RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 PDLIM2Q96JY6 352 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 FERD3LQ96RJ6 166 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 SLC30A3Q99726 388 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 PBX4Q9BYU1 374 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 SPC25Q9HBM1 224 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 NDFIP2Q9NV92 336 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 NOP53Q9NZM5 478 aaKnown RBP6.4□□□□□ -1.38
TPM1-222ENST00000560131 NOL7Q9UMY1 257 aaKnown RBP6.4□□□□□ -1.38
TPM1-222ENST00000560131 PCDHB5Q9Y5E4 795 aa6.4□□□□□ -1.38
TPM1-222ENST00000560131 NUP155O75694 1391 aa6.4□□□□□ -1.39
TPM1-222ENST00000560131 DISP3Q9P2K9 1392 aa6.4□□□□□ -1.39
TPM1-222ENST00000560131 C9orf84Q5VXU9 1444 aa6.4□□□□□ -1.39
TPM1-222ENST00000560131 MAGI2Q86UL8 1455 aa6.4□□□□□ -1.39
TPM1-222ENST00000560131 DUOX2Q9NRD8 1548 aa6.4□□□□□ -1.39
TPM1-222ENST00000560131 DNAJC6O75061 913 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 CILPO75339 1184 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 CT47B1P0C2W7 299 aaPredicted RBP6.39□□□□□ -1.39
TPM1-222ENST00000560131 IMPDH2P12268 514 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 HOXB4P17483 251 aaPredicted RBP6.39□□□□□ -1.39
TPM1-222ENST00000560131 ZNF445P59923 1031 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 GPLD1P80108 840 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 RBM10P98175 930 aaKnown RBP6.39□□□□□ -1.39
TPM1-222ENST00000560131 IFRD2Q12894 506 aaPredicted RBP6.39□□□□□ -1.39
TPM1-222ENST00000560131 LRRC14Q15048 493 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 FBXW10Q5XX13 1052 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 HSCBQ8IWL3 235 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 CELF2-AS1Q8N7Q2 184 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 APPBP2Q92624 585 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 ANP32BQ92688 251 aaKnown RBP6.39□□□□□ -1.39
TPM1-222ENST00000560131 DNAJC7Q99615 494 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 C22orf23Q9BZE7 217 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 RASSF4Q9H2L5 321 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 RWDD1Q9H446 243 aaPredicted RBP6.39□□□□□ -1.39
TPM1-222ENST00000560131 PANK3Q9H999 370 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 METTL14Q9HCE5 456 aaKnown RBP6.39□□□□□ -1.39
TPM1-222ENST00000560131 CWC22Q9HCG8 908 aaKnown RBP6.39□□□□□ -1.39
TPM1-222ENST00000560131 ACTR10Q9NZ32 417 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 HCN2Q9UL51 889 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 PRKAB1Q9Y478 270 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 COL4A3BPQ9Y5P4 624 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 KIF16BQ96L93 1317 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 UHRF1BP1LA0JNW5 1464 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 ADGRL1O94910 1474 aa6.39□□□□□ -1.39
TPM1-222ENST00000560131 ZBTB42B2RXF5 422 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 J3QW42 95 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 PDPK1O15530 556 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 MARCH6O60337 910 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 CDC45O75419 566 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 KIF20AO95235 890 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 HSP90AB1P08238 724 aaKnown RBP6.38□□□□□ -1.39
TPM1-222ENST00000560131 NME2P22392 152 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 MSNP26038 577 aaKnown RBP6.38□□□□□ -1.39
TPM1-222ENST00000560131 ZNF157P51786 506 aaPredicted RBP6.38□□□□□ -1.39
TPM1-222ENST00000560131 RASGRF1Q13972 1273 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 DDR2Q16832 855 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 RSPO4Q2I0M5 234 aaPredicted RBP6.38□□□□□ -1.39
TPM1-222ENST00000560131 KLHL40Q2TBA0 621 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 LCE1DQ5T752 114 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 GOLGA6L1Q8N7Z2 621 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 RBBP8NLQ8NC74 664 aaPredicted RBP6.38□□□□□ -1.39
TPM1-222ENST00000560131 BSNDQ8WZ55 320 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 PLD4Q96BZ4 506 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 GTPBP4Q9BZE4 634 aaKnown RBP6.38□□□□□ -1.39
TPM1-222ENST00000560131 MUC3BQ9H195 1237 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 CLEC4MQ9H2X3 399 aaPredicted RBP6.38□□□□□ -1.39
TPM1-222ENST00000560131 BRMS1Q9HCU9 246 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 ST7Q9NRC1 585 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 FANCLQ9NW38 375 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 POLR3AO14802 1390 aaPredicted RBP6.38□□□□□ -1.39
TPM1-222ENST00000560131 TTC37Q6PGP7 1564 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 MADDQ8WXG6 1647 aa6.38□□□□□ -1.39
TPM1-222ENST00000560131 KDM5AP29375 1690 aaKnown RBP6.38□□□□□ -1.39
TPM1-222ENST00000560131 USP32Q8NFA0 1604 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 IQSEC2Q5JU85 1478 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 ZNF644Q9H582 1327 aaPredicted RBP6.37□□□□□ -1.39
TPM1-222ENST00000560131 GHRHP01286 108 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 CASP7P55210 303 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 DMTNQ08495 405 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 HDAC1Q13547 482 aaPredicted RBP6.37□□□□□ -1.39
TPM1-222ENST00000560131 PCSK7Q16549 785 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 FXNQ16595 210 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 ARSHQ5FYA8 562 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 TAF3Q5VWG9 929 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 REC114Q7Z4M0 266 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 HOMER1Q86YM7 354 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 MICAL1Q8TDZ2 1067 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 POP1Q99575 1024 aaKnown RBP6.37□□□□□ -1.39
TPM1-222ENST00000560131 RBSNQ9H1K0 784 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 KANSL2Q9H9L4 492 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 PCDH12Q9NPG4 1184 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 CFDP1Q9UEE9 299 aaPredicted RBP6.37□□□□□ -1.39
TPM1-222ENST00000560131 ZNRF3Q9ULT6 936 aa6.37□□□□□ -1.39
TPM1-222ENST00000560131 SPHKAPQ2M3C7 1700 aa6.36□□□□□ -1.39
TPM1-222ENST00000560131 SHPRHQ149N8 1683 aa6.36□□□□□ -1.39
TPM1-222ENST00000560131 PLA2R1Q13018 1463 aa6.36□□□□□ -1.39
TPM1-222ENST00000560131 ESYT3A0FGR9 886 aa6.36□□□□□ -1.39
TPM1-222ENST00000560131 GOLGA6L22H0YM25 854 aa6.36□□□□□ -1.39
TPM1-222ENST00000560131 BPNT1O95861 308 aa6.36□□□□□ -1.39
TPM1-222ENST00000560131 CD33P20138 364 aa6.36□□□□□ -1.39
TPM1-222ENST00000560131 ARNTP27540 789 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms