83■□□□□ 0.12
SMAD3-213ENST00000560175 OSBPP22059 807 aa15.83■□□□□ 0.12
SMAD3-213ENST00000560175 PSMC4P43686 418 aa15.83■□□□□ 0.12
SMAD3-213ENST00000560175 RAB3GAP1Q15042 981 aa15.83■□□□□ 0.12
SMAD3-213ENST00000560175 FAM110CQ1W6H9 321 aa15.83■□□□□ 0.12
SMAD3-213ENST00000560175 ARMC5Q96C12 935 aa15.83■□□□□ 0.12
SMAD3-213ENST00000560175 HELLSQ9NRZ9 838 aa15.83■□□□□ 0.12
SMAD3-213ENST00000560175 MORF4L1Q9UBU8 362 aa15.83■□□□□ 0.12
SMAD3-213ENST00000560175 AKR1B1P15121 316 aa15.82■□□□□ 0.12
SMAD3-213ENST00000560175 POTEEQ6S8J3 1075 aa15.82■□□□□ 0.12
SMAD3-213ENST00000560175 SMCR8Q8TEV9 937 aaPredicted RBP15.82■□□□□ 0.12
SMAD3-213ENST00000560175 P2RX7Q99572 595 aaKnown RBP15.82■□□□□ 0.12
SMAD3-213ENST00000560175 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.82■□□□□ 0.12
SMAD3-213ENST00000560175 SRRDQ9UH36 339 aa15.82■□□□□ 0.12
SMAD3-213ENST00000560175 RLFQ13129 1914 aa15.82■□□□□ 0.12
SMAD3-213ENST00000560175 BRCA2P51587 3418 aa15.81■□□□□ 0.12
SMAD3-213ENST00000560175 HOXD10P28358 340 aa15.81■□□□□ 0.12
SMAD3-213ENST00000560175 ALX1Q15699 326 aa15.81■□□□□ 0.12
SMAD3-213ENST00000560175 LBX2Q6XYB7 198 aa15.81■□□□□ 0.12
SMAD3-213ENST00000560175 CATSPERGQ6ZRH7 1159 aa15.81■□□□□ 0.12
SMAD3-213ENST00000560175 TMX2Q9Y320 296 aa15.81■□□□□ 0.12
SMAD3-213ENST00000560175 RBBP6Q7Z6E9 1792 aaKnown RBP15.8■□□□□ 0.12
SMAD3-213ENST00000560175 USP17L15C9J2P7 530 aa15.8■□□□□ 0.12
SMAD3-213ENST00000560175 USP17L13C9JLJ4 530 aa15.8■□□□□ 0.12
SMAD3-213ENST00000560175 USP17L11C9JVI0 530 aa15.8■□□□□ 0.12
SMAD3-213ENST00000560175 USP17L18D6R9N7 530 aa15.8■□□□□ 0.12
SMAD3-213ENST00000560175 USP17L22D6RA61 530 aa15.8■□□□□ 0.12
SMAD3-213ENST00000560175 USP17L17D6RBQ6 530 aa15.8■□□□□ 0.12
SMAD3-213ENST00000560175 USP17L19D6RCP7 530 aa15.8■□□□□ 0.12
SMAD3-213ENST00000560175 USP17L20D6RJB6 530 aa15.8■□□□□ 0.12
SMAD3-213ENST00000560175 RASA1P20936 1047 aa15.8■□□□□ 0.12
SMAD3-213ENST00000560175 FCGRTP55899 365 aa15.8■□□□□ 0.12
SMAD3-213ENST00000560175 HERVK_113P62684 666 aa15.8■□□□□ 0.12
SMAD3-213ENST00000560175 IRX6P78412 446 aaPredicted RBP15.8■□□□□ 0.12
SMAD3-213ENST00000560175 USP17L24Q0WX57 530 aa15.8■□□□□ 0.12
SMAD3-213ENST00000560175 ANKRD13CQ8N6S4 541 aa15.8■□□□□ 0.12
SMAD3-213ENST00000560175 RBPJLQ9UBG7 517 aa15.8■□□□□ 0.12
SMAD3-213ENST00000560175 PTCH2Q9Y6C5 1203 aa15.8■□□□□ 0.12
SMAD3-213ENST00000560175 KIAA0100Q14667 2235 aaKnown RBP15.8■□□□□ 0.12
SMAD3-213ENST00000560175 VCAM1P19320 739 aa15.79■□□□□ 0.12
SMAD3-213ENST00000560175 PDE4AP27815 886 aa15.79■□□□□ 0.12
SMAD3-213ENST00000560175 MCMDC2Q4G0Z9 681 aa15.79■□□□□ 0.12
SMAD3-213ENST00000560175 GTF3C2Q8WUA4 911 aaPredicted RBP15.79■□□□□ 0.12
SMAD3-213ENST00000560175 NACAP1Q9BZK3 213 aa15.79■□□□□ 0.12
SMAD3-213ENST00000560175 KANSL2Q9H9L4 492 aa15.79■□□□□ 0.12
SMAD3-213ENST00000560175 IGKV6D-41A0A0C4DH26 115 aa15.78■□□□□ 0.12
SMAD3-213ENST00000560175 A0A0D9SFI3 127 aa15.78■□□□□ 0.12
SMAD3-213ENST00000560175 MINDY4BA8MYZ0 360 aa15.78■□□□□ 0.12
SMAD3-213ENST00000560175 MPHOSPH10O00566 681 aaKnown RBP15.78■□□□□ 0.12
SMAD3-213ENST00000560175 FMNL1O95466 1100 aaPredicted RBP15.78■□□□□ 0.12
SMAD3-213ENST00000560175 FGRP09769 529 aa15.78■□□□□ 0.12
SMAD3-213ENST00000560175 IRX3P78415 501 aaPredicted RBP15.78■□□□□ 0.12
SMAD3-213ENST00000560175 KIAA1755Q5JYT7 1200 aa15.78■□□□□ 0.12
SMAD3-213ENST00000560175 CCDC129Q6ZRS4 1044 aa15.78■□□□□ 0.12
SMAD3-213ENST00000560175 LPAR1Q92633 364 aa15.78■□□□□ 0.12
SMAD3-213ENST00000560175 ZNF333Q96JL9 665 aa15.78■□□□□ 0.12
SMAD3-213ENST00000560175 FAM227BQ96M60 508 aa15.78■□□□□ 0.12
SMAD3-213ENST00000560175 TXNRD2Q9NNW7 524 aa15.78■□□□□ 0.12
SMAD3-213ENST00000560175 ANAPC4Q9UJX5 808 aa15.78■□□□□ 0.12
SMAD3-213ENST00000560175 GJD2Q9UKL4 321 aa15.78■□□□□ 0.12
SMAD3-213ENST00000560175 PLXNB2O15031 1838 aa15.78■□□□□ 0.12
SMAD3-213ENST00000560175 PARP14Q460N5 1801 aa15.78■□□□□ 0.12
SMAD3-213ENST00000560175 APPP05067 770 aa15.77■□□□□ 0.12
SMAD3-213ENST00000560175 SDSP20132 328 aa15.77■□□□□ 0.12
SMAD3-213ENST00000560175 TDO2P48775 406 aa15.77■□□□□ 0.12
SMAD3-213ENST00000560175 ICA1Q05084 483 aa15.77■□□□□ 0.12
SMAD3-213ENST00000560175 IRF5Q13568 498 aa15.77■□□□□ 0.12
SMAD3-213ENST00000560175 Q3C1V9 767 aa15.77■□□□□ 0.12
SMAD3-213ENST00000560175 VPS53Q5VIR6 699 aa15.77■□□□□ 0.12
SMAD3-213ENST00000560175 NBPF11Q86T75 865 aa15.77■□□□□ 0.12
SMAD3-213ENST00000560175 FEZ1Q99689 392 aa15.77■□□□□ 0.12
SMAD3-213ENST00000560175 VCPKMTQ9H867 229 aa15.77■□□□□ 0.12
SMAD3-213ENST00000560175 ZNF287Q9HBT7 754 aa15.77■□□□□ 0.12
SMAD3-213ENST00000560175 ARHGEF10LQ9HCE6 1279 aa15.77■□□□□ 0.12
SMAD3-213ENST00000560175 NYAP2Q9P242 653 aa15.77■□□□□ 0.12
SMAD3-213ENST00000560175 GABRQQ9UN88 632 aa15.77■□□□□ 0.12
SMAD3-213ENST00000560175 RABGAP1Q9Y3P9 1069 aa15.77■□□□□ 0.12
SMAD3-213ENST00000560175 ZMYM6O95789 1325 aa15.76■□□□□ 0.11
SMAD3-213ENST00000560175 MYPNQ86TC9 1320 aa15.76■□□□□ 0.11
SMAD3-213ENST00000560175 TRIM6-TRIM34B2RNG4 842 aa15.76■□□□□ 0.11
SMAD3-213ENST00000560175 EEF2P13639 858 aaKnown RBP15.76■□□□□ 0.11
SMAD3-213ENST00000560175 PRKCZQ05513 592 aa15.76■□□□□ 0.11
SMAD3-213ENST00000560175 PPARAQ07869 468 aa15.76■□□□□ 0.11
SMAD3-213ENST00000560175 NMIQ13287 307 aaPredicted RBP15.76■□□□□ 0.11
SMAD3-213ENST00000560175 ZYXQ15942 572 aaKnown RBP15.76■□□□□ 0.11
SMAD3-213ENST00000560175 GPRC5AQ8NFJ5 357 aa15.76■□□□□ 0.11
SMAD3-213ENST00000560175 MKL1Q969V6 931 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms