RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 MYL10Q9BUA6 226 aa14.26□□□□□ -0.13
HERC1-205ENST00000559886 MTMR4Q9NYA4 1195 aa14.26□□□□□ -0.13
HERC1-205ENST00000559886 TROAPQ12815 778 aa14.25□□□□□ -0.13
HERC1-205ENST00000559886 MIGA2Q7L4E1 593 aa14.25□□□□□ -0.13
HERC1-205ENST00000559886 RAB11FIP4Q86YS3 637 aa14.25□□□□□ -0.13
HERC1-205ENST00000559886 ZC3H15Q8WU90 426 aaKnown RBP14.25□□□□□ -0.13
HERC1-205ENST00000559886 TAF1DQ9H5J8 278 aaPredicted RBP14.25□□□□□ -0.13
HERC1-205ENST00000559886 STX8Q9UNK0 236 aa14.25□□□□□ -0.13
HERC1-205ENST00000559886 MPHOSPH10O00566 681 aaKnown RBP14.25□□□□□ -0.13
HERC1-205ENST00000559886 DHX16O60231 1041 aaKnown RBP14.25□□□□□ -0.13
HERC1-205ENST00000559886 RXRAP19793 462 aa14.25□□□□□ -0.13
HERC1-205ENST00000559886 RRP1BQ14684 758 aaKnown RBP14.25□□□□□ -0.13
HERC1-205ENST00000559886 ABCB5Q2M3G0 1257 aa14.25□□□□□ -0.13
HERC1-205ENST00000559886 TMEM47Q9BQJ4 181 aa14.25□□□□□ -0.13
HERC1-205ENST00000559886 KAT14Q9H8E8 782 aa14.25□□□□□ -0.13
HERC1-205ENST00000559886 SMC3Q9UQE7 1217 aa14.25□□□□□ -0.13
HERC1-205ENST00000559886 ATAD5Q96QE3 1844 aa14.24□□□□□ -0.13
HERC1-205ENST00000559886 GOLGA8AA7E2F4 631 aa14.24□□□□□ -0.13
HERC1-205ENST00000559886 DDAH1O94760 285 aa14.24□□□□□ -0.13
HERC1-205ENST00000559886 CTDNEP1O95476 244 aa14.24□□□□□ -0.13
HERC1-205ENST00000559886 CALM1P0DP23 149 aa14.24□□□□□ -0.13
HERC1-205ENST00000559886 CALM2P0DP24 149 aa14.24□□□□□ -0.13
HERC1-205ENST00000559886 CALM3P0DP25 149 aa14.24□□□□□ -0.13
HERC1-205ENST00000559886 NBPF12Q5TAG4 269 aaPredicted RBP14.24□□□□□ -0.13
HERC1-205ENST00000559886 TMEM179Q6ZVK1 233 aa14.24□□□□□ -0.13
HERC1-205ENST00000559886 DCPSQ96C86 337 aaKnown RBP14.24□□□□□ -0.13
HERC1-205ENST00000559886 FAM217BQ9NTX9 383 aaPredicted RBP14.24□□□□□ -0.13
HERC1-205ENST00000559886 TOP1P11387 765 aaKnown RBP14.24□□□□□ -0.13
HERC1-205ENST00000559886 PPP2R5BQ15173 497 aa14.24□□□□□ -0.13
HERC1-205ENST00000559886 SHROOM1Q2M3G4 852 aaPredicted RBP14.24□□□□□ -0.13
HERC1-205ENST00000559886 PPP4R3BQ5MIZ7 849 aa14.24□□□□□ -0.13
HERC1-205ENST00000559886 FANCBQ8NB91 859 aa14.24□□□□□ -0.13
HERC1-205ENST00000559886 PNMA1Q8ND90 353 aa14.24□□□□□ -0.13
HERC1-205ENST00000559886 NSUN7Q8NE18 718 aaKnown RBP14.24□□□□□ -0.13
HERC1-205ENST00000559886 HOOK2Q96ED9 719 aa14.24□□□□□ -0.13
HERC1-205ENST00000559886 GDF11O95390 407 aa14.23□□□□□ -0.13
HERC1-205ENST00000559886 TTLL1O95922 423 aa14.23□□□□□ -0.13
HERC1-205ENST00000559886 CDC27P30260 824 aa14.23□□□□□ -0.13
HERC1-205ENST00000559886 JAG1P78504 1218 aa14.23□□□□□ -0.13
HERC1-205ENST00000559886 CCDC144CPQ8IYA2 1237 aa14.23□□□□□ -0.13
HERC1-205ENST00000559886 SMARCC2Q8TAQ2 1214 aa14.23□□□□□ -0.13
HERC1-205ENST00000559886 NUP133Q8WUM0 1156 aa14.23□□□□□ -0.13
HERC1-205ENST00000559886 KANSL2Q9H9L4 492 aa14.23□□□□□ -0.13
HERC1-205ENST00000559886 CIZ1Q9ULV3 898 aaPredicted RBP14.23□□□□□ -0.13
HERC1-205ENST00000559886 PHF20L1A8MW92 1017 aa14.23□□□□□ -0.13
HERC1-205ENST00000559886 GUCY1A2P33402 732 aa14.23□□□□□ -0.13
HERC1-205ENST00000559886 ADD1P35611 737 aaKnown RBP14.23□□□□□ -0.13
HERC1-205ENST00000559886 RTN1Q16799 776 aa14.23□□□□□ -0.13
HERC1-205ENST00000559886 PNMA8AQ86V59 439 aaPredicted RBP14.23□□□□□ -0.13
HERC1-205ENST00000559886 CABP5Q9NP86 173 aa14.23□□□□□ -0.13
HERC1-205ENST00000559886 CCDC196A0A1B0GTZ2 297 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 JAK2O60674 1132 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 DTNBO60941 627 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 GH2P01242 217 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 GJB2P29033 226 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 SEPT2Q15019 361 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 DCAF15Q66K64 600 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 CLEC10AQ8IUN9 316 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 SULF1Q8IWU6 871 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 MAP3K14Q99558 947 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 CHMP5Q9NZZ3 219 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 CPLX1O14810 134 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 CAP2P40123 477 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 NTRK3Q16288 839 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 PRAMEF18Q5VWM3 479 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 NYAP2Q9P242 653 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 CLIP2Q9UDT6 1046 aa14.22□□□□□ -0.13
HERC1-205ENST00000559886 MYH6P13533 1939 aa14.21□□□□□ -0.13
HERC1-205ENST00000559886 PTPDC1A2A3K4 754 aa14.21□□□□□ -0.13
HERC1-205ENST00000559886 HMGN5P82970 282 aaKnown RBP14.21□□□□□ -0.13
HERC1-205ENST00000559886 SUPT20HL1Q3ZLR7 823 aa14.21□□□□□ -0.13
HERC1-205ENST00000559886 MKL1Q969V6 931 aa14.21□□□□□ -0.13
HERC1-205ENST00000559886 ZBTB21Q9ULJ3 1066 aa14.21□□□□□ -0.13
HERC1-205ENST00000559886 SSC5DA1L4H1 1573 aa14.21□□□□□ -0.13
HERC1-205ENST00000559886 EAPPQ56P03 285 aaPredicted RBP14.21□□□□□ -0.13
HERC1-205ENST00000559886 CPLX2Q6PUV4 134 aaKnown RBP14.21□□□□□ -0.13
HERC1-205ENST00000559886 KRT26Q7Z3Y9 468 aa14.21□□□□□ -0.13
HERC1-205ENST00000559886 SIAH1Q8IUQ4 282 aa14.21□□□□□ -0.13
HERC1-205ENST00000559886 RBM28Q9NW13 759 aaKnown RBP14.21□□□□□ -0.13
HERC1-205ENST00000559886 CDKL5O76039 1030 aa14.2□□□□□ -0.14
HERC1-205ENST00000559886 EEF2P13639 858 aaKnown RBP14.2□□□□□ -0.14
HERC1-205ENST00000559886 ICA1Q05084 483 aa14.2□□□□□ -0.14
HERC1-205ENST00000559886 RAB3GAP1Q15042 981 aa14.2□□□□□ -0.14
HERC1-205ENST00000559886 CTCFLQ8NI51 663 aaPredicted RBP14.2□□□□□ -0.14
HERC1-205ENST00000559886 ZNF341Q9BYN7 854 aa14.2□□□□□ -0.14
HERC1-205ENST00000559886 ZNF112Q9UJU3 913 aa14.2□□□□□ -0.14
HERC1-205ENST00000559886 DOCK1Q14185 1865 aa14.2□□□□□ -0.14
HERC1-205ENST00000559886 ADM5C9JUS6 153 aa14.2□□□□□ -0.14
HERC1-205ENST00000559886 VEGFAP15692 232 aaPredicted RBP14.2□□□□□ -0.14
HERC1-205ENST00000559886 IFNAR1P17181 557 aa14.2□□□□□ -0.14
HERC1-205ENST00000559886 KIF5BP33176 963 aa14.2□□□□□ -0.14
HERC1-205ENST00000559886 GRM4Q14833 912 aa14.2□□□□□ -0.14
HERC1-205ENST00000559886 GINM1Q9NU53 330 aa14.2□□□□□ -0.14
HERC1-205ENST00000559886 CTNND1O60716 968 aaKnown RBP14.19□□□□□ -0.14
HERC1-205ENST00000559886 ASNSP08243 561 aa14.19□□□□□ -0.14
HERC1-205ENST00000559886 LRRC47Q8N1G4 583 aaKnown RBP14.19□□□□□ -0.14
HERC1-205ENST00000559886 DDX11Q96FC9 970 aa14.19□□□□□ -0.14
HERC1-205ENST00000559886 BAZ2BQ9UIF8 2168 aaKnown RBP14.19□□□□□ -0.14
HERC1-205ENST00000559886 FDPSP14324 419 aaKnown RBP14.19□□□□□ -0.14
HERC1-205ENST00000559886 ATP2B2Q01814 1243 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms